Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10642X
(345 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62847 Cluster: 40S ribosomal protein S24; n=212; Eukar... 112 2e-24
UniRef50_Q8LC83 Cluster: 40S ribosomal protein S24-2; n=6; Eukar... 90 1e-17
UniRef50_Q8MUB8 Cluster: 40S ribosomal protein S24; n=1; Clonorc... 87 6e-17
UniRef50_A3BCP7 Cluster: Putative uncharacterized protein; n=2; ... 82 3e-15
UniRef50_Q8I3R6 Cluster: 40S ribosomal subunit protein S24, puta... 69 2e-11
UniRef50_UPI000150A155 Cluster: Ribosomal protein S24e containin... 68 4e-11
UniRef50_Q5CPN5 Cluster: 40s ribosomal protein s24; n=6; Eukaryo... 68 4e-11
UniRef50_UPI0000498B4B Cluster: 40S ribosomal protein S24; n=3; ... 60 1e-08
UniRef50_Q91834 Cluster: Fragment of Xenopus laevis ribosomal pr... 57 7e-08
UniRef50_Q4Q1D2 Cluster: 40S ribosomal protein S24e; n=4; Leishm... 54 7e-07
UniRef50_A2F0H5 Cluster: 40S ribosomal protein S24; n=3; Trichom... 53 2e-06
UniRef50_Q9AW51 Cluster: 40S ribosomal protein S24; n=1; Guillar... 50 8e-06
UniRef50_Q00V00 Cluster: 40S ribosomal protein S24; n=1; Ostreoc... 50 8e-06
UniRef50_Q8SR06 Cluster: 40S RIBOSOMAL PROTEIN S24; n=1; Encepha... 49 2e-05
UniRef50_A0BWM9 Cluster: Chromosome undetermined scaffold_132, w... 48 6e-05
UniRef50_Q9UY20 Cluster: 30S ribosomal protein S24e; n=4; Thermo... 43 0.002
UniRef50_P34582 Cluster: Uncharacterized protein T26G10.3; n=1; ... 42 0.002
UniRef50_A3H8R4 Cluster: 30S ribosomal protein S24e; n=1; Caldiv... 39 0.020
UniRef50_Q8ZV65 Cluster: 30S ribosomal protein S24e; n=4; Pyroba... 37 0.080
UniRef50_A4YIV8 Cluster: Ribosomal protein S24E-like protein; n=... 34 0.56
UniRef50_A6TKB5 Cluster: Putative uncharacterized protein; n=1; ... 34 0.75
UniRef50_A1ZRP2 Cluster: Von Willebrand factor type A domain pro... 34 0.75
UniRef50_Q1XFY8 Cluster: Putative uncharacterized protein; n=1; ... 33 0.98
UniRef50_A1RXC7 Cluster: 30S ribosomal protein S24e; n=1; Thermo... 33 0.98
UniRef50_Q7QAG9 Cluster: ENSANGP00000021262; n=1; Anopheles gamb... 33 1.7
UniRef50_Q22D17 Cluster: Protein kinase domain containing protei... 32 3.0
UniRef50_Q9RTG6 Cluster: Putative uncharacterized protein; n=1; ... 31 4.0
UniRef50_Q975Q9 Cluster: 30S ribosomal protein S24e; n=3; Sulfol... 31 5.3
UniRef50_Q74M50 Cluster: 30S ribosomal protein S24e; n=1; Nanoar... 31 5.3
UniRef50_Q893C3 Cluster: Dipeptide transport ATP-binding protein... 31 6.9
UniRef50_A4FJP7 Cluster: Putative uncharacterized protein; n=1; ... 31 6.9
UniRef50_Q6IKD3 Cluster: HDC12791; n=1; Drosophila melanogaster|... 31 6.9
UniRef50_Q29FD3 Cluster: GA12452-PA; n=1; Drosophila pseudoobscu... 31 6.9
UniRef50_Q8TVD8 Cluster: 30S ribosomal protein S24e; n=1; Methan... 31 6.9
UniRef50_Q4D9V8 Cluster: Putative uncharacterized protein; n=2; ... 30 9.2
UniRef50_Q4JB69 Cluster: Conserved Crenarchaeal membrane protein... 30 9.2
UniRef50_Q8WTC1 Cluster: 28S ribosomal protein S15, mitochondria... 30 9.2
UniRef50_Q9YCY0 Cluster: 30S ribosomal protein S24e; n=2; Desulf... 30 9.2
>UniRef50_P62847 Cluster: 40S ribosomal protein S24; n=212;
Eukaryota|Rep: 40S ribosomal protein S24 - Homo sapiens
(Human)
Length = 133
Score = 112 bits (269), Expect = 2e-24
Identities = 52/61 (85%), Positives = 55/61 (90%)
Frame = +3
Query: 57 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 236
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 237 F 239
F
Sbjct: 64 F 64
Score = 56.8 bits (131), Expect = 9e-08
Identities = 24/30 (80%), Positives = 27/30 (90%)
Frame = +2
Query: 254 TGFALIYDTLDLAKKFEPKHRLARHGLYEE 343
TGF +IYD+LD AKK EPKHRLARHGLYE+
Sbjct: 70 TGFGMIYDSLDYAKKNEPKHRLARHGLYEK 99
>UniRef50_Q8LC83 Cluster: 40S ribosomal protein S24-2; n=6;
Eukaryota|Rep: 40S ribosomal protein S24-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 133
Score = 89.8 bits (213), Expect = 1e-17
Identities = 42/66 (63%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Frame = +3
Query: 45 MSEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVVFVF 221
M+E TIRTR FMTNRLLARKQ V DVLHPG+ VSK E++EKLA+MY+V P+ +F F
Sbjct: 1 MAEKAVTIRTRNFMTNRLLARKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFCF 60
Query: 222 GFKTNF 239
F+T+F
Sbjct: 61 KFRTHF 66
Score = 44.4 bits (100), Expect = 5e-04
Identities = 19/38 (50%), Positives = 28/38 (73%)
Frame = +2
Query: 221 RFQDKLRRWQXTGFALIYDTLDLAKKFEPKHRLARHGL 334
+F+ + +G+ LIYDT++ AKKFEPK+RL R+GL
Sbjct: 61 KFRTHFGGGKSSGYGLIYDTVENAKKFEPKYRLIRNGL 98
>UniRef50_Q8MUB8 Cluster: 40S ribosomal protein S24; n=1; Clonorchis
sinensis|Rep: 40S ribosomal protein S24 - Clonorchis
sinensis
Length = 139
Score = 87.4 bits (207), Expect = 6e-17
Identities = 38/58 (65%), Positives = 49/58 (84%)
Frame = +3
Query: 66 IRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNF 239
IRTRKFM+NRLL R+QMV D+LHPG+ +S +IRE+LAK YK +PD+VF FGF+T+F
Sbjct: 7 IRTRKFMSNRLLFRRQMVVDILHPGRCVLSLKDIRERLAKTYKTSPDMVFAFGFRTHF 64
Score = 43.6 bits (98), Expect = 0.001
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = +2
Query: 254 TGFALIYDTLDLAKKFEPKHRLAR 325
TGFAL+YD+LD AKKFEP++RL R
Sbjct: 70 TGFALVYDSLDHAKKFEPRYRLIR 93
>UniRef50_A3BCP7 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 166
Score = 81.8 bits (193), Expect = 3e-15
Identities = 37/60 (61%), Positives = 50/60 (83%), Gaps = 1/60 (1%)
Frame = +3
Query: 63 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVVFVFGFKTNF 239
T+RTRKFMTNRLL+RKQ V +VLHPG+ VSK +++EKLAK+Y+V + +FVF F+T+F
Sbjct: 11 TLRTRKFMTNRLLSRKQFVLEVLHPGRANVSKADLKEKLAKLYEVKDSNCIFVFKFRTHF 70
Score = 46.0 bits (104), Expect = 2e-04
Identities = 21/42 (50%), Positives = 26/42 (61%)
Frame = +2
Query: 200 SRCSVRIRFQDKLRRWQXTGFALIYDTLDLAKKFEPKHRLAR 325
S C +F+ + TGF LIYD LD AKK+EPK+RL R
Sbjct: 58 SNCIFVFKFRTHFGGGKSTGFGLIYDNLDAAKKYEPKYRLIR 99
>UniRef50_Q8I3R6 Cluster: 40S ribosomal subunit protein S24,
putative; n=1; Plasmodium falciparum 3D7|Rep: 40S
ribosomal subunit protein S24, putative - Plasmodium
falciparum (isolate 3D7)
Length = 133
Score = 69.3 bits (162), Expect = 2e-11
Identities = 31/60 (51%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Frame = +3
Query: 63 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVVFVFGFKTNF 239
TIR +K+M+N LL RKQ ++LHP K +V+K E++E+LAKMYK+ + + +FGFKT F
Sbjct: 6 TIRVKKYMSNPLLRRKQFALEILHPNKGSVAKKEVKERLAKMYKLNNVNTIVLFGFKTLF 65
Score = 38.3 bits (85), Expect = 0.035
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +2
Query: 257 GFALIYDTLDLAKKFEPKHRLARHGLYEE 343
GF LIY +D KKFE K+RL R GL ++
Sbjct: 72 GFGLIYKNVDAVKKFEKKYRLVREGLIDK 100
>UniRef50_UPI000150A155 Cluster: Ribosomal protein S24e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S24e containing protein - Tetrahymena
thermophila SB210
Length = 149
Score = 68.1 bits (159), Expect = 4e-11
Identities = 32/61 (52%), Positives = 41/61 (67%)
Frame = +3
Query: 57 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 236
T IRT+K + N LL+R+Q+ DVLHP PT SK +IRE+LAK KV V V+GF T
Sbjct: 2 TIVIRTKKILVNPLLSRRQLSLDVLHPDSPTASKEKIREELAKQLKVDARNVVVYGFSTQ 61
Query: 237 F 239
+
Sbjct: 62 Y 62
Score = 31.1 bits (67), Expect = 5.3
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 254 TGFALIYDTLDLAKKFEPKHRLAR 325
TGFAL+YD K+EP +RL +
Sbjct: 68 TGFALVYDNQQYLLKYEPNYRLRK 91
>UniRef50_Q5CPN5 Cluster: 40s ribosomal protein s24; n=6;
Eukaryota|Rep: 40s ribosomal protein s24 -
Cryptosporidium parvum Iowa II
Length = 159
Score = 68.1 bits (159), Expect = 4e-11
Identities = 32/60 (53%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Frame = +3
Query: 63 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVVFVFGFKTNF 239
T+R R+F+ N LLARKQ V DV+HP VSK++++ KLAK+YKV + + +FGFKT F
Sbjct: 33 TVRVRQFLNNPLLARKQFVVDVIHPSLGGVSKSDLKAKLAKLYKVQDANCIVLFGFKTAF 92
Score = 33.9 bits (74), Expect = 0.75
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 200 SRCSVRIRFQDKLRRWQXTGFALIYDTLDLAKKFEPKHRLARHGLYEE 343
+ C V F+ + +GF +IY+ + KKFE ++R R G+ E+
Sbjct: 80 ANCIVLFGFKTAFGGGRSSGFCVIYNNISALKKFEHRYRQVRMGIAEK 127
>UniRef50_UPI0000498B4B Cluster: 40S ribosomal protein S24; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S24 - Entamoeba histolytica HM-1:IMSS
Length = 140
Score = 60.1 bits (139), Expect = 1e-08
Identities = 31/60 (51%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Frame = +3
Query: 63 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTP-DVVFVFGFKTNF 239
TIRTR + N LL RKQ+V D+ HPG TEI+EKLAKMYKV + + GF T +
Sbjct: 9 TIRTRNLIVNPLLCRKQVVVDIYHPGIVQPKFTEIKEKLAKMYKVKDVQTIVLNGFVTKY 68
Score = 43.2 bits (97), Expect = 0.001
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +2
Query: 224 FQDKLRRWQXTGFALIYDTLDLAKKFEPKHRLARHGL 334
F K + +GFALIYDTL KKF PKH+L R GL
Sbjct: 64 FVTKYGGGKTSGFALIYDTLSALKKFVPKHQLIRAGL 100
>UniRef50_Q91834 Cluster: Fragment of Xenopus laevis ribosomal
protein S19; n=1; Xenopus laevis|Rep: Fragment of
Xenopus laevis ribosomal protein S19 - Xenopus laevis
(African clawed frog)
Length = 142
Score = 57.2 bits (132), Expect = 7e-08
Identities = 28/64 (43%), Positives = 43/64 (67%)
Frame = -2
Query: 248 ATSEVCLETEYEHYIGSNLVHFGELLTDLGLADGWFSWM*NIANHLLARQQSVGHELASA 69
ATS+V +T++++ I LVH +L +D L D F+WM I +HLLA Q+SV H+L+ +
Sbjct: 69 ATSKVSPKTKHKNNIWGCLVHLCQLFSDFSLGDSSFAWMKYINDHLLALQKSVCHKLSCS 128
Query: 68 NSRC 57
+S C
Sbjct: 129 DSHC 132
>UniRef50_Q4Q1D2 Cluster: 40S ribosomal protein S24e; n=4;
Leishmania|Rep: 40S ribosomal protein S24e - Leishmania
major
Length = 137
Score = 54.0 bits (124), Expect = 7e-07
Identities = 33/70 (47%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Frame = +3
Query: 39 FKMSEGTATIRTRKFMTNRLLARKQMVCDVLHP-GKPTVSKTEIREKLAKMYKVTPDV-- 209
F+ + IRT +F N+LL RKQ + +V HP TV IR+KLA +YKV PD
Sbjct: 3 FQKKKAEVCIRTSQFKVNKLLNRKQFIVEVNHPHWCGTVPTQLIRKKLATLYKV-PDASQ 61
Query: 210 VFVFGFKTNF 239
V +FGFKT F
Sbjct: 62 VSLFGFKTKF 71
Score = 36.3 bits (80), Expect = 0.14
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = +2
Query: 224 FQDKLRRWQXTGFALIYDTLDLAKKFEPKHRLARHG 331
F+ K + TGF LIYD L K+FEP +R R G
Sbjct: 67 FKTKFGGGKTTGFGLIYDDLASLKRFEPNYRKTRMG 102
>UniRef50_A2F0H5 Cluster: 40S ribosomal protein S24; n=3;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein S24
- Trichomonas vaginalis G3
Length = 140
Score = 52.8 bits (121), Expect = 2e-06
Identities = 22/59 (37%), Positives = 37/59 (62%)
Frame = +3
Query: 63 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNF 239
++ RK++ N+LL RKQ V D+ H G ++ EI++++A K D+V +FG +T F
Sbjct: 5 SVHIRKYIVNKLLDRKQFVIDMQHLGAKAPTRDEIKDEVASRLKANKDLVVIFGLETKF 63
Score = 43.2 bits (97), Expect = 0.001
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +2
Query: 254 TGFALIYDTLDLAKKFEPKHRLARHGLYEE 343
TGF +YD+LD KK EPKHRL + GL E+
Sbjct: 69 TGFGFVYDSLDALKKTEPKHRLIKAGLAEK 98
>UniRef50_Q9AW51 Cluster: 40S ribosomal protein S24; n=1; Guillardia
theta|Rep: 40S ribosomal protein S24 - Guillardia theta
(Cryptomonas phi)
Length = 129
Score = 50.4 bits (115), Expect = 8e-06
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = +3
Query: 66 IRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVVFVFGFKTNF 239
++T+KF N LL RKQ + + K +SK +R +L+K Y++ P ++F+FG K NF
Sbjct: 10 LKTKKFKNNPLLKRKQFLLSIDRKKKFNISKEWLRIELSKYYRIKDPSLIFIFGLKNNF 68
>UniRef50_Q00V00 Cluster: 40S ribosomal protein S24; n=1;
Ostreococcus tauri|Rep: 40S ribosomal protein S24 -
Ostreococcus tauri
Length = 134
Score = 50.4 bits (115), Expect = 8e-06
Identities = 33/72 (45%), Positives = 42/72 (58%), Gaps = 20/72 (27%)
Frame = +3
Query: 84 MTNRLLARKQMV-----------CDVLHPGKPTVSK--------TEIREKLAKMYKVTPD 206
MTNRLL R+Q V CDVLHPG+ VSK E++EK+AKMY V+ +
Sbjct: 1 MTNRLLQRRQFVRLTNVFHQSQICDVLHPGRANVSKVRYIRGAGAELQEKIAKMYNVSDE 60
Query: 207 -VVFVFGFKTNF 239
V +FGF+T F
Sbjct: 61 KCVSIFGFRTAF 72
Score = 46.8 bits (106), Expect = 1e-04
Identities = 22/44 (50%), Positives = 26/44 (59%)
Frame = +2
Query: 203 RCSVRIRFQDKLRRWQXTGFALIYDTLDLAKKFEPKHRLARHGL 334
+C F+ + TGF LIYD +D KKFEPKHRL R GL
Sbjct: 61 KCVSIFGFRTAFGGGKSTGFGLIYDNIDAFKKFEPKHRLIRAGL 104
>UniRef50_Q8SR06 Cluster: 40S RIBOSOMAL PROTEIN S24; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S24
- Encephalitozoon cuniculi
Length = 126
Score = 48.8 bits (111), Expect = 2e-05
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = +3
Query: 90 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNF 239
NRLL+RK++ HPG P SK EIREK++++Y+ D V V K +
Sbjct: 8 NRLLSRKELDVVAYHPGMPIPSKEEIREKISELYQTKKDNVVVMDLKNRY 57
>UniRef50_A0BWM9 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 182
Score = 47.6 bits (108), Expect = 6e-05
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = +3
Query: 57 TATIRTRKFMTNRLLA-RKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKT 233
T ++TRK + + L R+Q+ ++LHP KPT S+ + ++LA YK V V+G +T
Sbjct: 34 TFIVKTRKVLLKQSLEIRRQLSVELLHPNKPTPSQESVVKELASKYKADERNVVVYGLRT 93
Query: 234 NF 239
F
Sbjct: 94 TF 95
Score = 39.9 bits (89), Expect = 0.011
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +2
Query: 254 TGFALIYDTLDLAKKFEPKHRLARHGL 334
TGFALIYDT KFEPK RL R G+
Sbjct: 101 TGFALIYDTQQYLLKFEPKFRLRRRGI 127
>UniRef50_Q9UY20 Cluster: 30S ribosomal protein S24e; n=4;
Thermococcaceae|Rep: 30S ribosomal protein S24e -
Pyrococcus abyssi
Length = 99
Score = 42.7 bits (96), Expect = 0.002
Identities = 16/58 (27%), Positives = 34/58 (58%)
Frame = +3
Query: 66 IRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNF 239
I+ + N+L+ RK++ ++ HPG+PT S+ +++ KL M + P+ + ++ F
Sbjct: 3 IKITEVKENKLIGRKEIYFEIYHPGEPTPSRKDVKGKLVAMLDLNPETTVIQYIRSYF 60
>UniRef50_P34582 Cluster: Uncharacterized protein T26G10.3; n=1;
Caenorhabditis elegans|Rep: Uncharacterized protein
T26G10.3 - Caenorhabditis elegans
Length = 91
Score = 42.3 bits (95), Expect = 0.002
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +3
Query: 114 MVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVV 212
MV +V+ PG+PT K +IREK+A Y + PD +
Sbjct: 1 MVAEVILPGRPTTLKADIREKIANFYNINPDTM 33
>UniRef50_A3H8R4 Cluster: 30S ribosomal protein S24e; n=1;
Caldivirga maquilingensis IC-167|Rep: 30S ribosomal
protein S24e - Caldivirga maquilingensis IC-167
Length = 155
Score = 39.1 bits (87), Expect = 0.020
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +3
Query: 54 GTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKT 233
G ++ + N LL RK++ V H G PT + ++RE+LAK P++ +V T
Sbjct: 36 GKVQVKVIEQFNNPLLQRKEVKAIVYHVGLPTPQRLQLREELAKALGSNPELTYVTHVYT 95
Query: 234 NF 239
+
Sbjct: 96 QY 97
>UniRef50_Q8ZV65 Cluster: 30S ribosomal protein S24e; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S24e -
Pyrobaculum aerophilum
Length = 121
Score = 37.1 bits (82), Expect = 0.080
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +3
Query: 90 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNF 239
N+LLAR++++ + +H T ++ +RE +AK + VFV KT F
Sbjct: 14 NKLLARRELLVEAVHQNASTPTRQSVREWVAKQLGIDISNVFVRRIKTEF 63
>UniRef50_A4YIV8 Cluster: Ribosomal protein S24E-like protein; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S24E-like protein - Metallosphaera sedula DSM 5348
Length = 113
Score = 34.3 bits (75), Expect = 0.56
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +3
Query: 90 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNF 239
N+++ RK++ V H G PT S+ +IR+ ++ D+V + T +
Sbjct: 23 NKVIGRKEIKIKVYHIGSPTPSRADIRKAISSFIGAKEDLVVIRKINTGY 72
>UniRef50_A6TKB5 Cluster: Putative uncharacterized protein; n=1;
Alkaliphilus metalliredigens QYMF|Rep: Putative
uncharacterized protein - Alkaliphilus metalliredigens
QYMF
Length = 59
Score = 33.9 bits (74), Expect = 0.75
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = -2
Query: 296 SWPDRVCRRSKRIQ*XATSEVCLETEYEHYIGSNL 192
S PD+VC +KRIQ A E + +Y+ Y+GS L
Sbjct: 21 SEPDKVCICAKRIQFLAEKEALAKEDYKRYLGSVL 55
>UniRef50_A1ZRP2 Cluster: Von Willebrand factor type A domain protein;
n=1; Microscilla marina ATCC 23134|Rep: Von Willebrand
factor type A domain protein - Microscilla marina ATCC
23134
Length = 1088
Score = 33.9 bits (74), Expect = 0.75
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = -3
Query: 280 CVVDQSESSXLPPPKFVLKPNTNTTSGVTLYILASFSRISVLLTVGFPGCKTSQ 119
C D + LPPPK V+K +TN GV + + F+ +++L + G +S+
Sbjct: 875 CDCDSYKIKQLPPPKIVIKTDTN-YQGVNMTSMKGFAHNNLMLLLDVSGSMSSK 927
>UniRef50_Q1XFY8 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 204
Score = 33.5 bits (73), Expect = 0.98
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 257 GFALIYDTLDLAKKFEPKH 313
GF L+YDT D A K++P+H
Sbjct: 54 GFTLVYDTFDFANKYQPEH 72
>UniRef50_A1RXC7 Cluster: 30S ribosomal protein S24e; n=1;
Thermofilum pendens Hrk 5|Rep: 30S ribosomal protein
S24e - Thermofilum pendens (strain Hrk 5)
Length = 106
Score = 33.5 bits (73), Expect = 0.98
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +2
Query: 161 RDP*EARQNVQGYSRCSVRIRFQDKLRRWQXTGFALI--YDTLDLAKKFEPKHRLARHGL 334
RD EA +N+ G ++ +R + R Q ALI YD+ K FEPKH L R+GL
Sbjct: 37 RDVAEALRNMLGTGGSAIVVR-KLVTRYGQGVSEALIHIYDSDVKMKMFEPKHILRRNGL 95
Query: 335 YEE 343
+E
Sbjct: 96 IQE 98
>UniRef50_Q7QAG9 Cluster: ENSANGP00000021262; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000021262 - Anopheles gambiae
str. PEST
Length = 1960
Score = 32.7 bits (71), Expect = 1.7
Identities = 18/64 (28%), Positives = 34/64 (53%)
Frame = -3
Query: 244 PPKFVLKPNTNTTSGVTLYILASFSRISVLLTVGFPGCKTSQTICLRANNLLVMNLRVRI 65
PP+ V KP TN + TL +L F+ + ++ G P K+++ + + N + ++V +
Sbjct: 10 PPRAVAKPRTNESREPTLVLLGPFTPKATVVFEGVPVGKSARRLLIVRNTNKTL-VQVNL 68
Query: 64 VAVP 53
VP
Sbjct: 69 TRVP 72
>UniRef50_Q22D17 Cluster: Protein kinase domain containing protein;
n=1; Tetrahymena thermophila SB210|Rep: Protein kinase
domain containing protein - Tetrahymena thermophila
SB210
Length = 389
Score = 31.9 bits (69), Expect = 3.0
Identities = 22/67 (32%), Positives = 33/67 (49%)
Frame = -3
Query: 289 QIECVVDQSESSXLPPPKFVLKPNTNTTSGVTLYILASFSRISVLLTVGFPGCKTSQTIC 110
QI C ++QS+ L + N N + + +LAS S L + +P KT Q+IC
Sbjct: 161 QINCDINQSKFLTLIKANQSNQTNQNYYQSIKVILLASLLA-SYLFSFIYPQIKTIQSIC 219
Query: 109 LRANNLL 89
L NL+
Sbjct: 220 LIHLNLI 226
>UniRef50_Q9RTG6 Cluster: Putative uncharacterized protein; n=1;
Deinococcus radiodurans|Rep: Putative uncharacterized
protein - Deinococcus radiodurans
Length = 111
Score = 31.5 bits (68), Expect = 4.0
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = -2
Query: 338 RTGRGGLTCAWARTSWPDRVCRRSKRIQ*XATSEVCLETE 219
RTGRG CA + W ++ RR+ R Q A SE+ L+T+
Sbjct: 58 RTGRGVYVCADSPACWQEKPLRRAFRAQASAVSEL-LKTQ 96
>UniRef50_Q975Q9 Cluster: 30S ribosomal protein S24e; n=3;
Sulfolobus|Rep: 30S ribosomal protein S24e - Sulfolobus
tokodaii
Length = 120
Score = 31.1 bits (67), Expect = 5.3
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +3
Query: 42 KMSEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFV 218
K+SE I R + N ++ R+++ V H G T+S+ ++ + +A Y D+V +
Sbjct: 10 KISEKAEGIVERD-IKNNVIGRRELYIKVFHIGSGTISRKDMIKAIASSYGAQEDLVVI 67
>UniRef50_Q74M50 Cluster: 30S ribosomal protein S24e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S24e -
Nanoarchaeum equitans
Length = 94
Score = 31.1 bits (67), Expect = 5.3
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 90 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV 197
N+L R + + V HP + T ++ E +EK+A+M V
Sbjct: 12 NKLFDRTEYIIQVEHPKEKTPTREEAKEKIAEMLNV 47
>UniRef50_Q893C3 Cluster: Dipeptide transport ATP-binding protein
dppF; n=3; Clostridiales|Rep: Dipeptide transport
ATP-binding protein dppF - Clostridium tetani
Length = 200
Score = 30.7 bits (66), Expect = 6.9
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 132 HPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFK 230
HP K K +RE LA+ YK + D++ FG K
Sbjct: 81 HPEKAINPKWRMREVLAESYKPSQDILDAFGIK 113
>UniRef50_A4FJP7 Cluster: Putative uncharacterized protein; n=1;
Saccharopolyspora erythraea NRRL 2338|Rep: Putative
uncharacterized protein - Saccharopolyspora erythraea
(strain NRRL 23338)
Length = 374
Score = 30.7 bits (66), Expect = 6.9
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = -1
Query: 300 NFLARSSVS*IKANPVXCHLRSLS*NRIRTLHRE*PCTFWRASHGSRS 157
N LAR S NP+ ++ LS RT P T+WR G+ +
Sbjct: 235 NALARQKASVTLKNPIGLYIGGLSTGDFRTPDGSDPATYWRYVRGAEN 282
>UniRef50_Q6IKD3 Cluster: HDC12791; n=1; Drosophila
melanogaster|Rep: HDC12791 - Drosophila melanogaster
(Fruit fly)
Length = 143
Score = 30.7 bits (66), Expect = 6.9
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Frame = -2
Query: 320 LTCAWARTSWPDRVCRRSKRIQ*XATSEVCLETEYEHYIGSNLVHFG-ELLTDLGLADGW 144
L CAW W R ++RI A + E E YI + G + + + G GW
Sbjct: 69 LPCAWVNRGWDGRAMSSARRIPEQAAQDSAARCEREPYIHIPFNNAGVQWMREGGWVAGW 128
Query: 143 F 141
+
Sbjct: 129 W 129
>UniRef50_Q29FD3 Cluster: GA12452-PA; n=1; Drosophila
pseudoobscura|Rep: GA12452-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 226
Score = 30.7 bits (66), Expect = 6.9
Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
Frame = +2
Query: 59 SDYSHSQVHDQQIVGAQADGLRCFTSRKTNRQQDRDP*EARQNVQGYSRCSVRIRFQDKL 238
S YS SQ H QQ ++ + R +N+Q +R +N Q SR R +
Sbjct: 123 STYSSSQKHHQQHNSSKGNSERKSKPSSSNKQNNRGNHSRVENNQTRSRNRTTNRTPRGM 182
Query: 239 RRWQXTGFALIYDTLDLAKKFEPKHRL-ARHGLYEE 343
+R+ F + D K + K+ + H L EE
Sbjct: 183 QRYNTNQFENDAELKDYKSKIKNKYNIDYDHSLDEE 218
>UniRef50_Q8TVD8 Cluster: 30S ribosomal protein S24e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S24e -
Methanopyrus kandleri
Length = 116
Score = 30.7 bits (66), Expect = 6.9
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 90 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNF 239
N LL RK++ V H T K+E+ KLA + V +VV + ++ F
Sbjct: 11 NPLLYRKEVKFVVRHEDSGTPQKSEVLRKLAAILDVDKEVVLIDRMESEF 60
>UniRef50_Q4D9V8 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 539
Score = 30.3 bits (65), Expect = 9.2
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -1
Query: 189 TFWRASHGSRSC*RLVFLDVKHRKPSACAPTICWS*TCEC 70
T W AS G SC R V PS C+ + C+S +C C
Sbjct: 84 TSWSASDGGCSCCRGV--GQSSSSPSCCSCSSCFSRSCSC 121
>UniRef50_Q4JB69 Cluster: Conserved Crenarchaeal membrane protein;
n=1; Sulfolobus acidocaldarius|Rep: Conserved
Crenarchaeal membrane protein - Sulfolobus
acidocaldarius
Length = 260
Score = 30.3 bits (65), Expect = 9.2
Identities = 16/30 (53%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = -2
Query: 209 YIGSNLVHFGELLTDLGLA-DGWFSWM*NI 123
Y+G L+ GELL+ LG+ DG+FSW+ NI
Sbjct: 56 YLGV-LLFLGELLSLLGVTWDGYFSWLNNI 84
>UniRef50_Q8WTC1 Cluster: 28S ribosomal protein S15, mitochondrial
precursor; n=6; Endopterygota|Rep: 28S ribosomal protein
S15, mitochondrial precursor - Drosophila melanogaster
(Fruit fly)
Length = 280
Score = 30.3 bits (65), Expect = 9.2
Identities = 18/59 (30%), Positives = 24/59 (40%)
Frame = +2
Query: 137 RKTNRQQDRDP*EARQNVQGYSRCSVRIRFQDKLRRWQXTGFALIYDTLDLAKKFEPKH 313
R+ D+ P + V+ R +F LRRW F I + LDL K P H
Sbjct: 122 RRYQEHMDKHPRDKMIKVRLKELIDKRKKFLKYLRRWDYPRFEWILEKLDLVYKPPPTH 180
>UniRef50_Q9YCY0 Cluster: 30S ribosomal protein S24e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S24e -
Aeropyrum pernix
Length = 118
Score = 30.3 bits (65), Expect = 9.2
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +3
Query: 90 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNF 239
N L+ R+++V + H KPT + +R+KLA++ V +++ KT +
Sbjct: 28 NPLVKRREIVMILHHELKPTPMRIMLRQKLAEVLGVDIKRIYIRYIKTGY 77
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 347,150,616
Number of Sequences: 1657284
Number of extensions: 6087766
Number of successful extensions: 16911
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 16621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16904
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 10703468375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -