Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10655
         (333 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   1.1  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   1.9  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   3.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   3.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   3.4  
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    21   4.5  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -2

Query: 122 FNFFPQFLNCFLRTLSQRIYAIVFFRSIS 36
           F   P+ +    +T  Q+ YA+ FF ++S
Sbjct: 16  FALTPRSIKLEKQTFIQKFYAVAFFLALS 44


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = -2

Query: 203 LQIFIKFVEAVYHRAKVFLNSLRGQGGFNFFPQFLNCFLRTL 78
           L IF   +E V      FL ++ GQG FN      N  L T+
Sbjct: 247 LVIFDCCLETVSALNGAFLYTINGQGQFNIEMFLCNMSLLTV 288


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 120 ESALAPETVKKNFGTMVDSFN 182
           +  LA  T+K+NF T ++  N
Sbjct: 686 DELLAQPTIKENFHTALEIMN 706


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +3

Query: 48   KEDNSINTLAESAKKTIEELREKVES 125
            K DN  N      ++++ +L  K+ES
Sbjct: 1093 KADNKENEQLRKIQESLRDLNRKIES 1118


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +3

Query: 48   KEDNSINTLAESAKKTIEELREKVES 125
            K DN  N      ++++ +L  K+ES
Sbjct: 1093 KADNKENEQLRKIQESLRDLNRKIES 1118


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 20.6 bits (41), Expect = 4.5
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 9   LANVHAFVKRDAPKEDNSI 65
           +  V AFV+++ PKE N I
Sbjct: 88  IQKVLAFVQKNYPKEWNKI 106


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,704
Number of Sequences: 336
Number of extensions: 1472
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6473381
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)