Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10636X
         (376 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1286 + 36000741-36000796,36000885-36000939,36001036-360010...    27   6.3  

>01_06_1286 +
           36000741-36000796,36000885-36000939,36001036-36001086,
           36001962-36002053,36002301-36002378,36002778-36002931
          Length = 161

 Score = 26.6 bits (56), Expect = 6.3
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = -3

Query: 236 IQYKLYTFI*YRYKNKYSLHTKLI 165
           + +KL+T + YRYKN+   +T+L+
Sbjct: 72  VVHKLFTELAYRYKNRAGGYTRLL 95


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,728,070
Number of Sequences: 37544
Number of extensions: 115644
Number of successful extensions: 169
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 169
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 600754600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)