Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10667X
         (326 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    78   2e-17
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    23   0.71 
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          23   1.2  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          23   1.2  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          23   1.2  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          23   1.2  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          23   1.2  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          23   1.2  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    23   1.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   1.2  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   1.6  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   2.2  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   2.9  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   2.9  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   2.9  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   2.9  
AY340960-1|AAQ16586.1|   78|Apis mellifera apisimin precursor pr...    21   5.0  
AY055108-1|AAL15544.1|   78|Apis mellifera apisimin precursor pr...    21   5.0  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          20   6.6  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    20   6.6  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    20   8.8  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    20   8.8  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      20   8.8  

>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 78.2 bits (184), Expect = 2e-17
 Identities = 35/65 (53%), Positives = 46/65 (70%)
 Frame = +1

Query: 7   KNVNSEYPAIEVKGAYKYTSPDGQPIDLAYVADENGYQPQGSHLPTPHPIPEAIARALPY 186
           K V++E P +  +G+  YT+PDGQ + + YVADENG+Q QGSH+PT  PIP  I RAL +
Sbjct: 61  KQVDNETPVVS-QGSDSYTAPDGQQVSITYVADENGFQVQGSHIPTAPPIPPEIQRALEW 119

Query: 187 IDAHP 201
             AHP
Sbjct: 120 NAAHP 124


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 23.4 bits (48), Expect = 0.71
 Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
 Frame = +3

Query: 129 KPSXHPSPNSRGDR--PRSSLHRCPPPQPLRRGKKSRRQVVR 248
           +P  +P P S+G R  PRS   +  P   L   +   R++++
Sbjct: 53  EPRRNPGPGSKGPRDFPRSHRFKSLPRCQLSNKRDRSRELIK 94


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = +2

Query: 2   PSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNPREAI 136
           P  T    T   K++V    + L   P+T+   L R + NP + +
Sbjct: 115 PEGTQVSATELRKIKVDIHRV-LPGKPTTTSDELKRDIINPEDVM 158


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = +2

Query: 2   PSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNPREAI 136
           P  T    T   K++V    + L   P+T+   L R + NP + +
Sbjct: 115 PEGTQVSATELRKIKVDIHRV-LPGKPTTTSDELKRDIINPEDVM 158


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = +2

Query: 2   PSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNPREAI 136
           P  T    T   K++V    + L   P+T+   L R + NP + +
Sbjct: 115 PEGTQVSATELRKIKVDIHRV-LPGKPTTTSDELKRDIINPEDVM 158


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = +2

Query: 2   PSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNPREAI 136
           P  T    T   K++V    + L   P+T+   L R + NP + +
Sbjct: 115 PEGTQVSATELRKIKVDIHRV-LPGKPTTTSDELKRDIINPEDVM 158


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = +2

Query: 2   PSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNPREAI 136
           P  T    T   K++V    + L   P+T+   L R + NP + +
Sbjct: 115 PEGTQVSATELRKIKVDIHRV-LPGKPTTTSDELKRDIINPEDVM 158


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = +2

Query: 2   PSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNPREAI 136
           P  T    T   K++V    + L   P+T+   L R + NP + +
Sbjct: 115 PEGTQVSATELRKIKVDIHRV-LPGKPTTTSDELKRDIINPEDVM 158


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = +2

Query: 2   PSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNPREAI 136
           P  T    T   K++V    + L   P+T+   L R + NP + +
Sbjct: 115 PEGTQVSATELRKIKVDIHRV-LPGKPTTTSDELKRDIINPEDVM 158


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 11/31 (35%), Positives = 13/31 (41%)
 Frame = +3

Query: 144  PSPNSRGDRPRSSLHRCPPPQPLRRGKKSRR 236
            PSP+ RG     S     PP PL   +   R
Sbjct: 1379 PSPSDRGRNDDGSDRLTSPPTPLSISRAGSR 1409



 Score = 22.2 bits (45), Expect = 1.6
 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = +1

Query: 67   PDGQP-IDLAYVADENGYQPQGSHLPTPHPIPEAIARA 177
            P+  P +DL+    + G    GS   T  P P +I+RA
Sbjct: 1369 PERVPTVDLSPSPSDRGRNDDGSDRLTSPPTPLSISRA 1406


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +2

Query: 14  STQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 124
           S  N   +K+   +  LP+ DNP  S  +L     NP
Sbjct: 293 SRMNLTLAKMEKTSKPLPMVDNPE-STGNLVYIYNNP 328


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +1

Query: 139 PTPHPIPEAIARALPYIDAHPPSP 210
           P+PH  P+A  R  P   +  P P
Sbjct: 25  PSPHQSPQAPQRGSPPNPSQGPPP 48


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 11/27 (40%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
 Frame = +1

Query: 13  VNSEYPAIEVKGAYKYTSPDGQ--PID 87
           V +  P  E    Y+Y  PDG   PID
Sbjct: 269 VTAAIPTSENPADYRYFCPDGSKVPID 295


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 11/27 (40%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
 Frame = +1

Query: 13  VNSEYPAIEVKGAYKYTSPDGQ--PID 87
           V +  P  E    Y+Y  PDG   PID
Sbjct: 269 VTAAIPTSENPADYRYFCPDGSKVPID 295


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = +2

Query: 2   PSRTSTQNTPPSKLRVPTSTLP 67
           P   S   TP S +  P  TLP
Sbjct: 655 PRPISCHTTPDSFIEAPNKTLP 676


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 11/27 (40%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
 Frame = +1

Query: 13  VNSEYPAIEVKGAYKYTSPDGQ--PID 87
           V +  P  E    Y+Y  PDG   PID
Sbjct: 269 VTAAIPTSENPADYRYFCPDGSKVPID 295


>AY340960-1|AAQ16586.1|   78|Apis mellifera apisimin precursor
           protein.
          Length = 78

 Score = 20.6 bits (41), Expect = 5.0
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 117 VTVLVSDVGEVDGLSVRG 64
           V +LVSDV     +SV+G
Sbjct: 15  VAMLVSDVSAKTSISVKG 32


>AY055108-1|AAL15544.1|   78|Apis mellifera apisimin precursor
           protein.
          Length = 78

 Score = 20.6 bits (41), Expect = 5.0
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 117 VTVLVSDVGEVDGLSVRG 64
           V +LVSDV     +SV+G
Sbjct: 15  VAMLVSDVSAKTSISVKG 32


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2

Query: 47  VPTSTLPLTDNPSTSPTSLT 106
           VPT+T   T  PST+ TS T
Sbjct: 379 VPTTTASPTTEPSTT-TSTT 397


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +2

Query: 83  STSPTSLTRTVTNPREAIXPPL 148
           +  PTS  R   N ++ + PP+
Sbjct: 453 NVQPTSKGRITLNSKDPLDPPV 474


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 195 PPPQPLRRGK 224
           PPP P+R G+
Sbjct: 376 PPPPPIRGGE 385


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = -1

Query: 245 NNLATTFLSTTEGLGGWASM*GRARAIASGI 153
           N    TFL   +G      + G  R IASG+
Sbjct: 718 NGSLDTFLRANDGKFQVLQLVGMLRGIASGM 748



 Score = 19.8 bits (39), Expect = 8.8
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 124 QGSHLPTPHPIPEAI 168
           +G  LP P   PEAI
Sbjct: 853 KGYRLPAPMDCPEAI 867


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = +1

Query: 127 GSHLPTPHPIPEAIARALPYIDAHPPSPSVVER 225
           G+HLP    + E+  R         P+P+ V++
Sbjct: 137 GNHLPFHEKLVESFPRGGSLPTPVTPTPTTVQQ 169


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,999
Number of Sequences: 438
Number of extensions: 1704
Number of successful extensions: 25
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7217694
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)