Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10657X
         (572 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039040-6|AAB94185.2| 1029|Caenorhabditis elegans Hypothetical ...   103   9e-23
Z78201-4|CAB01590.2|  911|Caenorhabditis elegans Hypothetical pr...    65   3e-11
Z78019-10|CAE46691.1|  911|Caenorhabditis elegans Hypothetical p...    65   3e-11
Z83104-2|CAB54203.1|  563|Caenorhabditis elegans Hypothetical pr...    28   5.4  
Z83104-1|CAB54204.1|  573|Caenorhabditis elegans Hypothetical pr...    28   5.4  

>AF039040-6|AAB94185.2| 1029|Caenorhabditis elegans Hypothetical
            protein T22B11.5 protein.
          Length = 1029

 Score =  103 bits (247), Expect = 9e-23
 Identities = 40/82 (48%), Positives = 62/82 (75%)
 Frame = +1

Query: 1    IALPFRKPLILMTPKSLLRHPECKSSFDDMKEGTNFKRVIPEEGPASENPQNVRKLAFCS 180
            + +PFRKP ++ +PKSLLRHP  +S  +D + G+NF+RVIPE G  S+NP +V+++ FC+
Sbjct: 848  VTMPFRKPAVVFSPKSLLRHPMARSPVEDFQSGSNFQRVIPETGAPSQNPPDVKRVVFCT 907

Query: 181  GRVYYDLLKQRRDKGLEKDIAI 246
            G+VYYD++  R+  G E D+A+
Sbjct: 908  GKVYYDMVAARKHVGKENDVAL 929



 Score = 74.9 bits (176), Expect = 4e-14
 Identities = 28/47 (59%), Positives = 39/47 (82%)
 Frame = +3

Query: 255  EQISPFPYDQVKAEIAKYPNAQLVWSQEEHKNMGSWSYIEPRFRTLL 395
            EQ+SPFPYD V+ E  KY  A+++W+QEEHKNMG+WS+++PR  +LL
Sbjct: 933  EQLSPFPYDLVQQECRKYQGAEILWAQEEHKNMGAWSFVQPRINSLL 979


>Z78201-4|CAB01590.2|  911|Caenorhabditis elegans Hypothetical
           protein ZK836.2 protein.
          Length = 911

 Score = 65.3 bits (152), Expect = 3e-11
 Identities = 31/78 (39%), Positives = 51/78 (65%)
 Frame = +1

Query: 13  FRKPLILMTPKSLLRHPECKSSFDDMKEGTNFKRVIPEEGPASENPQNVRKLAFCSGRVY 192
           +RKPLI++ PK LLRHP+  S+ ++   GT ++ VI EE   S   Q ++K+ F SG+ +
Sbjct: 749 YRKPLIVVGPKILLRHPKAASTINEFGPGTTYQNVISEEHATSS--QKIKKVIFVSGKHW 806

Query: 193 YDLLKQRRDKGLEKDIAI 246
            ++ K R ++GL+  +AI
Sbjct: 807 INVEKARDERGLKDSVAI 824



 Score = 57.2 bits (132), Expect = 8e-09
 Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
 Frame = +3

Query: 255 EQISPFPYDQVKAEIAKYPNAQ-LVWSQEEHKNMGSWSYIEPRFRTLL 395
           E + PFP   ++A + KYP AQ  VWSQEE +N G+WS++ PRF   L
Sbjct: 828 EMLCPFPVVDLQAVLKKYPGAQDFVWSQEEPRNAGAWSFVRPRFENAL 875


>Z78019-10|CAE46691.1|  911|Caenorhabditis elegans Hypothetical
           protein ZK836.2 protein.
          Length = 911

 Score = 65.3 bits (152), Expect = 3e-11
 Identities = 31/78 (39%), Positives = 51/78 (65%)
 Frame = +1

Query: 13  FRKPLILMTPKSLLRHPECKSSFDDMKEGTNFKRVIPEEGPASENPQNVRKLAFCSGRVY 192
           +RKPLI++ PK LLRHP+  S+ ++   GT ++ VI EE   S   Q ++K+ F SG+ +
Sbjct: 749 YRKPLIVVGPKILLRHPKAASTINEFGPGTTYQNVISEEHATSS--QKIKKVIFVSGKHW 806

Query: 193 YDLLKQRRDKGLEKDIAI 246
            ++ K R ++GL+  +AI
Sbjct: 807 INVEKARDERGLKDSVAI 824



 Score = 57.2 bits (132), Expect = 8e-09
 Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
 Frame = +3

Query: 255 EQISPFPYDQVKAEIAKYPNAQ-LVWSQEEHKNMGSWSYIEPRFRTLL 395
           E + PFP   ++A + KYP AQ  VWSQEE +N G+WS++ PRF   L
Sbjct: 828 EMLCPFPVVDLQAVLKKYPGAQDFVWSQEEPRNAGAWSFVRPRFENAL 875


>Z83104-2|CAB54203.1|  563|Caenorhabditis elegans Hypothetical
           protein F09B12.1b protein.
          Length = 563

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 3/39 (7%)
 Frame = -2

Query: 523 ANGARTVSVS*ALLCGLSSRPNSWLNQLPP---FDWDFA 416
           A G   V    AL C    RP  W N  PP    DW  A
Sbjct: 89  AEGGGPVRSGNALTCNFDGRPCCWANVPPPDDQLDWQIA 127


>Z83104-1|CAB54204.1|  573|Caenorhabditis elegans Hypothetical
           protein F09B12.1a protein.
          Length = 573

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 3/39 (7%)
 Frame = -2

Query: 523 ANGARTVSVS*ALLCGLSSRPNSWLNQLPP---FDWDFA 416
           A G   V    AL C    RP  W N  PP    DW  A
Sbjct: 99  AEGGGPVRSGNALTCNFDGRPCCWANVPPPDDQLDWQIA 137


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,183,451
Number of Sequences: 27780
Number of extensions: 208481
Number of successful extensions: 673
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 669
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)