Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10648X
(452 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19071| Best HMM Match : Ribosomal_L4 (HMM E-Value=0) 124 3e-29
SB_53717| Best HMM Match : Furin-like (HMM E-Value=0.05) 33 0.084
SB_3575| Best HMM Match : DUF943 (HMM E-Value=4.5) 33 0.084
SB_35460| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.26
SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45) 31 0.34
SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08) 30 1.0
SB_29069| Best HMM Match : Furin-like (HMM E-Value=0.042) 30 1.0
SB_49912| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.4
SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2) 29 1.8
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 29 1.8
SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95) 29 1.8
SB_20534| Best HMM Match : DUF21 (HMM E-Value=9.8) 28 3.1
SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.1
SB_8252| Best HMM Match : rve (HMM E-Value=0.13) 28 3.1
SB_9657| Best HMM Match : P_proprotein (HMM E-Value=7.5e-29) 28 4.2
SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_59069| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.5
SB_25030| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.5
SB_9084| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.5
SB_46293| Best HMM Match : Keratin_B2 (HMM E-Value=0.00077) 27 9.6
SB_45599| Best HMM Match : GRP (HMM E-Value=0.22) 27 9.6
SB_15139| Best HMM Match : Collagen (HMM E-Value=0.27) 27 9.6
SB_257| Best HMM Match : Tetraspannin (HMM E-Value=1.5) 27 9.6
>SB_19071| Best HMM Match : Ribosomal_L4 (HMM E-Value=0)
Length = 299
Score = 124 bits (299), Expect = 3e-29
Identities = 54/66 (81%), Positives = 60/66 (90%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPXXRWHRRVNLRQR 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +WH +VN++QR
Sbjct: 58 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRKWHTKVNVQQR 117
Query: 435 RAALAA 452
R A+ +
Sbjct: 118 RFAVCS 123
Score = 70.9 bits (166), Expect = 5e-13
Identities = 33/59 (55%), Positives = 44/59 (74%)
Frame = +1
Query: 82 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHK 258
ARP+++V++E E+ LP VFKAPIRPDLVN VH +++KN RQPY V+K AGH+
Sbjct: 2 ARPVITVFNENGESA--GQTTLPAVFKAPIRPDLVNFVHSNIAKNKRQPYAVNKLAGHQ 58
>SB_53717| Best HMM Match : Furin-like (HMM E-Value=0.05)
Length = 1098
Score = 33.5 bits (73), Expect = 0.084
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = +3
Query: 243 GGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 371
GGW Q WG G+ + R GGG R G +G M GG
Sbjct: 258 GGWGQGPGGGWGRGQG-RGMGRGPGGGWGRGSGGGWGRMQGGG 299
>SB_3575| Best HMM Match : DUF943 (HMM E-Value=4.5)
Length = 612
Score = 33.5 bits (73), Expect = 0.084
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -3
Query: 369 HHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWF 256
HH CY H Y Y+ H H + R H YP +H++
Sbjct: 20 HHYCCYCHH---RYCYYRHHHYCWYRHHYHYPCYRHYY 54
Score = 27.5 bits (58), Expect = 5.5
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -3
Query: 375 YVHHDTCYRRHPDRTYEYHHHGH 307
Y HH CY RH + Y HH H
Sbjct: 25 YCHHRYCYYRHHHYCW-YRHHYH 46
>SB_35460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 511
Score = 31.9 bits (69), Expect = 0.26
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -3
Query: 354 YRRHPDRTYEYHHHGHAEFGRQHVQYPMIQH 262
Y +HP T+ YH H R H Q+P + H
Sbjct: 232 YHQHPQVTHRYHQHPQVTH-RYHQQHPQVTH 261
Score = 31.5 bits (68), Expect = 0.34
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 354 YRRHPDRTYEYHHHGHAEFGRQHVQYPMIQH 262
Y +HP T+ YHH H + ++ Q+P + H
Sbjct: 413 YHQHPQLTHRYHHQ-HPQVIHRYHQHPQVTH 442
Score = 27.5 bits (58), Expect = 5.5
Identities = 10/31 (32%), Positives = 14/31 (45%)
Frame = -3
Query: 354 YRRHPDRTYEYHHHGHAEFGRQHVQYPMIQH 262
Y +HP T+ YH R Q+P + H
Sbjct: 242 YHQHPQVTHRYHQQHPQVTHRYQYQHPQVTH 272
Score = 27.1 bits (57), Expect = 7.3
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -3
Query: 345 HPDRTYEYHHHGHAEFGRQHVQYPMIQH 262
HP T+ YH H R H Q+P + H
Sbjct: 406 HPQVTHRYHQHPQLTH-RYHHQHPQVIH 432
>SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45)
Length = 453
Score = 31.5 bits (68), Expect = 0.34
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 369 HHDTCYRRHPDRTYEYHHHGHAEFGRQH 286
HH RH R + +HHH H E+ R+H
Sbjct: 325 HHQRHRHRHRHR-HRHHHHHHHEYNRRH 351
>SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08)
Length = 839
Score = 29.9 bits (64), Expect = 1.0
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -3
Query: 369 HHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFVTSLL 241
HH + RH R + YHHH + H +P FVT+++
Sbjct: 570 HHHLHHHRHHHRHHHYHHHHYP----HHHHHPCTIIIFVTTII 608
>SB_29069| Best HMM Match : Furin-like (HMM E-Value=0.042)
Length = 628
Score = 29.9 bits (64), Expect = 1.0
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +3
Query: 243 GGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 371
GGW + S WG G R +GGG R G +G GG
Sbjct: 6 GGWGRGSGGGWGQGPG-GGWGRGQGGGMGRGPGGGWGRGSGGG 47
Score = 29.1 bits (62), Expect = 1.8
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +3
Query: 243 GGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 371
GGW + S WG R++GGG R G +G M GG
Sbjct: 38 GGWGRGSGGGWG---------RMQGGGMGRGPGGGWGRMQGGG 71
>SB_49912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3
Query: 378 TYVHHDTCYRRHPDRTYEYHHHGHA 304
TY H DT R+HPD H HA
Sbjct: 123 TYTHQDTQMRKHPDTQIYVHAPRHA 147
>SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2)
Length = 694
Score = 29.1 bits (62), Expect = 1.8
Identities = 9/35 (25%), Positives = 14/35 (40%)
Frame = -3
Query: 381 RTYVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQY 277
R + HH + H + +HHH H H +
Sbjct: 209 RHHQHHQHHHHHHHQHNHHHHHHNHHHHHHHHYHH 243
Score = 26.6 bits (56), Expect = 9.6
Identities = 8/21 (38%), Positives = 10/21 (47%)
Frame = -3
Query: 369 HHDTCYRRHPDRTYEYHHHGH 307
HH + H + YHHH H
Sbjct: 229 HHHNHHHHHHHHYHHYHHHHH 249
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 29.1 bits (62), Expect = 1.8
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Frame = +3
Query: 210 QELEAALLREQGGWSQTSAESWGTGRA----VARIPR-VRGGGTHRS 335
+ E+AL E+ W+Q AES T RA +AR+ R GT RS
Sbjct: 3432 EHAESALAAERAQWAQEKAESQNTIRAANEEIARLKEDARKAGTERS 3478
>SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95)
Length = 1080
Score = 29.1 bits (62), Expect = 1.8
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 258 TSAESWGTGRAVARIPR-VRGGGTHRSGQGAFGNMCRGGR 374
T +E +G ++ R PR RGGG G G G RGGR
Sbjct: 983 TPSEPSSSGSSIVRRPRRRRGGGGGGGGGGGGGGGRRGGR 1022
>SB_20534| Best HMM Match : DUF21 (HMM E-Value=9.8)
Length = 193
Score = 28.3 bits (60), Expect = 3.1
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 369 HHDTCYRRHPDRTYEYHHH 313
HH YR H + Y +HHH
Sbjct: 96 HHHQHYRHHRHQHYRHHHH 114
>SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3486
Score = 28.3 bits (60), Expect = 3.1
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1
Query: 149 GRGLAAPCTVSLFSEYTDTKGRATDRLI 66
G+GL C+V+L S Y T+G+ RL+
Sbjct: 3163 GKGLTTWCSVNLDSVYLSTEGKEVYRLV 3190
>SB_8252| Best HMM Match : rve (HMM E-Value=0.13)
Length = 264
Score = 28.3 bits (60), Expect = 3.1
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -3
Query: 375 YVHHDTCYRRHPDRTYEYHHHGH 307
Y HH +RR R + +HHH H
Sbjct: 233 YHHHHHHHRRRRRRRHHHHHHHH 255
>SB_9657| Best HMM Match : P_proprotein (HMM E-Value=7.5e-29)
Length = 1779
Score = 27.9 bits (59), Expect = 4.2
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 369 HHDTCYRRHPDRTYEYHHHGH 307
HH + RH DR + + HH H
Sbjct: 340 HHRNKHYRHHDRNHHHRHHHH 360
>SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 736
Score = 27.9 bits (59), Expect = 4.2
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = -3
Query: 357 CYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQH 262
CY + + + YHHH H H Q+ H
Sbjct: 246 CYHKLKNPRHRYHHHHHHHHQHNHHQHHHHHH 277
Score = 27.9 bits (59), Expect = 4.2
Identities = 10/47 (21%), Positives = 22/47 (46%)
Frame = -3
Query: 381 RTYVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFVTSLL 241
R + HH ++ + + + +HHH H H Q+ H + +++
Sbjct: 256 RYHHHHHHHHQHNHHQHHHHHHHHHHNHHHHHQQHHHHHHHHIINII 302
>SB_59069| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 664
Score = 27.5 bits (58), Expect = 5.5
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3
Query: 378 TYVHHDTCYRRHPDRTYEYHHHGHA 304
TY H DT +HPD H HA
Sbjct: 323 TYTHQDTQMHKHPDTQMYVHAPRHA 347
>SB_25030| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 113
Score = 27.5 bits (58), Expect = 5.5
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = -3
Query: 333 TYEYHHHGHAEFGRQHVQYPMI-QHWFVTSLLAHAVGLP-RVLGHRNVN 193
+Y++HHHG E Q V I + W L +H P RV+G ++
Sbjct: 21 SYQWHHHGTGETDDQPVTTTRITRTWVNRRLNSHRTIKPSRVIGRAQIH 69
>SB_9084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 27.5 bits (58), Expect = 5.5
Identities = 10/40 (25%), Positives = 16/40 (40%)
Frame = -3
Query: 369 HHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFVT 250
HH + H +++ HH H QH + H +T
Sbjct: 6 HHHHDHHHHDHHHHDHQHHDHQHHDHQHHDHHHHDHHHMT 45
>SB_46293| Best HMM Match : Keratin_B2 (HMM E-Value=0.00077)
Length = 677
Score = 26.6 bits (56), Expect = 9.6
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = -2
Query: 193 HH*PGPDGWAP*TRTGGAWLHPAPSHSSLSTPT 95
HH W T+T W HP + ++L PT
Sbjct: 117 HHTKTQANWYHPTKTQANWYHPTKTQANLYHPT 149
>SB_45599| Best HMM Match : GRP (HMM E-Value=0.22)
Length = 595
Score = 26.6 bits (56), Expect = 9.6
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 279 TGRAVARIPR-VRGGGTHRSGQGAFGNMCRGGR 374
+G ++ R PR RGGG G G G RGGR
Sbjct: 501 SGSSIVRRPRRRRGGGGGGGGGGGGGGGGRGGR 533
>SB_15139| Best HMM Match : Collagen (HMM E-Value=0.27)
Length = 562
Score = 26.6 bits (56), Expect = 9.6
Identities = 18/48 (37%), Positives = 20/48 (41%)
Frame = +3
Query: 234 REQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM 377
R GW S G VA RV GG SG G + RGGR+
Sbjct: 228 RVASGWRVASGGRVARGGCVASGGRVASGGRVASG----GRVARGGRV 271
>SB_257| Best HMM Match : Tetraspannin (HMM E-Value=1.5)
Length = 237
Score = 26.6 bits (56), Expect = 9.6
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = -3
Query: 354 YRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHW 259
+R+H +R +HHH H +P H+
Sbjct: 190 HRQHYNRHRRHHHHHRHRHHHHHPNHPYSHHY 221
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,410,624
Number of Sequences: 59808
Number of extensions: 274329
Number of successful extensions: 905
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 908427626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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