Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10627
         (755 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    26   1.4  
AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeo...    26   1.4  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    26   1.4  
AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax home...    25   3.3  
AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax home...    25   3.3  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    23   7.7  

>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 537 EIAHSLCCTLSNHKLWYNH 593
           EIAH+LC T    K+W+ +
Sbjct: 170 EIAHALCLTERQIKIWFQN 188


>AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeotic
           protein protein.
          Length = 324

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 537 EIAHSLCCTLSNHKLWYNH 593
           EIAH+LC T    K+W+ +
Sbjct: 276 EIAHALCLTERQIKIWFQN 294


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 537 EIAHSLCCTLSNHKLWYNH 593
           EIAH+LC T    K+W+ +
Sbjct: 312 EIAHALCLTERQIKIWFQN 330


>AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax
           homeotic protein IVa protein.
          Length = 310

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 537 EIAHSLCCTLSNHKLWYNH 593
           E+AH+LC T    K+W+ +
Sbjct: 251 EMAHALCLTERQIKIWFQN 269


>AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax
           homeotic protein IIa protein.
          Length = 327

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 537 EIAHSLCCTLSNHKLWYNH 593
           E+AH+LC T    K+W+ +
Sbjct: 268 EMAHALCLTERQIKIWFQN 286


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -3

Query: 153 LVNCSV*KVLFILLWREIFNRFR 85
           ++ CSV ++L +L+   + NRFR
Sbjct: 564 IIFCSVYRILGVLILSALANRFR 586


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 770,078
Number of Sequences: 2352
Number of extensions: 15287
Number of successful extensions: 21
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78170964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)