Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10635
         (435 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    40   1e-05
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    33   0.001
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   6.7  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   6.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   8.9  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        20   8.9  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    20   8.9  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 39.5 bits (88), Expect = 1e-05
 Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 18/88 (20%)
 Frame = +2

Query: 23  PSRLMLPKGTYDGFPFQLFVFVYPY---------EPTPKESEPF----KSVVPDNKPFGY 163
           P  ++LPKGT  G+P  LFV +  Y           T  + + F      + PD +  GY
Sbjct: 582 PQHMLLPKGTEAGYPCHLFVMISNYADDRVEQDTSGTCSDGDTFCGIKDKLYPDRRSMGY 641

Query: 164 PFDRPVLP-----QYFKQPNMFFKKVLV 232
           PFDR         Q F  PNM  ++V++
Sbjct: 642 PFDRMPRDGVDTLQQFLTPNMRVQEVVI 669


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 33.1 bits (72), Expect = 0.001
 Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 13/64 (20%)
 Frame = +2

Query: 23  PSRLMLPKGTYDGFPFQLFVFVYPYEPTPKESEP-------------FKSVVPDNKPFGY 163
           P  +++PKGT +G   QLFV +  Y+    +                   + PD +  GY
Sbjct: 583 PQHMLIPKGTPEGMKSQLFVMISNYDDDKIDQSTEGVCNDAGSYCGIKDKLYPDRRSMGY 642

Query: 164 PFDR 175
           PFDR
Sbjct: 643 PFDR 646


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +2

Query: 236 HEGELFPIYLTFLTIHQIKRNYNAL 310
           H G L      FLT+ +IK++ + +
Sbjct: 217 HRGLLLDTARNFLTVSKIKKHIDGM 241


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 9/16 (56%), Positives = 11/16 (68%), Gaps = 1/16 (6%)
 Frame = -3

Query: 67  GESIV-CTLRQHQPRR 23
           G  IV C LR+H+P R
Sbjct: 101 GPPIVRCALRKHKPNR 116


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 63  NPSYVPLGSISLEGIVSEELN 1
           NP   P G+   EGI S+  N
Sbjct: 551 NPPTKPYGTCRSEGIFSDPKN 571


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 101 PTPKESEPFKSVVP 142
           PTP E+  F++V+P
Sbjct: 420 PTPPEAPLFQNVLP 433


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 98  EPTPKESEPFKSV 136
           +P PKE  PF +V
Sbjct: 475 DPNPKEKTPFINV 487


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,975
Number of Sequences: 336
Number of extensions: 1971
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9670396
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)