BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10633X
(335 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058404-1|AAL13633.1| 554|Drosophila melanogaster GH17632p pro... 30 0.86
AE014297-2945|AAF55861.2| 554|Drosophila melanogaster CG10824-P... 30 0.86
AE014298-1446|AAF46580.1| 351|Drosophila melanogaster CG2898-PA... 28 2.6
AY118655-1|AAM50024.1| 698|Drosophila melanogaster SD07306p pro... 27 8.0
AF197910-1|AAF15596.1| 1490|Drosophila melanogaster Numb-associa... 27 8.0
AE014134-3002|AAS64718.1| 698|Drosophila melanogaster CG10637-P... 27 8.0
AE014134-3000|AAF53727.2| 1488|Drosophila melanogaster CG10637-P... 27 8.0
>AY058404-1|AAL13633.1| 554|Drosophila melanogaster GH17632p
protein.
Length = 554
Score = 29.9 bits (64), Expect = 0.86
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = -1
Query: 173 YVHTQSCQYHVVQVLGISSSSGYQFRATAKARHMVGTS*NSDVTNLR 33
Y H +C Y + + G+ SSS + A+ ++ + +S S+V LR
Sbjct: 462 YFHGIACMYRLPEKEGVDSSSSSEISASVESSPITSSSDPSEVDKLR 508
>AE014297-2945|AAF55861.2| 554|Drosophila melanogaster CG10824-PA
protein.
Length = 554
Score = 29.9 bits (64), Expect = 0.86
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = -1
Query: 173 YVHTQSCQYHVVQVLGISSSSGYQFRATAKARHMVGTS*NSDVTNLR 33
Y H +C Y + + G+ SSS + A+ ++ + +S S+V LR
Sbjct: 462 YFHGIACMYRLPEKEGVDSSSSSEISASVESSPITSSSDPSEVDKLR 508
>AE014298-1446|AAF46580.1| 351|Drosophila melanogaster CG2898-PA
protein.
Length = 351
Score = 28.3 bits (60), Expect = 2.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -2
Query: 64 PRRTVTSQTYERRRHPQP 11
PRRT+T+Q Y RR P+P
Sbjct: 255 PRRTITAQIYCTRRVPEP 272
>AY118655-1|AAM50024.1| 698|Drosophila melanogaster SD07306p
protein.
Length = 698
Score = 26.6 bits (56), Expect = 8.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 65 YQPCDVP*QLL*IDNPKTNLFQVPVPH 145
+Q C+V +L DNP NL + P+P+
Sbjct: 308 WQVCEVAFRLAGKDNPVQNLHKTPIPN 334
>AF197910-1|AAF15596.1| 1490|Drosophila melanogaster Numb-associated
kinase protein.
Length = 1490
Score = 26.6 bits (56), Expect = 8.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 65 YQPCDVP*QLL*IDNPKTNLFQVPVPH 145
+Q C+V +L DNP NL + P+P+
Sbjct: 308 WQVCEVAFRLAGKDNPVQNLHKTPIPN 334
>AE014134-3002|AAS64718.1| 698|Drosophila melanogaster CG10637-PC,
isoform C protein.
Length = 698
Score = 26.6 bits (56), Expect = 8.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 65 YQPCDVP*QLL*IDNPKTNLFQVPVPH 145
+Q C+V +L DNP NL + P+P+
Sbjct: 308 WQVCEVAFRLAGKDNPVQNLHKTPIPN 334
>AE014134-3000|AAF53727.2| 1488|Drosophila melanogaster CG10637-PA,
isoform A protein.
Length = 1488
Score = 26.6 bits (56), Expect = 8.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 65 YQPCDVP*QLL*IDNPKTNLFQVPVPH 145
+Q C+V +L DNP NL + P+P+
Sbjct: 308 WQVCEVAFRLAGKDNPVQNLHKTPIPN 334
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,142,921
Number of Sequences: 53049
Number of extensions: 279586
Number of successful extensions: 671
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 671
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 756348948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -