Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10611
(340 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT021471-1|AAX33619.1| 1017|Drosophila melanogaster AT06470p pro... 30 0.67
AY075231-1|AAL68098.1| 711|Drosophila melanogaster AT19020p pro... 30 0.67
AE014134-200|AAF51420.1| 1017|Drosophila melanogaster CG14339-PA... 30 0.67
BT010299-1|AAQ23617.1| 1075|Drosophila melanogaster LD10322p pro... 27 6.2
BT003522-1|AAO39526.1| 972|Drosophila melanogaster RE22501p pro... 27 6.2
AY051896-1|AAK93320.1| 1420|Drosophila melanogaster LD38533p pro... 27 6.2
AF241366-1|AAF98388.1| 813|Drosophila melanogaster cleavage and... 27 6.2
AE014297-2687|AAN13804.1| 926|Drosophila melanogaster CG16718-P... 27 6.2
AE014297-2686|AAF55685.1| 1075|Drosophila melanogaster CG16718-P... 27 6.2
AE013599-1901|AAF58240.1| 1455|Drosophila melanogaster CG10110-P... 27 6.2
AE013599-1900|AAM68553.1| 1420|Drosophila melanogaster CG10110-P... 27 6.2
M20630-1|AAA28397.1| 675|Drosophila melanogaster protein ( D.me... 27 8.2
AE013599-3619|AAF47020.3| 675|Drosophila melanogaster CG17632-P... 27 8.2
>BT021471-1|AAX33619.1| 1017|Drosophila melanogaster AT06470p
protein.
Length = 1017
Score = 30.3 bits (65), Expect = 0.67
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -3
Query: 287 MNYVILRHNLRIITRTTCKEALVGKSTGHCEIFGRRNDIWVFL 159
+NYV R+N T C E L+ T + E + R+ D W+ L
Sbjct: 669 INYVDTRNNPE--TAPDCTECLLRSITNYAERYPRQQDAWILL 709
>AY075231-1|AAL68098.1| 711|Drosophila melanogaster AT19020p
protein.
Length = 711
Score = 30.3 bits (65), Expect = 0.67
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -3
Query: 287 MNYVILRHNLRIITRTTCKEALVGKSTGHCEIFGRRNDIWVFL 159
+NYV R+N T C E L+ T + E + R+ D W+ L
Sbjct: 363 INYVDTRNNPE--TAPDCTECLLRSITNYAERYPRQQDAWILL 403
>AE014134-200|AAF51420.1| 1017|Drosophila melanogaster CG14339-PA
protein.
Length = 1017
Score = 30.3 bits (65), Expect = 0.67
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -3
Query: 287 MNYVILRHNLRIITRTTCKEALVGKSTGHCEIFGRRNDIWVFL 159
+NYV R+N T C E L+ T + E + R+ D W+ L
Sbjct: 669 INYVDTRNNPE--TAPDCTECLLRSITNYAERYPRQQDAWILL 709
>BT010299-1|AAQ23617.1| 1075|Drosophila melanogaster LD10322p
protein.
Length = 1075
Score = 27.1 bits (57), Expect = 6.2
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = -1
Query: 250 SLELLVRKHWWAKVPAIVKYSAVETISGCFYNKKDYSHYWIGCFSLYTML 101
++ L+ KHW A VP +Y ++ I F K W+G ++ +L
Sbjct: 383 TMRALLYKHW-ASVPKWYRYQPLDDIKEYFGVKIGLYFAWLGYYTYMLLL 431
>BT003522-1|AAO39526.1| 972|Drosophila melanogaster RE22501p
protein.
Length = 972
Score = 27.1 bits (57), Expect = 6.2
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = -1
Query: 250 SLELLVRKHWWAKVPAIVKYSAVETISGCFYNKKDYSHYWIGCFSLYTML 101
++ L+ KHW A VP +Y ++ I F K W+G ++ +L
Sbjct: 280 TMRALLYKHW-ASVPKWYRYQPLDDIKEYFGVKIGLYFAWLGYYTYMLLL 328
>AY051896-1|AAK93320.1| 1420|Drosophila melanogaster LD38533p
protein.
Length = 1420
Score = 27.1 bits (57), Expect = 6.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 241 LLVRKHWWAKVPAIVKYSAVETISGCFYNKKD 146
L + KH + PA+V SA + +SG F K D
Sbjct: 652 LAINKHTISSSPAVVAISAYKDLSGLFTVKGD 683
>AF241366-1|AAF98388.1| 813|Drosophila melanogaster cleavage and
polyadenylation specificityfactor protein.
Length = 813
Score = 27.1 bits (57), Expect = 6.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 241 LLVRKHWWAKVPAIVKYSAVETISGCFYNKKD 146
L + KH + PA+V SA + +SG F K D
Sbjct: 45 LAINKHTISSSPAVVAISAYKDLSGLFTVKGD 76
>AE014297-2687|AAN13804.1| 926|Drosophila melanogaster CG16718-PB,
isoform B protein.
Length = 926
Score = 27.1 bits (57), Expect = 6.2
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = -1
Query: 250 SLELLVRKHWWAKVPAIVKYSAVETISGCFYNKKDYSHYWIGCFSLYTML 101
++ L+ KHW A VP +Y ++ I F K W+G ++ +L
Sbjct: 234 TMRALLYKHW-ASVPKWYRYQPLDDIKEYFGVKIGLYFAWLGYYTYMLLL 282
>AE014297-2686|AAF55685.1| 1075|Drosophila melanogaster CG16718-PA,
isoform A protein.
Length = 1075
Score = 27.1 bits (57), Expect = 6.2
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = -1
Query: 250 SLELLVRKHWWAKVPAIVKYSAVETISGCFYNKKDYSHYWIGCFSLYTML 101
++ L+ KHW A VP +Y ++ I F K W+G ++ +L
Sbjct: 383 TMRALLYKHW-ASVPKWYRYQPLDDIKEYFGVKIGLYFAWLGYYTYMLLL 431
>AE013599-1901|AAF58240.1| 1455|Drosophila melanogaster CG10110-PA,
isoform A protein.
Length = 1455
Score = 27.1 bits (57), Expect = 6.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 241 LLVRKHWWAKVPAIVKYSAVETISGCFYNKKD 146
L + KH + PA+V SA + +SG F K D
Sbjct: 687 LAINKHTISSSPAVVAISAYKDLSGLFTVKGD 718
>AE013599-1900|AAM68553.1| 1420|Drosophila melanogaster CG10110-PB,
isoform B protein.
Length = 1420
Score = 27.1 bits (57), Expect = 6.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 241 LLVRKHWWAKVPAIVKYSAVETISGCFYNKKD 146
L + KH + PA+V SA + +SG F K D
Sbjct: 652 LAINKHTISSSPAVVAISAYKDLSGLFTVKGD 683
>M20630-1|AAA28397.1| 675|Drosophila melanogaster protein (
D.melanogaster brown(bw) mRNA encoding brown protein,
complete cds. ).
Length = 675
Score = 26.6 bits (56), Expect = 8.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 190 SAVETISGCFYNKKDYSHYWIGCFSL 113
+ VE + Y DY+ YW+ CFSL
Sbjct: 626 TGVEVLQQGSYRNADYT-YWLDCFSL 650
>AE013599-3619|AAF47020.3| 675|Drosophila melanogaster CG17632-PA
protein.
Length = 675
Score = 26.6 bits (56), Expect = 8.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 190 SAVETISGCFYNKKDYSHYWIGCFSL 113
+ VE + Y DY+ YW+ CFSL
Sbjct: 626 TGVEVLQQGSYRNADYT-YWLDCFSL 650
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,929,330
Number of Sequences: 53049
Number of extensions: 218661
Number of successful extensions: 485
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 485
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 777358641
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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