Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10627
         (755 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL023821-2|CAA19437.2|  355|Caenorhabditis elegans Hypothetical ...    29   4.7  
Z81583-6|CAB04674.1|  397|Caenorhabditis elegans Hypothetical pr...    28   6.2  

>AL023821-2|CAA19437.2|  355|Caenorhabditis elegans Hypothetical
           protein Y102A5B.3 protein.
          Length = 355

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +3

Query: 339 CKFRNKIYRQIVPFVYNKNLQKNINIEQCCT 431
           C  +N I  ++ P +Y+KN +KN N   C T
Sbjct: 216 CNQQNSILCELPPTIYDKNCEKNFN-NHCYT 245


>Z81583-6|CAB04674.1|  397|Caenorhabditis elegans Hypothetical
           protein T02G6.6 protein.
          Length = 397

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 240 MEVNKLTNYNNCKVVVQKINDI 305
           MEV +L  Y NC +  +KIN++
Sbjct: 288 MEVKRLEVYKNCSITCKKINEL 309


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,693,587
Number of Sequences: 27780
Number of extensions: 351614
Number of successful extensions: 792
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 792
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)