Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10642X
         (345 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113512-1|AAM29517.1|  131|Drosophila melanogaster RE59324p pro...   118   2e-27
AE013599-3424|AAF46871.1|  131|Drosophila melanogaster CG3751-PA...   118   2e-27
AY060712-1|AAL28260.1|  280|Drosophila melanogaster GH15448p pro...    30   0.70 
AF435962-1|AAL31972.1|  280|Drosophila melanogaster mitochondria...    30   0.70 
AE013599-3422|AAF46869.1|  280|Drosophila melanogaster CG4207-PA...    30   0.70 

>AY113512-1|AAM29517.1|  131|Drosophila melanogaster RE59324p
           protein.
          Length = 131

 Score =  118 bits (284), Expect = 2e-27
 Identities = 56/65 (86%), Positives = 59/65 (90%)
 Frame = +3

Query: 45  MSEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFG 224
           MS  TATIRTRKFMTNRLLARKQMVCDVLHPG  +V+KTEIREKLA MYKVTPDVVF FG
Sbjct: 1   MSGTTATIRTRKFMTNRLLARKQMVCDVLHPGLSSVNKTEIREKLAAMYKVTPDVVFAFG 60

Query: 225 FKTNF 239
           F+TNF
Sbjct: 61  FRTNF 65



 Score = 61.3 bits (142), Expect = 3e-10
 Identities = 26/30 (86%), Positives = 29/30 (96%)
 Frame = +2

Query: 254 TGFALIYDTLDLAKKFEPKHRLARHGLYEE 343
           TGFALIYDTLD AKKFEPK+RLARHGL+E+
Sbjct: 71  TGFALIYDTLDFAKKFEPKYRLARHGLFEQ 100


>AE013599-3424|AAF46871.1|  131|Drosophila melanogaster CG3751-PA
           protein.
          Length = 131

 Score =  118 bits (284), Expect = 2e-27
 Identities = 56/65 (86%), Positives = 59/65 (90%)
 Frame = +3

Query: 45  MSEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFG 224
           MS  TATIRTRKFMTNRLLARKQMVCDVLHPG  +V+KTEIREKLA MYKVTPDVVF FG
Sbjct: 1   MSGTTATIRTRKFMTNRLLARKQMVCDVLHPGLSSVNKTEIREKLAAMYKVTPDVVFAFG 60

Query: 225 FKTNF 239
           F+TNF
Sbjct: 61  FRTNF 65



 Score = 61.3 bits (142), Expect = 3e-10
 Identities = 26/30 (86%), Positives = 29/30 (96%)
 Frame = +2

Query: 254 TGFALIYDTLDLAKKFEPKHRLARHGLYEE 343
           TGFALIYDTLD AKKFEPK+RLARHGL+E+
Sbjct: 71  TGFALIYDTLDFAKKFEPKYRLARHGLFEQ 100


>AY060712-1|AAL28260.1|  280|Drosophila melanogaster GH15448p
           protein.
          Length = 280

 Score = 30.3 bits (65), Expect = 0.70
 Identities = 18/59 (30%), Positives = 24/59 (40%)
 Frame = +2

Query: 137 RKTNRQQDRDP*EARQNVQGYSRCSVRIRFQDKLRRWQXTGFALIYDTLDLAKKFEPKH 313
           R+     D+ P +    V+       R +F   LRRW    F  I + LDL  K  P H
Sbjct: 122 RRYQEHMDKHPRDKMIKVRLKELIDKRKKFLKYLRRWDYPRFEWILEKLDLVYKPPPTH 180


>AF435962-1|AAL31972.1|  280|Drosophila melanogaster mitochondrial
           ribosomal proteinS15 protein.
          Length = 280

 Score = 30.3 bits (65), Expect = 0.70
 Identities = 18/59 (30%), Positives = 24/59 (40%)
 Frame = +2

Query: 137 RKTNRQQDRDP*EARQNVQGYSRCSVRIRFQDKLRRWQXTGFALIYDTLDLAKKFEPKH 313
           R+     D+ P +    V+       R +F   LRRW    F  I + LDL  K  P H
Sbjct: 122 RRYQEHMDKHPRDKMIKVRLKELIDKRKKFLKYLRRWDYPRFEWILEKLDLVYKPPPTH 180


>AE013599-3422|AAF46869.1|  280|Drosophila melanogaster CG4207-PA
           protein.
          Length = 280

 Score = 30.3 bits (65), Expect = 0.70
 Identities = 18/59 (30%), Positives = 24/59 (40%)
 Frame = +2

Query: 137 RKTNRQQDRDP*EARQNVQGYSRCSVRIRFQDKLRRWQXTGFALIYDTLDLAKKFEPKH 313
           R+     D+ P +    V+       R +F   LRRW    F  I + LDL  K  P H
Sbjct: 122 RRYQEHMDKHPRDKMIKVRLKELIDKRKKFLKYLRRWDYPRFEWILEKLDLVYKPPPTH 180


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,667,436
Number of Sequences: 53049
Number of extensions: 288193
Number of successful extensions: 724
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 724
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 819378027
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)