Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10620
         (745 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4T4T3 Cluster: Chromosome undetermined SCAF9551, whole...    40   0.085
UniRef50_Q9VRY6 Cluster: CG10103-PA; n=6; Endopterygota|Rep: CG1...    39   0.15 
UniRef50_UPI0000D563D1 Cluster: PREDICTED: hypothetical protein ...    38   0.20 
UniRef50_P53990 Cluster: Uncharacterized protein KIAA0174; n=34;...    37   0.46 
UniRef50_UPI0000E49FDA Cluster: PREDICTED: similar to KIAA0174 p...    37   0.60 

>UniRef50_Q4T4T3 Cluster: Chromosome undetermined SCAF9551, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF9551,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 333

 Score = 39.5 bits (88), Expect = 0.085
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = +3

Query: 135 PGPSDEIDFDDLNRRFEKLKKK 200
           P  SD+IDFDDL RRFE+LKKK
Sbjct: 311 PTNSDDIDFDDLTRRFEELKKK 332


>UniRef50_Q9VRY6 Cluster: CG10103-PA; n=6; Endopterygota|Rep:
           CG10103-PA - Drosophila melanogaster (Fruit fly)
          Length = 417

 Score = 38.7 bits (86), Expect = 0.15
 Identities = 16/19 (84%), Positives = 18/19 (94%)
 Frame = +3

Query: 147 DEIDFDDLNRRFEKLKKKK 203
           DEIDFDDL+RRFE LKK+K
Sbjct: 399 DEIDFDDLSRRFENLKKRK 417


>UniRef50_UPI0000D563D1 Cluster: PREDICTED: hypothetical protein
           isoform 3; n=1; Tribolium castaneum|Rep: PREDICTED:
           hypothetical protein isoform 3 - Tribolium castaneum
          Length = 78

 Score = 38.3 bits (85), Expect = 0.20
 Identities = 16/22 (72%), Positives = 18/22 (81%)
 Frame = +3

Query: 135 PGPSDEIDFDDLNRRFEKLKKK 200
           P  SD+IDFDDL RRF +LKKK
Sbjct: 56  PDASDDIDFDDLTRRFNELKKK 77


>UniRef50_P53990 Cluster: Uncharacterized protein KIAA0174; n=34;
           Coelomata|Rep: Uncharacterized protein KIAA0174 - Homo
           sapiens (Human)
          Length = 364

 Score = 37.1 bits (82), Expect = 0.46
 Identities = 15/19 (78%), Positives = 19/19 (100%)
 Frame = +3

Query: 144 SDEIDFDDLNRRFEKLKKK 200
           S++IDFDDL+RRFE+LKKK
Sbjct: 345 SEDIDFDDLSRRFEELKKK 363


>UniRef50_UPI0000E49FDA Cluster: PREDICTED: similar to KIAA0174
           protein; n=3; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to KIAA0174 protein -
           Strongylocentrotus purpuratus
          Length = 107

 Score = 36.7 bits (81), Expect = 0.60
 Identities = 14/19 (73%), Positives = 18/19 (94%)
 Frame = +3

Query: 147 DEIDFDDLNRRFEKLKKKK 203
           +++DFDDL RRFE+LKKKK
Sbjct: 89  EDVDFDDLTRRFEELKKKK 107


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 474,844,608
Number of Sequences: 1657284
Number of extensions: 7428854
Number of successful extensions: 12884
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12376
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12883
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60911752460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)