Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10657X
         (572 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    24   0.80 
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    24   0.80 
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    24   0.80 
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    23   1.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.4  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   2.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.3  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   9.9  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   9.9  

>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 135

 Score = 24.2 bits (50), Expect = 0.80
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +3

Query: 378 RFRTLLQNQKQIRAKSQSKGGSWLSQLFGRDESPQSNAQETE 503
           +FR LL+N+  +R +++ K     S++FG DE       ++E
Sbjct: 77  QFR-LLENKLGVRQENRVKYNQNYSKVFGNDEKALEQIAKSE 117


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 24.2 bits (50), Expect = 0.80
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +3

Query: 378 RFRTLLQNQKQIRAKSQSKGGSWLSQLFGRDESPQSNAQETE 503
           +FR LL+N+  +R +++ K     S++FG DE       ++E
Sbjct: 137 QFR-LLENKLGVRQENRVKYNQNYSKVFGNDEKALEQIAKSE 177


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 24.2 bits (50), Expect = 0.80
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +3

Query: 378 RFRTLLQNQKQIRAKSQSKGGSWLSQLFGRDESPQSNAQETE 503
           +FR LL+N+  +R +++ K     S++FG DE       ++E
Sbjct: 137 QFR-LLENKLGVRQENRVKYNQNYSKVFGNDEKALEQIAKSE 177


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 364 ATSSRASAPSCRTRSRLGQSPN 429
           +TSS AS+PS      L  SPN
Sbjct: 166 STSSSASSPSVTAAPHLRDSPN 187


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 261 ISPFPYDQVKAEIAKYPN 314
           +SPF  D    E+ KYP+
Sbjct: 130 VSPFRIDNESQELLKYPS 147


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 15/55 (27%), Positives = 26/55 (47%)
 Frame = +3

Query: 366 YIEPRFRTLLQNQKQIRAKSQSKGGSWLSQLFGRDESPQSNAQETETVRAPLAIT 530
           +I P +   L +Q    + + ++G     + +  DE PQ    E ET+ +  AIT
Sbjct: 250 FIRPMYDAFLIDQ----SLALNRGRDENPRTYRSDEGPQITELEPETIESQDAIT 300


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +3

Query: 468 DESPQSNAQETETVRAPLAIT 530
           DE PQ    E ET+ +  AIT
Sbjct: 513 DEGPQITELEPETIESQDAIT 533


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +3

Query: 468 DESPQSNAQETETVRAPLAIT 530
           DE PQ    E ET+ +  AIT
Sbjct: 513 DEGPQITELEPETIESQDAIT 533


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -2

Query: 487 LLCGLSSRPNSWLNQLPPFDWDF 419
           + C  S+     L  LPPF W F
Sbjct: 306 IYCLFSTHFCRTLGSLPPFKWLF 328


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 12/48 (25%), Positives = 22/48 (45%)
 Frame = +3

Query: 264 SPFPYDQVKAEIAKYPNAQLVWSQEEHKNMGSWSYIEPRFRTLLQNQK 407
           +PF   Q+ A   K+ + Q +   E  +   S    EP+ +   QN++
Sbjct: 120 TPFTTQQLLALEKKFRDKQYLSIAERAEFSSSLRLTEPQVKIWFQNRR 167


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,506
Number of Sequences: 336
Number of extensions: 2073
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)