Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10633X
         (335 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    25   0.24 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    25   0.24 
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    21   5.3  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    20   7.0  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    20   7.0  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          20   9.2  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 25.0 bits (52), Expect = 0.24
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 108 TRRRTYSKYLYHMILTGLCVYIR 176
           T+RRT     YH+ LT L + +R
Sbjct: 907 TKRRTMKVVKYHLFLTNLYIQMR 929


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
            isoform A protein.
          Length = 969

 Score = 25.0 bits (52), Expect = 0.24
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 108  TRRRTYSKYLYHMILTGLCVYIR 176
            T+RRT     YH+ LT L + +R
Sbjct: 945  TKRRTMKVVKYHLFLTNLYIQMR 967


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 20.6 bits (41), Expect = 5.3
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 284 LTGIRVWFIHKFFSFI 237
           LT I  WF+HK  + I
Sbjct: 273 LTKIDKWFLHKMKNII 288


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +2

Query: 104 DNPKTNLFQV 133
           +NPKTN F +
Sbjct: 412 ENPKTNFFSI 421


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = -2

Query: 274 FVCGLFINSFHLFIYYLIIYLQTKSIEQSPVYVRM 170
           F   LF+  F  +  Y    +QTKS++     V M
Sbjct: 215 FYLPLFVMVFTYYKIYRAAVIQTKSLKLGTKQVLM 249


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = -1

Query: 296 VHKSLTGIRVWFIHKFFSFIHLL 228
           +H+    + VW+ HK   +  LL
Sbjct: 62  IHRKKVLLLVWWDHKGIVYFELL 84


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,739
Number of Sequences: 438
Number of extensions: 1782
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7591023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)