Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10663X
(526 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein. 220 2e-57
BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16 p... 220 2e-57
BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16 p... 220 2e-57
AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16 p... 220 2e-57
BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein. 133 4e-31
AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens ... 88 2e-17
AL365410-1|CAB96954.1| 198|Homo sapiens hypothetical protein pr... 30 4.3
BC054882-1|AAH54882.1| 204|Homo sapiens Unknown (protein for IM... 30 5.7
AL391827-3|CAI16232.1| 689|Homo sapiens novel protein protein. 30 5.7
AL391827-2|CAI16231.1| 198|Homo sapiens novel protein protein. 30 5.7
AL122010-1|CAI23556.1| 979|Homo sapiens discs, large (Drosophil... 29 10.0
>M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein.
Length = 146
Score = 220 bits (538), Expect = 2e-57
Identities = 103/141 (73%), Positives = 122/141 (86%)
Frame = +1
Query: 25 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 204
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 205 VDIRVTVKGGGHVAQV*LSDKLFRRL*SPSTRKYVDEASKKEIKDILVQYDRSLLVADPR 384
VDIRV VKGGGHVAQ+ + + +KYVDEASKKEIKDIL+QYDR+LLVADPR
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPR 125
Query: 385 RCEPKKFGGPXARARYQKSYR 447
RCE KKFGGP ARARYQKSYR
Sbjct: 126 RCESKKFGGPGARARYQKSYR 146
>BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 220 bits (538), Expect = 2e-57
Identities = 103/141 (73%), Positives = 122/141 (86%)
Frame = +1
Query: 25 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 204
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 205 VDIRVTVKGGGHVAQV*LSDKLFRRL*SPSTRKYVDEASKKEIKDILVQYDRSLLVADPR 384
VDIRV VKGGGHVAQ+ + + +KYVDEASKKEIKDIL+QYDR+LLVADPR
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPR 125
Query: 385 RCEPKKFGGPXARARYQKSYR 447
RCE KKFGGP ARARYQKSYR
Sbjct: 126 RCESKKFGGPGARARYQKSYR 146
>BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 220 bits (538), Expect = 2e-57
Identities = 103/141 (73%), Positives = 122/141 (86%)
Frame = +1
Query: 25 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 204
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 205 VDIRVTVKGGGHVAQV*LSDKLFRRL*SPSTRKYVDEASKKEIKDILVQYDRSLLVADPR 384
VDIRV VKGGGHVAQ+ + + +KYVDEASKKEIKDIL+QYDR+LLVADPR
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPR 125
Query: 385 RCEPKKFGGPXARARYQKSYR 447
RCE KKFGGP ARARYQKSYR
Sbjct: 126 RCESKKFGGPGARARYQKSYR 146
>AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 220 bits (538), Expect = 2e-57
Identities = 103/141 (73%), Positives = 122/141 (86%)
Frame = +1
Query: 25 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 204
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 205 VDIRVTVKGGGHVAQV*LSDKLFRRL*SPSTRKYVDEASKKEIKDILVQYDRSLLVADPR 384
VDIRV VKGGGHVAQ+ + + +KYVDEASKKEIKDIL+QYDR+LLVADPR
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPR 125
Query: 385 RCEPKKFGGPXARARYQKSYR 447
RCE KKFGGP ARARYQKSYR
Sbjct: 126 RCESKKFGGPGARARYQKSYR 146
>BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein.
Length = 152
Score = 133 bits (321), Expect = 4e-31
Identities = 58/76 (76%), Positives = 72/76 (94%)
Frame = +1
Query: 25 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 204
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 205 VDIRVTVKGGGHVAQV 252
VDIRV VKGGGHVAQ+
Sbjct: 66 VDIRVRVKGGGHVAQI 81
>AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens
cDNA FLJ40618 fis, clone THYMU2013089, moderately
similar to 40S RIBOSOMAL PROTEIN S16. ).
Length = 178
Score = 87.8 bits (208), Expect = 2e-17
Identities = 49/108 (45%), Positives = 67/108 (62%)
Frame = +1
Query: 28 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 207
+Q+VQ+F K+ A AV C+ G G +R+N PL+++ LQYKL E LLL KE+ + +
Sbjct: 18 LQSVQIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGM 77
Query: 208 DIRVTVKGGGHVAQV*LSDKLFRRL*SPSTRKYVDEASKKEIKDILVQ 351
DI V VKG GHV Q+ + + P KYVDEAS +EIKD L +
Sbjct: 78 DIHVRVKGSGHVVQIYAVLQYISKALVPCYPKYVDEAS-EEIKDTLTR 124
>AL365410-1|CAB96954.1| 198|Homo sapiens hypothetical protein
protein.
Length = 198
Score = 30.3 bits (65), Expect = 4.3
Identities = 12/20 (60%), Positives = 17/20 (85%), Gaps = 1/20 (5%)
Frame = +2
Query: 152 STNF-RNLSFCSARKNSLWS 208
S+NF +N+SFC R++SLWS
Sbjct: 49 SSNFEKNMSFCQIRRDSLWS 68
>BC054882-1|AAH54882.1| 204|Homo sapiens Unknown (protein for
IMAGE:6451327) protein.
Length = 204
Score = 29.9 bits (64), Expect = 5.7
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +1
Query: 316 ASKKEIKD-ILVQYDRSLLVADPRRCEPK 399
ASKK +K+ +++ YD + DP +C P+
Sbjct: 16 ASKKPLKEKVVLMYDEIFMTEDPSKCSPR 44
>AL391827-3|CAI16232.1| 689|Homo sapiens novel protein protein.
Length = 689
Score = 29.9 bits (64), Expect = 5.7
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +1
Query: 316 ASKKEIKD-ILVQYDRSLLVADPRRCEPK 399
ASKK +K+ +++ YD + DP +C P+
Sbjct: 16 ASKKPLKEKVVLMYDEIFMTEDPSKCSPR 44
>AL391827-2|CAI16231.1| 198|Homo sapiens novel protein protein.
Length = 198
Score = 29.9 bits (64), Expect = 5.7
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +1
Query: 316 ASKKEIKD-ILVQYDRSLLVADPRRCEPK 399
ASKK +K+ +++ YD + DP +C P+
Sbjct: 16 ASKKPLKEKVVLMYDEIFMTEDPSKCSPR 44
>AL122010-1|CAI23556.1| 979|Homo sapiens discs, large (Drosophila)
homolog-associated protein 3 protein.
Length = 979
Score = 29.1 bits (62), Expect = 10.0
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 204 GRHQSDSQGWWSCSTSL 254
GRHQ+ S GWWS +L
Sbjct: 251 GRHQAKSTGWWSSDDNL 267
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,363,204
Number of Sequences: 237096
Number of extensions: 1805161
Number of successful extensions: 3930
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3922
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5046825278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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