Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10627
         (755 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       26   0.37 
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    26   0.37 
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    26   0.37 
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    26   0.37 
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    26   0.37 
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    26   0.37 
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           26   0.37 
AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax pr...    26   0.37 
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    26   0.37 
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    26   0.37 
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    26   0.37 
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    26   0.37 
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    25   0.86 
AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax prot...    25   0.86 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.6  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    22   6.1  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   6.1  

>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 537 EIAHSLCCTLSNHKLWYNH 593
           EIAH+LC T    K+W+ +
Sbjct: 38  EIAHALCLTERQIKIWFQN 56


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 537 EIAHSLCCTLSNHKLWYNH 593
           EIAH+LC T    K+W+ +
Sbjct: 252 EIAHALCLTERQIKIWFQN 270


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 537 EIAHSLCCTLSNHKLWYNH 593
           EIAH+LC T    K+W+ +
Sbjct: 252 EIAHALCLTERQIKIWFQN 270


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 537 EIAHSLCCTLSNHKLWYNH 593
           EIAH+LC T    K+W+ +
Sbjct: 274 EIAHALCLTERQIKIWFQN 292


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 537 EIAHSLCCTLSNHKLWYNH 593
           EIAH+LC T    K+W+ +
Sbjct: 252 EIAHALCLTERQIKIWFQN 270


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 537 EIAHSLCCTLSNHKLWYNH 593
           EIAH+LC T    K+W+ +
Sbjct: 208 EIAHALCLTERQIKIWFQN 226


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 537 EIAHSLCCTLSNHKLWYNH 593
           EIAH+LC T    K+W+ +
Sbjct: 252 EIAHALCLTERQIKIWFQN 270


>AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax
           protein.
          Length = 100

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 537 EIAHSLCCTLSNHKLWYNH 593
           EIAH+LC T    K+W+ +
Sbjct: 40  EIAHALCLTERQIKIWFQN 58


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 537 EIAHSLCCTLSNHKLWYNH 593
           EIAH+LC T    K+W+ +
Sbjct: 276 EIAHALCLTERQIKIWFQN 294


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 537 EIAHSLCCTLSNHKLWYNH 593
           EIAH+LC T    K+W+ +
Sbjct: 252 EIAHALCLTERQIKIWFQN 270


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 537 EIAHSLCCTLSNHKLWYNH 593
           EIAH+LC T    K+W+ +
Sbjct: 189 EIAHALCLTERQIKIWFQN 207


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 537 EIAHSLCCTLSNHKLWYNH 593
           EIAH+LC T    K+W+ +
Sbjct: 248 EIAHALCLTERQIKIWFQN 266


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 24.6 bits (51), Expect = 0.86
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 537 EIAHSLCCTLSNHKLWYNH 593
           E+AH+LC T    K+W+ +
Sbjct: 255 EMAHALCLTERQIKIWFQN 273


>AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax
           protein.
          Length = 96

 Score = 24.6 bits (51), Expect = 0.86
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 537 EIAHSLCCTLSNHKLWYNH 593
           E+AH+LC T    K+W+ +
Sbjct: 37  EMAHALCLTERQIKIWFQN 55


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/63 (15%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
 Frame = -1

Query: 476 FEHLCS-VLFKPLRIYCATLFYVNIFL*IFIIDKWDNLPIYFIPELTKWDKTFSTSNIDI 300
           +   C+ ++F    ++C    + N+ L   +   +  L + F+P +  +   F    I +
Sbjct: 167 YHFFCAFIIFTMHLLFCCAFIFFNMHLLFLLCLDYFTLHLLFLPCIYYFYSAFIIFTIHL 226

Query: 299 IYF 291
           +++
Sbjct: 227 LFY 229


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/30 (23%), Positives = 16/30 (53%)
 Frame = -1

Query: 374 DNLPIYFIPELTKWDKTFSTSNIDIIYFLN 285
           +N P+Y+    T W + +   N  ++ ++N
Sbjct: 216 ENSPLYWGGADTPWQREYENVNSTVVNWVN 245


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -2

Query: 436 FIVQHCSMLIFFCKFLL*TNGTICLYI 356
           F+ +HC   + FC      NG +C  I
Sbjct: 330 FMGRHCESKVNFCATSPCQNGGVCTTI 356


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,839
Number of Sequences: 336
Number of extensions: 4176
Number of successful extensions: 19
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)