Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10636X
         (376 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g48530.1 68414.m05426 hypothetical protein                          27   5.4  
At5g03420.1 68418.m00295 dentin sialophosphoprotein-related cont...    26   9.4  

>At1g48530.1 68414.m05426 hypothetical protein
          Length = 164

 Score = 26.6 bits (56), Expect = 5.4
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +1

Query: 163 GINLVCREYLFLYRYYINVYNLYCIEMMHSVVVEATVCDQKK 288
           G N    EY F+Y+  +  Y + C+ M   ++V+A   D K+
Sbjct: 66  GWNEFDEEYAFVYKCPVKRYLVKCLAMNDKLLVDAIAEDGKE 107


>At5g03420.1 68418.m00295 dentin sialophosphoprotein-related
           contains weak similarity to Swiss-Prot:Q9NZW4 dentin
           sialophosphoprotein precursor [Homo sapiens]
          Length = 583

 Score = 25.8 bits (54), Expect = 9.4
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -1

Query: 289 LFFDHTLSPRQQHYASSRYNINYIHLYNIDIKINTLYTLS 170
           L FDH  SP   HY S   N     + ++DI   + Y L+
Sbjct: 257 LTFDHYTSPTSNHYTSPDLN----SIKHVDIATGSSYDLT 292


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,175,386
Number of Sequences: 28952
Number of extensions: 93496
Number of successful extensions: 124
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 124
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 507810264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)