Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10648X
         (452 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    23   2.1  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   2.1  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   3.6  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   3.6  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   3.6  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   8.3  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   8.3  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   8.3  

>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +1

Query: 196 HVSMSKNSRQPYCVSKEAGHKPVL 267
           H+    ++ +P C+ +  GH P+L
Sbjct: 324 HIKSPYHTPEPDCIHELLGHMPLL 347


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -3

Query: 324 YHHHGHAEFGRQHVQY 277
           +HHH H     QH+ Y
Sbjct: 351 HHHHHHQTQSLQHLHY 366


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 336 GQGAFGNMCRGGRMFAP 386
           G G FG++CRG     P
Sbjct: 640 GGGEFGDVCRGKLKLPP 656


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 9/23 (39%), Positives = 10/23 (43%), Gaps = 1/23 (4%)
 Frame = -3

Query: 369 HHDTCYRRHPD-RTYEYHHHGHA 304
           HH T    H       +HHH HA
Sbjct: 415 HHHTMGHGHSHIHATPHHHHSHA 437


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -3

Query: 306 AEFGRQHVQYPMIQHWFVTSLLAHAVGLPRVL 211
           +E+G  +VQY  +Q  F T  +A  +    VL
Sbjct: 287 SEYGANNVQYQGVQDIFNTESIAKIMSKNGVL 318


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = +1

Query: 160 KAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHK 258
           K P++   + D+ + M    RQP+ +   A  K
Sbjct: 59  KLPVKAITLPDLSIPMQLGRRQPFSLFIPAHRK 91


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -3

Query: 306 AEFGRQHVQYPMIQHWFVTSLLAHAVGLPRVL 211
           ++FG  +VQY   +    T  LA AV    VL
Sbjct: 284 SQFGENNVQYQGSEDILNTQSLAKAVSKNGVL 315


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -3

Query: 384 GRTYVHHDTCYRRHPDRTYE 325
           G T +HH   Y R   + YE
Sbjct: 151 GGTTLHHGMAYHRGHRKDYE 170


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,803
Number of Sequences: 438
Number of extensions: 2207
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11943513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)