Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10649X
(580 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 94 2e-18
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 86 7e-16
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 86 7e-16
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 79 6e-14
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 77 3e-13
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 77 3e-13
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 77 4e-13
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 76 5e-13
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 75 2e-12
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 72 1e-11
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 70 3e-11
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 70 3e-11
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 69 6e-11
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 69 6e-11
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 69 6e-11
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 69 8e-11
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 69 8e-11
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 68 2e-10
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 67 3e-10
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 66 4e-10
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 65 1e-09
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 64 2e-09
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 64 2e-09
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 64 3e-09
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 62 1e-08
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 61 2e-08
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 61 2e-08
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 61 2e-08
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 61 2e-08
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 60 3e-08
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 59 6e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 6e-08
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 59 6e-08
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 59 9e-08
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 58 1e-07
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 58 1e-07
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 50 3e-05
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 50 3e-05
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 49 7e-05
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 49 9e-05
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 48 2e-04
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 48 2e-04
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 46 5e-04
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 44 0.002
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 42 0.014
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 41 0.018
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 41 0.024
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 40 0.042
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 40 0.056
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 39 0.074
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 39 0.098
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 39 0.098
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 38 0.17
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 37 0.39
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 37 0.39
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 37 0.39
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 36 0.91
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 35 1.2
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 35 1.2
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 35 1.6
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 34 2.1
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 33 3.7
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 33 3.7
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 33 4.9
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 33 6.4
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 33 6.4
UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;... 33 6.4
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 33 6.4
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 33 6.4
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 32 8.5
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 32 8.5
UniRef50_Q8ID15 Cluster: Putative uncharacterized protein MAL13P... 32 8.5
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 93.9 bits (223), Expect = 2e-18
Identities = 51/93 (54%), Positives = 58/93 (62%)
Frame = -3
Query: 293 KGGG*ESKSYIIYRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SS 114
K GG + RGNA+SGAP++ GTNQFPNPP KA AVT+ L I S
Sbjct: 126 KEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSF 184
Query: 113 PINDPGFPNSARIKSLKDVPIIPDQIPKIKYNV 15
PI PG PNSARIKSL DVP +P PK+KYNV
Sbjct: 185 PIKLPGCPNSARIKSLSDVPTMPAHAPKMKYNV 217
Score = 82.2 bits (194), Expect = 8e-15
Identities = 39/63 (61%), Positives = 46/63 (73%)
Frame = -1
Query: 436 DEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTILLEINNIREGGRSQNLILF 257
+E PAKC+EKI STD P CAI SGG TVHPVP P STI L + ++EGG +QNL+LF
Sbjct: 78 EETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQNLMLF 137
Query: 256 IVG 248
I G
Sbjct: 138 IRG 140
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 85.8 bits (203), Expect = 7e-16
Identities = 47/88 (53%), Positives = 49/88 (55%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P +NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAG
Sbjct: 92 PRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAG 151
Query: 429 ISSXXXXXXXXXXXXXXXXXXXSFDQFP 512
ISS SFDQ P
Sbjct: 152 ISSILGAINFITTIINMRMNNLSFDQMP 179
Score = 85.0 bits (201), Expect = 1e-15
Identities = 49/98 (50%), Positives = 51/98 (52%)
Frame = +1
Query: 1 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 180
HKDIGTLY AELG PGSLIGDDQIYNTIVTAHA
Sbjct: 9 HKDIGTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVM 68
Query: 181 XXXXXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPL 294
N LVPL+LGAPD+AFPR F PP L
Sbjct: 69 PIMIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPSL 106
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 85.8 bits (203), Expect = 7e-16
Identities = 47/88 (53%), Positives = 49/88 (55%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P +NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAG
Sbjct: 68 PRMNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAG 127
Query: 429 ISSXXXXXXXXXXXXXXXXXXXSFDQFP 512
ISS SFDQ P
Sbjct: 128 ISSILGAINFITTIINMRINKMSFDQMP 155
Score = 72.5 bits (170), Expect = 6e-12
Identities = 39/70 (55%), Positives = 42/70 (60%)
Frame = +1
Query: 85 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR*II 264
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+AFPR
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 265 *DFDSYPPPL 294
F PP L
Sbjct: 73 MSFWLLPPSL 82
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 79.4 bits (187), Expect = 6e-14
Identities = 41/85 (48%), Positives = 46/85 (54%)
Frame = +1
Query: 1 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 180
HKDIGTLY AELG PG+L+GDDQIYN IVTAHA
Sbjct: 13 HKDIGTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVM 72
Query: 181 XXXXXXXXN*LVPLILGAPDIAFPR 255
N LVPL++GAPD+AFPR
Sbjct: 73 PIMIGGFGNWLVPLMIGAPDMAFPR 97
Score = 73.7 bits (173), Expect = 3e-12
Identities = 38/63 (60%), Positives = 42/63 (66%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P +NN+ F VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHLAG
Sbjct: 96 PRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAG 155
Query: 429 ISS 437
ISS
Sbjct: 156 ISS 158
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 77.0 bits (181), Expect = 3e-13
Identities = 40/85 (47%), Positives = 45/85 (52%)
Frame = +1
Query: 1 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 180
HKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 12 HKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVM 71
Query: 181 XXXXXXXXN*LVPLILGAPDIAFPR 255
N LVPL++GAPD+AFPR
Sbjct: 72 PVMIGGFGNWLVPLMIGAPDMAFPR 96
Score = 70.5 bits (165), Expect = 3e-11
Identities = 35/63 (55%), Positives = 40/63 (63%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P +NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 154
Query: 429 ISS 437
+SS
Sbjct: 155 VSS 157
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 77.0 bits (181), Expect = 3e-13
Identities = 40/85 (47%), Positives = 45/85 (52%)
Frame = +1
Query: 1 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 180
HKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 12 HKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVM 71
Query: 181 XXXXXXXXN*LVPLILGAPDIAFPR 255
N LVPL++GAPD+AFPR
Sbjct: 72 PILIGGFGNWLVPLMIGAPDMAFPR 96
Score = 70.5 bits (165), Expect = 3e-11
Identities = 35/63 (55%), Positives = 40/63 (63%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P +NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 154
Query: 429 ISS 437
+SS
Sbjct: 155 VSS 157
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 76.6 bits (180), Expect = 4e-13
Identities = 39/85 (45%), Positives = 45/85 (52%)
Frame = +1
Query: 1 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 180
HKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 1 HKDIGTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVM 60
Query: 181 XXXXXXXXN*LVPLILGAPDIAFPR 255
N L+PL++GAPD+AFPR
Sbjct: 61 PIMIGGFGNWLIPLMIGAPDMAFPR 85
Score = 70.5 bits (165), Expect = 3e-11
Identities = 35/63 (55%), Positives = 40/63 (63%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P +NN+ F +E GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 84 PRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 143
Query: 429 ISS 437
ISS
Sbjct: 144 ISS 146
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 76.2 bits (179), Expect = 5e-13
Identities = 43/98 (43%), Positives = 49/98 (50%)
Frame = +1
Query: 1 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 180
HKDIGTLY AELG PG+L+G+D IYN IVTAHA
Sbjct: 12 HKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVM 71
Query: 181 XXXXXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPL 294
N LVPL++GAPD+AFPR F PP L
Sbjct: 72 PIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSL 109
Score = 69.7 bits (163), Expect = 5e-11
Identities = 34/63 (53%), Positives = 40/63 (63%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P +NN+ F +VE GAGTG TVYPPL+ N +H G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAG 154
Query: 429 ISS 437
+SS
Sbjct: 155 VSS 157
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 74.5 bits (175), Expect = 2e-12
Identities = 37/63 (58%), Positives = 41/63 (65%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P +NN+ F VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG
Sbjct: 78 PRLNNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAG 137
Query: 429 ISS 437
+SS
Sbjct: 138 VSS 140
Score = 66.1 bits (154), Expect = 6e-10
Identities = 35/70 (50%), Positives = 40/70 (57%)
Frame = +1
Query: 85 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR*II 264
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+AFPR
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82
Query: 265 *DFDSYPPPL 294
F PP L
Sbjct: 83 MSFWFLPPSL 92
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 71.7 bits (168), Expect = 1e-11
Identities = 39/99 (39%), Positives = 48/99 (48%)
Frame = +1
Query: 1 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 180
HKDIG+LY EL +PGS++GDD +YN IVTAHA
Sbjct: 13 HKDIGSLYLVFGALSGAIGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVM 72
Query: 181 XXXXXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPLY 297
N VPL++GAPD+AFPR F PP L+
Sbjct: 73 PTMIGGFGNWFVPLMIGAPDMAFPRLNNISFWLLPPALF 111
Score = 71.3 bits (167), Expect = 1e-11
Identities = 36/63 (57%), Positives = 41/63 (65%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P +NNI F +VE GAGTG TVYPPL+S AH G SVD+AIFSLHLAG
Sbjct: 96 PRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAG 155
Query: 429 ISS 437
+SS
Sbjct: 156 LSS 158
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 70.1 bits (164), Expect = 3e-11
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P INNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 96 PRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTS 155
Query: 429 ISS 437
ISS
Sbjct: 156 ISS 158
Score = 44.0 bits (99), Expect = 0.003
Identities = 28/86 (32%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 177
KDI LY EL PGS L G+ Q++N +V HA
Sbjct: 12 KDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLV 71
Query: 178 XXXXXXXXXN*LVPLILGAPDIAFPR 255
N L+PL++GA D AFPR
Sbjct: 72 MPALIGGFGNYLLPLMIGATDTAFPR 97
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 70.1 bits (164), Expect = 3e-11
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P INNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 96 PRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTS 155
Query: 429 ISS 437
ISS
Sbjct: 156 ISS 158
Score = 44.0 bits (99), Expect = 0.003
Identities = 28/86 (32%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 177
KDI LY EL PGS L G+ Q++N +V HA
Sbjct: 12 KDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLV 71
Query: 178 XXXXXXXXXN*LVPLILGAPDIAFPR 255
N L+PL++GA D AFPR
Sbjct: 72 MPALIGGFGNYLLPLMIGATDTAFPR 97
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 69.3 bits (162), Expect = 6e-11
Identities = 36/63 (57%), Positives = 39/63 (61%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P +NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 429 ISS 437
ISS
Sbjct: 155 ISS 157
Score = 58.0 bits (134), Expect = 1e-07
Identities = 38/99 (38%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 177
KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 178 XXXXXXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPL 294
N LVP+++GAPD+AFPR F PP L
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 69.3 bits (162), Expect = 6e-11
Identities = 36/63 (57%), Positives = 39/63 (61%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P +NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 429 ISS 437
ISS
Sbjct: 155 ISS 157
Score = 58.0 bits (134), Expect = 1e-07
Identities = 38/99 (38%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 177
KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 178 XXXXXXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPL 294
N LVP+++GAPD+AFPR F PP L
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 69.3 bits (162), Expect = 6e-11
Identities = 36/63 (57%), Positives = 39/63 (61%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P +NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 429 ISS 437
ISS
Sbjct: 155 ISS 157
Score = 58.0 bits (134), Expect = 1e-07
Identities = 38/99 (38%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 177
KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 178 XXXXXXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPL 294
N LVP+++GAPD+AFPR F PP L
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 68.9 bits (161), Expect = 8e-11
Identities = 40/85 (47%), Positives = 45/85 (52%)
Frame = +1
Query: 1 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 180
HKD GTL AELG PG+L+GDDQ N IVTAHA
Sbjct: 13 HKDXGTLXXIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXM 72
Query: 181 XXXXXXXXN*LVPLILGAPDIAFPR 255
N LVPL++GAPD+AFPR
Sbjct: 73 PIMIGGFGNWLVPLMIGAPDMAFPR 97
Score = 34.3 bits (75), Expect = 2.1
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 365
P +NN+ F VE GAGTG TVYPPL+
Sbjct: 96 PRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 68.9 bits (161), Expect = 8e-11
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P IN+I F +VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL
Sbjct: 96 PRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTS 155
Query: 429 ISS 437
ISS
Sbjct: 156 ISS 158
Score = 41.5 bits (93), Expect = 0.014
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 177
KDI +Y EL PGS L G+ Q++N +V HA
Sbjct: 12 KDISIMYFMLALFSGMAGSAMSMIIRMELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLA 71
Query: 178 XXXXXXXXXN*LVPLILGAPDIAFPR 255
N ++PL++GA D++FPR
Sbjct: 72 MPALIGGFGNYMLPLMIGATDMSFPR 97
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 67.7 bits (158), Expect = 2e-10
Identities = 35/63 (55%), Positives = 40/63 (63%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P INNI F +VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+
Sbjct: 96 PRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTS 155
Query: 429 ISS 437
ISS
Sbjct: 156 ISS 158
Score = 41.9 bits (94), Expect = 0.011
Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 177
KDI LY EL PG L G++Q++N +V HA
Sbjct: 12 KDIAVLYFLLALFSGMAGTAMSLIIRLELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMV 71
Query: 178 XXXXXXXXXN*LVPLILGAPDIAFPR 255
N ++PL++GA D AFPR
Sbjct: 72 MPALIGGFGNYMLPLMIGATDTAFPR 97
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 66.9 bits (156), Expect = 3e-10
Identities = 33/63 (52%), Positives = 40/63 (63%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P +NNI F +VE G+GTG TVYPPLS +H G +VDLAIFSLHL+G
Sbjct: 98 PRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSG 157
Query: 429 ISS 437
+SS
Sbjct: 158 VSS 160
Score = 59.7 bits (138), Expect = 5e-08
Identities = 36/100 (36%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Frame = +1
Query: 1 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXX 174
HKDIGTLY EL PG I G+ Q+YN ++TAHA
Sbjct: 13 HKDIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFM 72
Query: 175 XXXXXXXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPL 294
N VP+++GAPD+AFPR F PP L
Sbjct: 73 VMPAMIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSL 112
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 66.5 bits (155), Expect = 4e-10
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +3
Query: 318 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 437
VE GAGTG TV PPLS+NIAH G SVDLAIFSLH+AG+ S
Sbjct: 37 VEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMAGVXS 76
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 64.9 bits (151), Expect = 1e-09
Identities = 33/63 (52%), Positives = 39/63 (61%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P +NNI F +VE G GTG TVYPPLSS +H G +VDLAIFSLH++G
Sbjct: 103 PRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISG 162
Query: 429 ISS 437
SS
Sbjct: 163 ASS 165
Score = 60.1 bits (139), Expect = 4e-08
Identities = 36/100 (36%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Frame = +1
Query: 1 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXX 174
HKDIGTLY EL P + L+G+ QIYN ++TAHA
Sbjct: 18 HKDIGTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFFM 77
Query: 175 XXXXXXXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPL 294
N LVP+++G+PD+AFPR F PP L
Sbjct: 78 VMPVMIGGFGNWLVPIMIGSPDMAFPRLNNISFWLLPPSL 117
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 64.5 bits (150), Expect = 2e-09
Identities = 33/72 (45%), Positives = 40/72 (55%)
Frame = +1
Query: 85 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR*II 264
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+AFPR
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 265 *DFDSYPPPLYY 300
F +P +Y
Sbjct: 84 MSFGFFPLHWHY 95
Score = 33.1 bits (72), Expect = 4.9
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3
Query: 384 GRSVDLAIFSLHLAGISS 437
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 64.1 bits (149), Expect = 2e-09
Identities = 32/63 (50%), Positives = 38/63 (60%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P +NNI + +ENG GTG T+YPPLS +H G SVDLAIF LHL+G
Sbjct: 96 PRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSG 155
Query: 429 ISS 437
ISS
Sbjct: 156 ISS 158
Score = 52.8 bits (121), Expect = 6e-06
Identities = 31/85 (36%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXX 180
KDIG LY EL PG I D+Q+YN+I+TAHA
Sbjct: 13 KDIGVLYLIYALFAGLIGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIFFMVM 72
Query: 181 XXXXXXXXN*LVPLILGAPDIAFPR 255
N L+PL LG PD+ FPR
Sbjct: 73 PALIGGFGNFLLPLGLGGPDMGFPR 97
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 63.7 bits (148), Expect = 3e-09
Identities = 30/57 (52%), Positives = 38/57 (66%)
Frame = +1
Query: 85 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 255
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++FPR
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPR 80
Score = 60.9 bits (141), Expect = 2e-08
Identities = 31/63 (49%), Positives = 35/63 (55%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P +NN+ F + G GTG TVYPPLS + H G SVDL IFSLHLAG
Sbjct: 79 PRMNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAG 138
Query: 429 ISS 437
SS
Sbjct: 139 ASS 141
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 61.7 bits (143), Expect = 1e-08
Identities = 29/63 (46%), Positives = 36/63 (57%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P +NN+ + I+ENG GTG T+YPPLS +H VDL IF LHL+G
Sbjct: 122 PRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSG 181
Query: 429 ISS 437
ISS
Sbjct: 182 ISS 184
Score = 48.8 bits (111), Expect = 9e-05
Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXX 180
KDI LY EL PG I D+Q+YN+I+T+H
Sbjct: 39 KDIAILYLIFALFSGLLGTAFSVLIRLELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVM 98
Query: 181 XXXXXXXXN*LVPLILGAPDIAFPR 255
N L+P+++G PD+AFPR
Sbjct: 99 PALIGGFGNFLLPILIGGPDMAFPR 123
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/63 (42%), Positives = 40/63 (63%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P INN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 429 ISS 437
+SS
Sbjct: 173 LSS 175
Score = 39.5 bits (88), Expect = 0.056
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +1
Query: 94 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 255
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPR
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPR 114
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/63 (42%), Positives = 40/63 (63%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P INN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 429 ISS 437
+SS
Sbjct: 173 LSS 175
Score = 39.5 bits (88), Expect = 0.056
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +1
Query: 94 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 255
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPR
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPR 114
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/63 (42%), Positives = 40/63 (63%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P INN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 429 ISS 437
+SS
Sbjct: 173 LSS 175
Score = 39.5 bits (88), Expect = 0.056
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +1
Query: 94 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 255
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPR
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPR 114
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/63 (42%), Positives = 40/63 (63%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P INN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 429 ISS 437
+SS
Sbjct: 173 LSS 175
Score = 39.5 bits (88), Expect = 0.056
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +1
Query: 94 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 255
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPR
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPR 114
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 60.5 bits (140), Expect = 3e-08
Identities = 30/55 (54%), Positives = 34/55 (61%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 413
P +NN+ F +VENGAGTG TVYPPLSS AH G SVDLAI+S
Sbjct: 11 PRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 59.3 bits (137), Expect = 6e-08
Identities = 31/63 (49%), Positives = 33/63 (52%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P +NN F E G GTG TVYPPLSS +H G SVDL IFS HL G
Sbjct: 99 PRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVG 158
Query: 429 ISS 437
I S
Sbjct: 159 IGS 161
Score = 44.4 bits (100), Expect = 0.002
Identities = 27/87 (31%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXX 174
HK IG LY EL PG L G+ YN I T H
Sbjct: 14 HKRIGILYLFFGVFNGFLAVLLSMLMRLELAFPGDQILFGEYHFYNMITTVHGVLMLFVV 73
Query: 175 XXXXXXXXXXN*LVPLILGAPDIAFPR 255
N VP+++GAPD++FPR
Sbjct: 74 VMPILFGGFGNYFVPILIGAPDMSFPR 100
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 6e-08
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +3
Query: 315 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 437
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 59.3 bits (137), Expect = 6e-08
Identities = 32/67 (47%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV----YPPLSSNIAHRGRSVDLAIFSL 416
P +NNI F I+E G GTG T+ YPPLS +H G SVDLAIF+L
Sbjct: 124 PRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFAL 183
Query: 417 HLAGISS 437
HL+G+SS
Sbjct: 184 HLSGVSS 190
Score = 56.8 bits (131), Expect = 3e-07
Identities = 35/98 (35%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXX 180
KDIGTLY EL PG I ++Q+YN+I+TAHA
Sbjct: 41 KDIGTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFFMVM 100
Query: 181 XXXXXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPL 294
N L+PL++G PD+AFPR F PP L
Sbjct: 101 PALIGGFGNFLMPLMIGGPDMAFPRLNNISFWLLPPSL 138
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 58.8 bits (136), Expect = 9e-08
Identities = 35/100 (35%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Frame = +1
Query: 1 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXX 174
HKDIGTLY EL PG+ I G+ Q+YN ++TAHA
Sbjct: 14 HKDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFM 73
Query: 175 XXXXXXXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPL 294
N VP+++G+PD+AFPR F PP L
Sbjct: 74 VMPAMIGGFGNWFVPILIGSPDMAFPRLNNISFWLLPPSL 113
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 58.4 bits (135), Expect = 1e-07
Identities = 31/61 (50%), Positives = 37/61 (60%)
Frame = +3
Query: 255 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 434
+NNI F +VE GAGTG TVY PL+ +H G +VDLAIFSLHL+G S
Sbjct: 103 LNNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFS 162
Query: 435 S 437
S
Sbjct: 163 S 163
Score = 44.4 bits (100), Expect = 0.002
Identities = 29/86 (33%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 177
KDI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 17 KDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFV 76
Query: 178 XXXXXXXXXN*LVPLILGAPDIAFPR 255
N L+PL+LGA D+AF R
Sbjct: 77 MPALVGGFGNYLMPLMLGASDMAFAR 102
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 58.0 bits (134), Expect = 1e-07
Identities = 38/99 (38%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 177
KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 178 XXXXXXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPL 294
N LVP+++GAPD+AFPR F PP L
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 50.4 bits (115), Expect = 3e-05
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P +NN+ + +++ GAG G T YPP+S+ R+VD AIF++H++G
Sbjct: 201 PRLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSG 260
Query: 429 ISS 437
SS
Sbjct: 261 ASS 263
Score = 36.7 bits (81), Expect = 0.39
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +1
Query: 82 AELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 255
A LG L G D ++N ++T H N +PL++GAPD+AFPR
Sbjct: 143 ALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPR 202
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 50.4 bits (115), Expect = 3e-05
Identities = 28/63 (44%), Positives = 33/63 (52%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P + N+ F + G G VYPP SS +AH +VDL IF LHLAG
Sbjct: 85 PRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAG 144
Query: 429 ISS 437
ISS
Sbjct: 145 ISS 147
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 49.2 bits (112), Expect = 7e-05
Identities = 24/63 (38%), Positives = 34/63 (53%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P +NN+ + G G G T+YPPLS++ G +DLA+FSLH+AG
Sbjct: 97 PRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAG 156
Query: 429 ISS 437
+SS
Sbjct: 157 MSS 159
Score = 39.9 bits (89), Expect = 0.042
Identities = 22/85 (25%), Positives = 34/85 (40%)
Frame = +1
Query: 1 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 180
HKDIGT+Y EL +PG + +Y++I+T HA
Sbjct: 14 HKDIGTIYLYMGLWSGVFGLSLSHCMRIELSHPGEWLQVGYMYHSIMTMHAFMMIFFFVM 73
Query: 181 XXXXXXXXN*LVPLILGAPDIAFPR 255
N +PL++ D++ PR
Sbjct: 74 PTSIGGLGNWFIPLMIKIKDLSMPR 98
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 48.8 bits (111), Expect = 9e-05
Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXX 174
HK IGT Y EL +PG G Q+YN+++T H
Sbjct: 21 HKTIGTYYIVLGYWAGLGGSVLSMLIRFELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFL 80
Query: 175 XXXXXXXXXXN*LVPLILGAPDIAFPR 255
N ++PL+LGAP++AFPR
Sbjct: 81 VMPILIGGFGNWMLPLMLGAPEMAFPR 107
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 47.6 bits (108), Expect = 2e-04
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = +3
Query: 324 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 437
NGAGTG TVY PLS++ G +VD+AI SLH+AG SS
Sbjct: 164 NGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASS 200
Score = 40.3 bits (90), Expect = 0.032
Identities = 32/101 (31%), Positives = 39/101 (38%), Gaps = 16/101 (15%)
Frame = +1
Query: 1 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-------SLIGD------DQIY---N 132
HKDIGTLY AEL PG + D DQ Y N
Sbjct: 36 HKDIGTLYLIFAIIAGIIGGAISGLMRAELAEPGIQYLQTWARFSDGPSATLDQAYHLWN 95
Query: 133 TIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 255
++TAH N VP+++GAPD+AFPR
Sbjct: 96 VLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPR 136
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 47.6 bits (108), Expect = 2e-04
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = +3
Query: 357 PLSSNIAHRGRSVDLAIFSLHLAGISS 437
PL+S+IAH G SVD+AIFSLHLAG+SS
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSS 98
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 46.4 bits (105), Expect = 5e-04
Identities = 26/85 (30%), Positives = 37/85 (43%)
Frame = +1
Query: 1 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 180
HKDIG LY EL +PG + + YN+++T+H
Sbjct: 94 HKDIGLLYGAFGLTAFAVGGLMVVLMRIELADPGMTVISNTFYNSLLTSHGITMLFLFAT 153
Query: 181 XXXXXXXXN*LVPLILGAPDIAFPR 255
N L+PL++GA D+AFPR
Sbjct: 154 PIIAAFS-NYLIPLLIGADDMAFPR 177
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 44.4 bits (100), Expect = 0.002
Identities = 29/86 (33%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 177
KDI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 17 KDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFV 76
Query: 178 XXXXXXXXXN*LVPLILGAPDIAFPR 255
N L+PL+LGA D+AF R
Sbjct: 77 MPALVGGFGNYLMPLMLGASDMAFAR 102
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 41.5 bits (93), Expect = 0.014
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P +NN+ F + E G G G T+YP L H + D +F++HL G
Sbjct: 98 PRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLG 157
Query: 429 ISS 437
ISS
Sbjct: 158 ISS 160
Score = 38.7 bits (86), Expect = 0.098
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 100 GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 255
G L GD Q YN ++T+H N +P++ G PD+ FPR
Sbjct: 48 GILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPR 99
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 41.1 bits (92), Expect = 0.018
Identities = 25/85 (29%), Positives = 31/85 (36%)
Frame = +1
Query: 1 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 180
HK IG ++ EL PG I D YN T H
Sbjct: 42 HKRIGLMFLFWVLLFFLVGGIFALLIRVELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMI 101
Query: 181 XXXXXXXXN*LVPLILGAPDIAFPR 255
N ++PL+LGA D+AFPR
Sbjct: 102 PAIPAVFGNFMLPLMLGAKDVAFPR 126
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 40.7 bits (91), Expect = 0.024
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +3
Query: 318 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 437
+E G+GTG T+YPPLS+++++ G +D IF L AGI+S
Sbjct: 126 LEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIAS 163
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 39.9 bits (89), Expect = 0.042
Identities = 23/85 (27%), Positives = 32/85 (37%)
Frame = +1
Query: 1 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 180
HK IG ++ EL PG I D YN + T H
Sbjct: 35 HKRIGVMFLVATTISFALGGFFALLIRLELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMI 94
Query: 181 XXXXXXXXN*LVPLILGAPDIAFPR 255
N L+P+++GA D+AFP+
Sbjct: 95 PAIPSGFGNFLLPIMIGAKDVAFPK 119
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 39.5 bits (88), Expect = 0.056
Identities = 25/86 (29%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDD-QIYNTIVTAHAXXXXXXXX 177
HK +G LY EL G I DD +YNT + H
Sbjct: 14 HKRVGILYLIGSIAAFAVAGIMAMLIRLELSQIGPTITDDPSVYNTWLYFHGAAMILAFQ 73
Query: 178 XXXXXXXXXN*LVPLILGAPDIAFPR 255
N +PL++GA D+AFPR
Sbjct: 74 IPALTGFFANYFIPLMIGAKDVAFPR 99
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 39.1 bits (87), Expect = 0.074
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +3
Query: 327 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 437
G G G T+YPPLS G VD +FSLHLAG+SS
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSS 252
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 38.7 bits (86), Expect = 0.098
Identities = 29/99 (29%), Positives = 39/99 (39%), Gaps = 2/99 (2%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 177
KDI LY EL PG+ L G+ Q++N +V HA
Sbjct: 12 KDIAILYFIFAIFCGMAGTAMSVIIRLELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLV 71
Query: 178 XXXXXXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPL 294
N L+PL++GA D++F R F PP L
Sbjct: 72 MPALIGGFGNYLLPLMIGASDMSFARLNNISFWLLPPAL 110
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 38.7 bits (86), Expect = 0.098
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLA 425
P IN+I E G GTG T+YPPLS+++ +VD+ IF L ++
Sbjct: 100 PRINSISLLLQPIAFVLVILSTAAEFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVS 159
Query: 426 GISS 437
G++S
Sbjct: 160 GVAS 163
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 37.9 bits (84), Expect = 0.17
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +1
Query: 97 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 255
PG + D + YN ++T H N L+PL++GA D+AFPR
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPR 54
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 36.7 bits (81), Expect = 0.39
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +3
Query: 330 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 437
A G T YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIAS 143
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 36.7 bits (81), Expect = 0.39
Identities = 23/85 (27%), Positives = 33/85 (38%)
Frame = +1
Query: 1 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 180
HK +G +Y AEL PG ++ +N + T H
Sbjct: 38 HKQLGIMYIIMSFSFFFLGGLMALLIRAELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGT 97
Query: 181 XXXXXXXXN*LVPLILGAPDIAFPR 255
N ++PL +GAPD+AFPR
Sbjct: 98 PIVWGFA-NYVLPLQIGAPDVAFPR 121
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 36.7 bits (81), Expect = 0.39
Identities = 23/85 (27%), Positives = 31/85 (36%)
Frame = +1
Query: 1 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 180
HK IG +Y +L P + + YN I+T H
Sbjct: 24 HKKIGLMYTATAFFAFALAGVFSLLIRTQLAVPNNQFLTGEQYNQILTLHGATMLFFFII 83
Query: 181 XXXXXXXXN*LVPLILGAPDIAFPR 255
N +VPL+LGA D+A PR
Sbjct: 84 QAGLTGFGNFVVPLMLGARDVALPR 108
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 35.5 bits (78), Expect = 0.91
Identities = 22/85 (25%), Positives = 31/85 (36%)
Frame = +1
Query: 1 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 180
HKDIG LY EL + +YN ++T+H
Sbjct: 68 HKDIGILYGVYGTIAFAWGGVSVLLMRTELATSSETLISPSLYNGLLTSHGITMLFLFGT 127
Query: 181 XXXXXXXXN*LVPLILGAPDIAFPR 255
N +PL++ A D+AFPR
Sbjct: 128 PMIAAFG-NYFIPLLIDADDMAFPR 151
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 35.1 bits (77), Expect = 1.2
Identities = 23/85 (27%), Positives = 32/85 (37%)
Frame = +1
Query: 1 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 180
HK IG +Y +LG P + +YN + T H
Sbjct: 31 HKRIGIMYLVSAFVFFLIGGIEALLMRIQLGVPDNTFLTPDVYNQMFTMHGTTMIFLGLM 90
Query: 181 XXXXXXXXN*LVPLILGAPDIAFPR 255
N +VPL++GA D+AFPR
Sbjct: 91 PLNVGLG-NYMVPLMIGARDMAFPR 114
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 35.1 bits (77), Expect = 1.2
Identities = 26/85 (30%), Positives = 32/85 (37%)
Frame = +1
Query: 1 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 180
HKDIG LY EL + G+ + YN V+ H
Sbjct: 22 HKDIGVLYLITALFFLVFGGVLALLFRLELISSGADLLGSMGYNQAVSTHGLLMVFWFIS 81
Query: 181 XXXXXXXXN*LVPLILGAPDIAFPR 255
N LVPL +GA D+AFPR
Sbjct: 82 PFAFGFA-NYLVPLQIGADDLAFPR 105
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 34.7 bits (76), Expect = 1.6
Identities = 21/55 (38%), Positives = 26/55 (47%)
Frame = +2
Query: 254 DK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTT 418
+K +KIL TPL Y N C K C + +NSLP Y T R +F T
Sbjct: 81 NKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPT 135
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 34.3 bits (75), Expect = 2.1
Identities = 22/85 (25%), Positives = 32/85 (37%)
Frame = +1
Query: 1 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 180
HK IG +Y +L PG + + +N + T HA
Sbjct: 29 HKRIGIMYGVTGFFFFLVGGLEAWIMRLQLARPGLEVVTARTFNALFTMHATTMIFLGVM 88
Query: 181 XXXXXXXXN*LVPLILGAPDIAFPR 255
N +PL++GA D+AFPR
Sbjct: 89 PLLSAFM-NYFLPLMIGARDVAFPR 112
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 33.5 bits (73), Expect = 3.7
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +3
Query: 336 TG*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISS 437
+G T+YPPLS+ A G ++DL++ +H+ GISS
Sbjct: 135 SGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISS 169
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 33.5 bits (73), Expect = 3.7
Identities = 23/84 (27%), Positives = 30/84 (35%)
Frame = +1
Query: 1 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 180
HK +G +Y A+L P + D YN I T H
Sbjct: 53 HKKLGIMYIISAVIMLFRGGVDGLMMRAQLALPNNSFLDSNHYNEIFTTHGTIMIIFMAM 112
Query: 181 XXXXXXXXN*LVPLILGAPDIAFP 252
N +VPL +GA D+AFP
Sbjct: 113 PFLIGLI-NVVVPLQIGARDVAFP 135
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 33.1 bits (72), Expect = 4.9
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +1
Query: 85 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 255
EL P + + D +YN + T H N L+P ++GAPD+AFP+
Sbjct: 64 ELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMIGAPDMAFPK 119
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 32.7 bits (71), Expect = 6.4
Identities = 22/85 (25%), Positives = 28/85 (32%)
Frame = +1
Query: 1 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 180
HK IG LY +L P + YN ++T HA
Sbjct: 32 HKKIGLLYIIVSILGFCLGGLLALAIRVQLALPEQTLLVGTTYNQVLTMHAAIMLFFFLI 91
Query: 181 XXXXXXXXN*LVPLILGAPDIAFPR 255
N +PL LG D+A PR
Sbjct: 92 PLGLFGFGNYFLPLQLGVRDVALPR 116
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 32.7 bits (71), Expect = 6.4
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 330 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 437
AG G T Y PLS+N+ G L + ++ + G+SS
Sbjct: 155 AGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSS 190
>UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;
n=21; Neocoleoidea|Rep: NADH-ubiquinone oxidoreductase
chain 2 - Sepia officinalis (Common cuttlefish)
Length = 375
Score = 32.7 bits (71), Expect = 6.4
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3
Query: 9 YWNIIFYFWYLIRNNWNIFKTFNS 80
YWNI+F+FWYLI ++ K NS
Sbjct: 348 YWNIMFHFWYLISFISHLAKINNS 371
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 32.7 bits (71), Expect = 6.4
Identities = 22/85 (25%), Positives = 30/85 (35%)
Frame = +1
Query: 1 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 180
HK IG Y EL P ++YN ++T H
Sbjct: 27 HKVIGIQYLVTSFLFFFIGGSFAEAMRTELATPSPDFVQPEMYNQLMTLHGTIMIFLWIV 86
Query: 181 XXXXXXXXN*LVPLILGAPDIAFPR 255
N L+PL++G D+AFPR
Sbjct: 87 PAGAAFA-NYLIPLMVGTEDMAFPR 110
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 32.7 bits (71), Expect = 6.4
Identities = 25/85 (29%), Positives = 29/85 (34%)
Frame = +1
Query: 1 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 180
HKDIG LY +L P S Y VT H
Sbjct: 21 HKDIGLLYLVTSIAFLLIAGSLALLFRVQLAIPKSNFLTGDAYYEAVTVHGLIMLLWFAS 80
Query: 181 XXXXXXXXN*LVPLILGAPDIAFPR 255
N +VPL +GA D+AFPR
Sbjct: 81 PFAFGLA-NYIVPLQIGARDLAFPR 104
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 32.3 bits (70), Expect = 8.5
Identities = 21/85 (24%), Positives = 31/85 (36%)
Frame = +1
Query: 1 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 180
HK IG +Y +L P + +++N + T H
Sbjct: 32 HKRIGIMYILTAVFYLAVGGFEALLMRIQLAFPNNTFLSPEMFNQLFTMHGTTMVFLVGM 91
Query: 181 XXXXXXXXN*LVPLILGAPDIAFPR 255
N VPL++GA D+AFPR
Sbjct: 92 PVLTGFA-NYFVPLMIGARDVAFPR 115
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 32.3 bits (70), Expect = 8.5
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +1
Query: 121 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 252
+ Y +VT HA N L+PL++GA D+AFP
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFP 129
>UniRef50_Q8ID15 Cluster: Putative uncharacterized protein
MAL13P1.352; n=2; Plasmodium|Rep: Putative
uncharacterized protein MAL13P1.352 - Plasmodium
falciparum (isolate 3D7)
Length = 1106
Score = 32.3 bits (70), Expect = 8.5
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 281 TPLPYIINFKKNCRKWCRN 337
T L Y + KK+CRKWCRN
Sbjct: 697 TKLMYCVIKKKHCRKWCRN 715
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 416,736,765
Number of Sequences: 1657284
Number of extensions: 6486620
Number of successful extensions: 12213
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 11805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12167
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39987623712
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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