Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10642X
         (345 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    23   0.88 
AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax prot...    23   0.88 
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   2.7  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   3.6  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   3.6  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    20   8.2  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    20   8.2  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    20   8.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    20   8.2  

>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 23.0 bits (47), Expect = 0.88
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 272 YDTLDLAKKFEPKHRLAR 325
           Y TL+L K+F   H L R
Sbjct: 233 YQTLELEKEFHTNHYLTR 250


>AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax
           protein.
          Length = 96

 Score = 23.0 bits (47), Expect = 0.88
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 272 YDTLDLAKKFEPKHRLAR 325
           Y TL+L K+F   H L R
Sbjct: 15  YQTLELEKEFHTNHYLTR 32


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.4 bits (43), Expect = 2.7
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +2

Query: 53  RNSDYSHSQVHDQQIVGAQADGLRCFTS 136
           R  DY +  + DQ +V    +G+R  +S
Sbjct: 178 RCKDYKNEDLEDQPVVYNDVNGVRINSS 205


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 313 VLGLELLGQIECVVDQSESSXLPP 242
           VLGL   G+   + D+S+ +  PP
Sbjct: 294 VLGLPTFGRAWAMDDESDINGTPP 317


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 84  MTNRLLARKQMVCDVLHPGKPTV 152
           +TN+     Q++ + LH  KPTV
Sbjct: 134 LTNKSNGNGQIMLNSLHKYKPTV 156


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 235 TSEVAXHWIRFDLR 276
           TSE+  H IRF  +
Sbjct: 268 TSEIVDHGIRFSFK 281


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 235 TSEVAXHWIRFDLR 276
           TSE+  H IRF  +
Sbjct: 268 TSEIVDHGIRFSFK 281


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 235 TSEVAXHWIRFDLR 276
           TSE+  H IRF  +
Sbjct: 268 TSEIVDHGIRFSFK 281


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = -3

Query: 247 PPPKFVLKPNTNTTSGVTLYILASFSRISVLLTVGFP 137
           P P+     NTNT++  T     + S +++L+    P
Sbjct: 419 PQPQITSPSNTNTSTSSTNSNKPNSSDLNMLIKETMP 455



 Score = 19.8 bits (39), Expect = 8.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 144  PTVSKTEIREKLAKMYKVTPDVV 212
            P +SK   R  L+KM+ V   V+
Sbjct: 1062 PFISKGAYRHHLSKMHFVKDGVI 1084


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,609
Number of Sequences: 336
Number of extensions: 1579
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6770240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)