Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10657X
         (572 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    23   2.8  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    21   8.7  
AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-lik...    21   8.7  

>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +1

Query: 334 RRSTRTWARGATSSRASAPSCRTRSRLGQSPN 429
           RRS    + G  SS +S  S R   R   SP+
Sbjct: 170 RRSVSECSLGTASSTSSTASSRNSDRSAGSPS 201


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +3

Query: 330 SQEEHKNMGSWSYIEPRFRTLLQNQKQIRAKSQSKGGS 443
           +QE+ KN+ SW  +E  F         I++ S   G S
Sbjct: 20  AQEKLKNIYSWKALEFAFPNGYAKLAAIKSGSYIPGAS 57


>AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-like
           protein protein.
          Length = 130

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 569 PSSRSLERRLWRD 531
           P  +  ERR+WRD
Sbjct: 104 PLEKLKERRIWRD 116


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,039
Number of Sequences: 438
Number of extensions: 2849
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16504155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)