Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10608
         (690 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    24   1.0  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    23   3.1  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   4.1  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    22   5.4  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   5.4  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   5.4  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   5.4  

>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -3

Query: 478 TSSIFCVMDSWWERRPGN 425
           T  + C   SW  +RPGN
Sbjct: 22  TDKVICYYASWGAQRPGN 39


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = -3

Query: 478 TSSIFCVMDSWWERRPGN 425
           +  I C   SW   RPGN
Sbjct: 20  SDKIICYYASWGANRPGN 37


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3

Query: 469 IFCVMDSWWERRPG 428
           + C + SW ++RPG
Sbjct: 524 VLCYITSWSQKRPG 537


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -2

Query: 326 DKLFVLIQFFQSL 288
           D LF+LIQ F SL
Sbjct: 298 DLLFILIQLFNSL 310


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -2

Query: 326 DKLFVLIQFFQSL 288
           D LF+LIQ F SL
Sbjct: 298 DLLFILIQLFNSL 310


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -2

Query: 326 DKLFVLIQFFQSL 288
           D LF+LIQ F SL
Sbjct: 298 DLLFILIQLFNSL 310


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -2

Query: 326 DKLFVLIQFFQSL 288
           D LF+LIQ F SL
Sbjct: 296 DLLFILIQLFNSL 308


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,541
Number of Sequences: 336
Number of extensions: 3585
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)