Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10611
         (340 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6S3W2 Cluster: Putative uncharacterized protein; n=2; ...    33   1.3  
UniRef50_Q0V1F5 Cluster: Putative uncharacterized protein; n=1; ...    32   2.2  
UniRef50_A0BQR6 Cluster: Chromosome undetermined scaffold_121, w...    31   3.8  
UniRef50_UPI00004998D8 Cluster: ribophorin I; n=2; Entamoeba his...    30   8.8  
UniRef50_Q5BHV3 Cluster: AT06470p; n=8; Diptera|Rep: AT06470p - ...    30   8.8  

>UniRef50_A6S3W2 Cluster: Putative uncharacterized protein; n=2;
           Sclerotiniaceae|Rep: Putative uncharacterized protein -
           Botryotinia fuckeliana B05.10
          Length = 529

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 17/52 (32%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
 Frame = -1

Query: 223 WWAKVP-AIVKYSAVETISGCFYNKKDYSHYWIGCFSLYTMLPNKLSS*VND 71
           +WA V   +   S+ +TI+  +Y + + SH+W G +S Y  +P+++S+ V D
Sbjct: 77  YWAAVGFGLPTNSSCDTINAGYYCQPEISHFW-GQYSPYFSVPSEISAAVPD 127


>UniRef50_Q0V1F5 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 196

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = -1

Query: 250 SLELLVRKHWWAKVPAIVKYSAVETISGCFY 158
           +LELL+R+HW+ +V  +++Y  +    G FY
Sbjct: 163 NLELLLRRHWFGRVWYVLQYPLLLDTKGLFY 193


>UniRef50_A0BQR6 Cluster: Chromosome undetermined scaffold_121,
           whole genome shotgun sequence; n=3; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_121,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 354

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +1

Query: 103 ASYTKRNIQSNNDYSLFCCKNTQISFRRPNISQWPVLLPT 222
           +S+T +NI  NN Y     K  Q+ F +P+ S + V L T
Sbjct: 278 SSFTSQNIDQNNSYGAILVKPEQLLFFQPHPSPYYVFLYT 317


>UniRef50_UPI00004998D8 Cluster: ribophorin I; n=2; Entamoeba
           histolytica HM-1:IMSS|Rep: ribophorin I - Entamoeba
           histolytica HM-1:IMSS
          Length = 522

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = +1

Query: 103 ASYTKRNIQSNNDYSLFCCKNTQISFRRPNISQWPVLLPTNASLQV 240
           A+ TK  ++ N D++ F  +  + S    ++ Q+   LP N SLQ+
Sbjct: 16  ATITKNQVEVNIDFTPFPKRTMEFSVEGDHLKQYHFTLPLNESLQM 61


>UniRef50_Q5BHV3 Cluster: AT06470p; n=8; Diptera|Rep: AT06470p -
           Drosophila melanogaster (Fruit fly)
          Length = 1017

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -3

Query: 287 MNYVILRHNLRIITRTTCKEALVGKSTGHCEIFGRRNDIWVFL 159
           +NYV  R+N    T   C E L+   T + E + R+ D W+ L
Sbjct: 669 INYVDTRNNPE--TAPDCTECLLRSITNYAERYPRQQDAWILL 709


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 270,024,511
Number of Sequences: 1657284
Number of extensions: 4793844
Number of successful extensions: 10727
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10727
length of database: 575,637,011
effective HSP length: 88
effective length of database: 429,796,019
effective search space used: 10315104456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)