Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10611
         (340 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC119695-1|AAI19696.1|   81|Homo sapiens MOBP protein protein.         28   8.5  
BC119694-1|AAI19695.1|   81|Homo sapiens MOBP protein protein.         28   8.5  
BC075796-1|AAH75796.1|   81|Homo sapiens MOBP protein protein.         28   8.5  
BC022471-1|AAH22471.1|   81|Homo sapiens myelin-associated oligo...    28   8.5  

>BC119695-1|AAI19696.1|   81|Homo sapiens MOBP protein protein.
          Length = 81

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = -1

Query: 196 KYSAVETISGCFYNKKDYSHYWIGCFSLYTMLPNKL 89
           KYS  +  SGCFY KK+    WI C    T L  K+
Sbjct: 43  KYSICK--SGCFYQKKEED--WICCACQKTRLKRKI 74


>BC119694-1|AAI19695.1|   81|Homo sapiens MOBP protein protein.
          Length = 81

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = -1

Query: 196 KYSAVETISGCFYNKKDYSHYWIGCFSLYTMLPNKL 89
           KYS  +  SGCFY KK+    WI C    T L  K+
Sbjct: 43  KYSICK--SGCFYQKKEED--WICCACQKTRLKRKI 74


>BC075796-1|AAH75796.1|   81|Homo sapiens MOBP protein protein.
          Length = 81

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = -1

Query: 196 KYSAVETISGCFYNKKDYSHYWIGCFSLYTMLPNKL 89
           KYS  +  SGCFY KK+    WI C    T L  K+
Sbjct: 43  KYSICK--SGCFYQKKEED--WICCACQKTRLKRKI 74


>BC022471-1|AAH22471.1|   81|Homo sapiens myelin-associated
           oligodendrocyte basic protein protein.
          Length = 81

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = -1

Query: 196 KYSAVETISGCFYNKKDYSHYWIGCFSLYTMLPNKL 89
           KYS  +  SGCFY KK+    WI C    T L  K+
Sbjct: 43  KYSICK--SGCFYQKKEED--WICCACQKTRLKRKI 74


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,669,050
Number of Sequences: 237096
Number of extensions: 703433
Number of successful extensions: 1144
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1144
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1852524224
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)