Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10607
(320 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62913 Cluster: 60S ribosomal protein L11; n=156; Eukar... 159 8e-39
UniRef50_UPI000155375A Cluster: PREDICTED: similar to ribosomal ... 153 7e-37
UniRef50_P42794 Cluster: 60S ribosomal protein L11-2; n=38; Euka... 142 1e-33
UniRef50_P0C0W9 Cluster: 60S ribosomal protein L11-A; n=25; Euka... 132 1e-30
UniRef50_Q74N79 Cluster: 50S ribosomal protein L5P; n=1; Nanoarc... 83 1e-15
UniRef50_O28367 Cluster: 50S ribosomal protein L5P; n=1; Archaeo... 83 2e-15
UniRef50_A3H987 Cluster: Ribosomal protein L5; n=1; Caldivirga m... 81 4e-15
UniRef50_Q673R5 Cluster: Ribosomal protein L5/L11; n=2; environm... 81 5e-15
UniRef50_UPI00015BB1AB Cluster: LSU ribosomal protein L5P; n=1; ... 81 6e-15
UniRef50_Q8PV37 Cluster: 50S ribosomal protein L5P; n=6; Methano... 79 2e-14
UniRef50_A5UL75 Cluster: Ribosomal protein L5p; n=1; Methanobrev... 78 3e-14
UniRef50_Q46GA8 Cluster: 50S ribosomal protein L5P; n=3; Methano... 77 8e-14
UniRef50_P14124 Cluster: 50S ribosomal protein L5P; n=5; Halobac... 77 8e-14
UniRef50_Q6LXE0 Cluster: 50S ribosomal protein L5P; n=7; Euryarc... 76 1e-13
UniRef50_A0RVY6 Cluster: Ribosomal protein L5; n=1; Cenarchaeum ... 75 4e-13
UniRef50_A7DSY1 Cluster: Ribosomal protein L5; n=1; Candidatus N... 70 1e-11
UniRef50_Q9YF87 Cluster: 50S ribosomal protein L5P; n=20; Archae... 67 8e-11
UniRef50_A0DI11 Cluster: Chromosome undetermined scaffold_51, wh... 64 6e-10
UniRef50_Q6L1B4 Cluster: 50S ribosomal protein L5P; n=4; Thermop... 60 7e-09
UniRef50_Q6CKT5 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 57 7e-08
UniRef50_Q01C63 Cluster: Chromosome 03 contig 1, DNA sequence; n... 52 3e-06
UniRef50_Q3LWF5 Cluster: Ribosomal protein L11; n=1; Bigelowiell... 51 4e-06
UniRef50_Q42196 Cluster: 60S ribosomal protein L11; n=1; Arabido... 45 4e-04
UniRef50_Q7R5U0 Cluster: GLP_81_173473_174138; n=1; Giardia lamb... 39 0.019
UniRef50_Q61E12 Cluster: Putative uncharacterized protein CBG122... 33 0.93
UniRef50_Q4QE06 Cluster: GPI-anchor transamidase subunit 8 (GPI8... 33 0.93
UniRef50_A6D0I6 Cluster: Putative uncharacterized protein; n=1; ... 33 1.2
UniRef50_A4PID3 Cluster: Chitinase; n=1; Monochamus alternatus|R... 33 1.6
UniRef50_Q4FLN0 Cluster: 50S ribosomal protein L5; n=3; Bacteria... 32 2.1
UniRef50_Q30TV2 Cluster: 50S ribosomal protein L5; n=2; Epsilonp... 32 2.8
UniRef50_Q2XNF8 Cluster: Nonribosomal peptide synthetase-polyket... 31 4.9
UniRef50_A0X5X1 Cluster: Flp pilus assembly protein ATPase CpaE-... 31 6.5
UniRef50_Q6IHQ1 Cluster: HDC01725; n=1; Drosophila melanogaster|... 30 8.6
>UniRef50_P62913 Cluster: 60S ribosomal protein L11; n=156;
Eukaryota|Rep: 60S ribosomal protein L11 - Homo sapiens
(Human)
Length = 178
Score = 159 bits (387), Expect = 8e-39
Identities = 69/88 (78%), Positives = 81/88 (92%)
Frame = +3
Query: 3 EYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGK 182
EYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGF++A ++R+TG
Sbjct: 91 EYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGC 150
Query: 183 VGFPHRLTKEDAMKWFQQKYDGIILIAK 266
+G HR++KE+AM+WFQQKYDGIIL K
Sbjct: 151 IGAKHRISKEEAMRWFQQKYDGIILPGK 178
>UniRef50_UPI000155375A Cluster: PREDICTED: similar to ribosomal
protein L11; n=1; Mus musculus|Rep: PREDICTED: similar
to ribosomal protein L11 - Mus musculus
Length = 279
Score = 153 bits (371), Expect = 7e-37
Identities = 67/88 (76%), Positives = 79/88 (89%)
Frame = +3
Query: 3 EYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGK 182
EYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGR GF++A ++R+TG
Sbjct: 145 EYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRSGFSIADKKRRTGC 204
Query: 183 VGFPHRLTKEDAMKWFQQKYDGIILIAK 266
+G HR++KE+AM+WFQQKY GIIL K
Sbjct: 205 IGAKHRISKEEAMRWFQQKYAGIILPGK 232
>UniRef50_P42794 Cluster: 60S ribosomal protein L11-2; n=38;
Eukaryota|Rep: 60S ribosomal protein L11-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 182
Score = 142 bits (344), Expect = 1e-33
Identities = 65/90 (72%), Positives = 73/90 (81%)
Frame = +3
Query: 3 EYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGK 182
EYEL R NFS TG FGFGIQEHIDLGIKYDPS GIYG+DFYVVL RPG+ VA RRR +
Sbjct: 90 EYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRCKTR 149
Query: 183 VGFPHRLTKEDAMKWFQQKYDGIILIAKQS 272
VG HR+TK+DAMKWFQ KY+G+IL Q+
Sbjct: 150 VGIQHRVTKDDAMKWFQVKYEGVILNKSQN 179
>UniRef50_P0C0W9 Cluster: 60S ribosomal protein L11-A; n=25;
Eukaryota|Rep: 60S ribosomal protein L11-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 174
Score = 132 bits (319), Expect = 1e-30
Identities = 58/85 (68%), Positives = 67/85 (78%)
Frame = +3
Query: 3 EYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGK 182
EY+LR NFSATGNFGFGI EHIDLGIKYDPSIGI+G+DFYVV+ RPG V R+R G
Sbjct: 88 EYQLRDRNFSATGNFGFGIDEHIDLGIKYDPSIGIFGMDFYVVMNRPGARVTRRKRCKGT 147
Query: 183 VGFPHRLTKEDAMKWFQQKYDGIIL 257
VG H+ TKED + WF+QKYD +L
Sbjct: 148 VGNSHKTTKEDTVSWFKQKYDADVL 172
>UniRef50_Q74N79 Cluster: 50S ribosomal protein L5P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L5P -
Nanoarchaeum equitans
Length = 169
Score = 83.0 bits (196), Expect = 1e-15
Identities = 38/80 (47%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
Frame = +3
Query: 3 EYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTG 179
+++++ +F+ G FGFGI E+I + G+KYDP +G+ GL+ YV L RPG+ V RR K
Sbjct: 85 DFKIKASSFTDRG-FGFGIPEYIMIPGMKYDPELGLIGLEAYVTLERPGYRVERRRIKRS 143
Query: 180 KVGFPHRLTKEDAMKWFQQK 239
KVG HRL KE+ +KW Q++
Sbjct: 144 KVGSRHRLNKEEIIKWAQEE 163
>UniRef50_O28367 Cluster: 50S ribosomal protein L5P; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L5P -
Archaeoglobus fulgidus
Length = 178
Score = 82.6 bits (195), Expect = 2e-15
Identities = 36/66 (54%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Frame = +3
Query: 39 GNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKED 215
G F FGI EHIDL G+ YDP +GI+G+D V L R G+ VA RRRK K+ HR+TKED
Sbjct: 106 GYFAFGIAEHIDLPGVDYDPDVGIFGMDVCVSLKRRGYRVARRRRKKAKIATSHRVTKED 165
Query: 216 AMKWFQ 233
++W +
Sbjct: 166 TIRWLE 171
>UniRef50_A3H987 Cluster: Ribosomal protein L5; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L5 -
Caldivirga maquilingensis IC-167
Length = 197
Score = 81.4 bits (192), Expect = 4e-15
Identities = 37/78 (47%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Frame = +3
Query: 3 EYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTG 179
++ LR ++F+A GN FGI+EHI + G +YDP++GI+G D V L RPGF V +RRR
Sbjct: 111 DFTLREESFNA-GNVSFGIREHILVPGSRYDPALGIFGFDVAVTLARPGFRVQYRRRARA 169
Query: 180 KVGFPHRLTKEDAMKWFQ 233
VG HR+++E+ +++FQ
Sbjct: 170 DVGKDHRVSREETIRFFQ 187
>UniRef50_Q673R5 Cluster: Ribosomal protein L5/L11; n=2;
environmental samples|Rep: Ribosomal protein L5/L11 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 168
Score = 81.0 bits (191), Expect = 5e-15
Identities = 37/80 (46%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Frame = +3
Query: 24 NFSATGNFGFGIQEHIDLGI-KYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHR 200
NF +GN FGI ++ D KYDP IGIYG+D VVL RPG V+ RRR+ KVG HR
Sbjct: 88 NFDQSGNLSFGIADYTDFPAQKYDPDIGIYGMDVNVVLERPGHRVSRRRRRGVKVGVEHR 147
Query: 201 LTKEDAMKWFQQKYDGIILI 260
+ K+++ WF+ ++ G+ ++
Sbjct: 148 VGKDESKAWFKDQF-GLTIV 166
>UniRef50_UPI00015BB1AB Cluster: LSU ribosomal protein L5P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L5P - Ignicoccus hospitalis KIN4/I
Length = 198
Score = 80.6 bits (190), Expect = 6e-15
Identities = 33/80 (41%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Frame = +3
Query: 6 YELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGK 182
++++ +F GN GFGI+EHI + G +YDP +GI+G+D + + RPG+ VA RRR K
Sbjct: 113 WKIKASSFDEFGNVGFGIREHIQIPGTRYDPRVGIFGMDVILTIERPGYRVARRRRARSK 172
Query: 183 VGFPHRLTKEDAMKWFQQKY 242
+ HR+TKE++M + +++
Sbjct: 173 IPRRHRVTKEESMVFLAKEF 192
>UniRef50_Q8PV37 Cluster: 50S ribosomal protein L5P; n=6;
Methanomicrobia|Rep: 50S ribosomal protein L5P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 169
Score = 78.6 bits (185), Expect = 2e-14
Identities = 36/81 (44%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = +3
Query: 3 EYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTG 179
E L R F + GN FGI+EH D G++YDP+IG++G+D VVL RPG + RR T
Sbjct: 84 EKTLSRAQFDSLGNVSFGIEEHTDFPGMRYDPNIGVFGMDVTVVLKRPGERICKRRIATR 143
Query: 180 KVGFPHRLTKEDAMKWFQQKY 242
K+ HR+T +DA+ + + Y
Sbjct: 144 KIPTDHRVTVDDAIAFLNESY 164
>UniRef50_A5UL75 Cluster: Ribosomal protein L5p; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Ribosomal
protein L5p - Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861)
Length = 170
Score = 78.2 bits (184), Expect = 3e-14
Identities = 33/79 (41%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Frame = +3
Query: 12 LRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVG 188
++ F A GN FGI+EHID+ G+KY+P IGI+G++ V +PG+ +A RR + KV
Sbjct: 86 IKPTQFDAQGNLSFGIKEHIDIPGMKYNPDIGIFGMNVSVTFEKPGYRIAKRRIQQKKVP 145
Query: 189 FPHRLTKEDAMKWFQQKYD 245
HR++KE+ MK+ + ++
Sbjct: 146 AKHRISKEETMKYMEDNFN 164
>UniRef50_Q46GA8 Cluster: 50S ribosomal protein L5P; n=3;
Methanomicrobia|Rep: 50S ribosomal protein L5P -
Methanosarcina barkeri (strain Fusaro / DSM 804)
Length = 169
Score = 77.0 bits (181), Expect = 8e-14
Identities = 35/78 (44%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Frame = +3
Query: 12 LRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVG 188
L R F + GN FGI+EH D G+KYDP+IG++G+D VV+ RPG + RR T K+
Sbjct: 87 LVRSQFDSLGNVSFGIEEHTDFPGMKYDPNIGVFGMDVTVVIKRPGERICKRRIATRKIP 146
Query: 189 FPHRLTKEDAMKWFQQKY 242
HR+T ED++ + Y
Sbjct: 147 TNHRVTLEDSIAFLNDSY 164
>UniRef50_P14124 Cluster: 50S ribosomal protein L5P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 177
Score = 77.0 bits (181), Expect = 8e-14
Identities = 37/80 (46%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = +3
Query: 9 ELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKV 185
EL F TGNF FG++EH + +YDPSIGIYGLD V L RPG+ VA R + + +
Sbjct: 93 ELATSQFDDTGNFSFGVEEHTEFPSQEYDPSIGIYGLDVTVNLVRPGYRVAKRDKASRSI 152
Query: 186 GFPHRLTKEDAMKWFQQKYD 245
HRL DA+ + + YD
Sbjct: 153 PTKHRLNPADAVAFIESTYD 172
>UniRef50_Q6LXE0 Cluster: 50S ribosomal protein L5P; n=7;
Euryarchaeota|Rep: 50S ribosomal protein L5P -
Methanococcus maripaludis
Length = 181
Score = 76.2 bits (179), Expect = 1e-13
Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Frame = +3
Query: 24 NFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHR 200
+F GNF FG+ EHID G KYDPS+GIYG+D V + G+ V R+ K + H
Sbjct: 101 SFDQVGNFSFGVPEHIDFPGQKYDPSVGIYGMDICVTFEKSGYRVKSRKVKRSHIPEKHL 160
Query: 201 LTKEDAMKWFQQKYD 245
+TK++A+++ Q K+D
Sbjct: 161 VTKDEAIEYIQAKFD 175
>UniRef50_A0RVY6 Cluster: Ribosomal protein L5; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L5 - Cenarchaeum
symbiosum
Length = 169
Score = 74.5 bits (175), Expect = 4e-13
Identities = 34/79 (43%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Frame = +3
Query: 9 ELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKV 185
+++ +F GNF FGI EHID+ GIKYDP IGI GLD + L RPG+ + R + +V
Sbjct: 86 QVKGRSFDDFGNFSFGIGEHIDIPGIKYDPGIGILGLDVCMTLSRPGYGIRKRSKHKARV 145
Query: 186 GFPHRLTKEDAMKWFQQKY 242
G HR+T +A + +++
Sbjct: 146 GRSHRITATEAKDFVVREF 164
>UniRef50_A7DSY1 Cluster: Ribosomal protein L5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 173
Score = 69.7 bits (163), Expect = 1e-11
Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Frame = +3
Query: 21 DNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPH 197
DNF GN+ FGI+EHID+ G+KY+PSIGI GL V L RPG+ + R + VG H
Sbjct: 97 DNF---GNYSFGIREHIDIPGVKYEPSIGILGLGISVTLTRPGYGIRTRSKHKASVGKSH 153
Query: 198 RLTKEDAMKWFQQKY 242
+T ++A + +++
Sbjct: 154 IITSQEAKDYLVKEF 168
>UniRef50_Q9YF87 Cluster: 50S ribosomal protein L5P; n=20;
Archaea|Rep: 50S ribosomal protein L5P - Aeropyrum
pernix
Length = 192
Score = 66.9 bits (156), Expect = 8e-11
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Frame = +3
Query: 6 YELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVLGRPGFNVAHRRR-KTG 179
+ ++ + GN FGI+EHI + G+KYDP +GI G+D + + RPG + RRR + G
Sbjct: 107 HRIKTSSIDEHGNVSFGIEEHILIPGVKYDPRVGILGMDVAITIQRPGHRIVERRRQRRG 166
Query: 180 KVGFPHRLTKEDAMKWFQQKY 242
+ HR+T+E+ M Q +
Sbjct: 167 HIPRRHRVTREETMVLLNQLF 187
>UniRef50_A0DI11 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_51,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 197
Score = 64.1 bits (149), Expect = 6e-10
Identities = 29/62 (46%), Positives = 39/62 (62%)
Frame = +3
Query: 3 EYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGK 182
E EL++ NFS +GNFGFGIQEHIDLG+KYDP GI+ + + ++ K K
Sbjct: 118 EMELKKRNFSESGNFGFGIQEHIDLGLKYDPYTGIFRYGLLCCVVKTRIESCSKKIKKFK 177
Query: 183 VG 188
+G
Sbjct: 178 IG 179
>UniRef50_Q6L1B4 Cluster: 50S ribosomal protein L5P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L5P -
Picrophilus torridus
Length = 176
Score = 60.5 bits (140), Expect = 7e-09
Identities = 29/83 (34%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Frame = +3
Query: 3 EYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVL-GRPGFNVAHRRRKT 176
+Y++ +F GN FGI ++ D G+KYDP IGI+G+D +V R G+ + RR K
Sbjct: 88 DYKIPVYSFDKNGNAYFGISDYTDFKGMKYDPDIGIFGMDIAIVFRRRGGYRIEKRRIKK 147
Query: 177 GKVGFPHRLTKEDAMKWFQQKYD 245
+ R++KE+ +K+ Q+ ++
Sbjct: 148 MHIPKKMRISKEETIKYLQENFN 170
>UniRef50_Q6CKT5 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 191
Score = 57.2 bits (132), Expect = 7e-08
Identities = 29/82 (35%), Positives = 48/82 (58%)
Frame = -1
Query: 248 TIIFLLEPLHSIFLCEAVGKSHFSCLTPSVCYVETWPAKYDVKVQSINSN*GIVLDTQVN 69
+I+ LLEP +FL V + F + S TW +V++ ++N++ +VLDTQ++
Sbjct: 10 SIVSLLEPSDGVFLGSLVRVTDFRLTSLSSGDSGTWSTHDNVEIHTVNTDTWVVLDTQID 69
Query: 68 VFLNTEAKITRGGEVVTPQFIF 3
VFL+TE ++T EV Q +F
Sbjct: 70 VFLDTETEVTGSREVSVSQLVF 91
>UniRef50_Q01C63 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 363
Score = 51.6 bits (118), Expect = 3e-06
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = -1
Query: 251 DTIIFLLEPLHSIFLCEAVGKSHFSCL-TPSVCYVETWPAKYDVKVQSINSN*GIVLDTQ 75
D + LLEP H I L + V + L TP+V V ++DV++ +++ +VLD +
Sbjct: 38 DALERLLEPSHRISLGKLVLLTDLLLLLTPAVDSVAR-ALQHDVEIHTVDPCGRVVLDAE 96
Query: 74 VNVFLNTEAKITRGGEVVTPQFIF 3
VNVF +TE ++TRG EV +F F
Sbjct: 97 VNVFADTETEVTRGAEVALEEFEF 120
>UniRef50_Q3LWF5 Cluster: Ribosomal protein L11; n=1; Bigelowiella
natans|Rep: Ribosomal protein L11 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 139
Score = 51.2 bits (117), Expect = 4e-06
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = +3
Query: 6 YELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGK 182
+ + NFS T FG GI +H++LG +D IGI+G++ L R G+ + ++ + K
Sbjct: 81 FTINESNFSLTSTFGIGISDHLELGYNFDQKIGIHGINIIGDLSRRGYRIKLKKEQDPK 139
>UniRef50_Q42196 Cluster: 60S ribosomal protein L11; n=1;
Arabidopsis thaliana|Rep: 60S ribosomal protein L11 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 64
Score = 44.8 bits (101), Expect = 4e-04
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +3
Query: 162 RRRKTGKVGFPHRLTKEDAMKWFQQKYDGII 254
RRR + F HR+TK+DAMKWFQ KY+G+I
Sbjct: 18 RRRCRLVLVFQHRVTKDDAMKWFQVKYEGVI 48
>UniRef50_Q7R5U0 Cluster: GLP_81_173473_174138; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_81_173473_174138 - Giardia lamblia
ATCC 50803
Length = 221
Score = 39.1 bits (87), Expect = 0.019
Identities = 19/55 (34%), Positives = 33/55 (60%)
Frame = -1
Query: 173 LTPSVCYVETWPAKYDVKVQSINSN*GIVLDTQVNVFLNTEAKITRGGEVVTPQF 9
L P++ E K V+V +I+++ +VLD ++NVF + E +++ GGE QF
Sbjct: 63 LCPALIDAEPGARKDHVEVHTIDTHGRVVLDPEINVFRDAEPEVSSGGEARVGQF 117
>UniRef50_Q61E12 Cluster: Putative uncharacterized protein CBG12266;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG12266 - Caenorhabditis
briggsae
Length = 418
Score = 33.5 bits (73), Expect = 0.93
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 112 DWTFTSYLAGQVST*HTEGVRQEKWDFPTASQRKML 219
DWTFT++ G V+ E ++EKWDF S +K L
Sbjct: 383 DWTFTTHYKGTVNGLKVE--KREKWDFRKNSAKKSL 416
>UniRef50_Q4QE06 Cluster: GPI-anchor transamidase subunit 8 (GPI8),
putative; n=8; Trypanosomatidae|Rep: GPI-anchor
transamidase subunit 8 (GPI8), putative - Leishmania
major
Length = 357
Score = 33.5 bits (73), Expect = 0.93
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -1
Query: 254 YDTIIFLLEPLHSIFLCEAVGKSHFSCLTPSVCYVETWPAKYD 126
Y ++F+ + H+I LCE V + CL S E++ +YD
Sbjct: 214 YGRVVFMADTCHAIALCEHVEAPNVVCLAASDAESESYSCQYD 256
>UniRef50_A6D0I6 Cluster: Putative uncharacterized protein; n=1;
Vibrio shilonii AK1|Rep: Putative uncharacterized
protein - Vibrio shilonii AK1
Length = 353
Score = 33.1 bits (72), Expect = 1.2
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +3
Query: 9 ELRRDNFSATGNFGFGIQEHIDLGIKYDPSIG--IYGLDFYVVLGRPGFNVAHRRRKTGK 182
E ++D + T + F +++ D+ +YD IG ++G+ G PG +AH R +
Sbjct: 236 EFKKDFPNETLRYSFDAKDYRDIFSEYDLMIGYRVHGIGMCASQGTPGIMIAHDPRASTV 295
Query: 183 VGF 191
GF
Sbjct: 296 KGF 298
>UniRef50_A4PID3 Cluster: Chitinase; n=1; Monochamus alternatus|Rep:
Chitinase - Monochamus alternatus (Japanese pine sawyer)
Length = 371
Score = 32.7 bits (71), Expect = 1.6
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -1
Query: 224 LHSIFLCEAVGKSHFSCLTPSVCYVETWPAKYD 126
L S+ +C AV HF+ T +CY E+W A YD
Sbjct: 3 LKSLLICLAVFIQHFAAGTKVICYYESWNA-YD 34
>UniRef50_Q4FLN0 Cluster: 50S ribosomal protein L5; n=3;
Bacteria|Rep: 50S ribosomal protein L5 - Pelagibacter
ubique
Length = 184
Score = 32.3 bits (70), Expect = 2.1
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 27 FSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFP 194
F GN+ FGI+EHI + +D I GLD VV+ N H K+ FP
Sbjct: 123 FDKFGNYTFGIKEHIIFPEVNFDRIDKIRGLDIVVVIS--ALNKDHSFALLEKLNFP 177
>UniRef50_Q30TV2 Cluster: 50S ribosomal protein L5; n=2;
Epsilonproteobacteria|Rep: 50S ribosomal protein L5 -
Thiomicrospira denitrificans (strain ATCC 33889 / DSM
1351)
Length = 181
Score = 31.9 bits (69), Expect = 2.8
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 18 RDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVV 131
R+ F GN+ FG+QE + + YD + I+G++ VV
Sbjct: 118 RNGFDGRGNYNFGLQEQLIFPEVSYDSVMQIHGMNITVV 156
>UniRef50_Q2XNF8 Cluster: Nonribosomal peptide synthetase-polyketide
synthase hybrid; n=5; Bacteria|Rep: Nonribosomal peptide
synthetase-polyketide synthase hybrid - Lysobacter
lactamgenus
Length = 5049
Score = 31.1 bits (67), Expect = 4.9
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = -1
Query: 140 PAKYDVKVQSINSN*GIVLDTQVNVFLNTEAKITRGGEVV 21
P K+D+++ + S G+VLD + N L EA I R EV+
Sbjct: 459 PVKFDLQLDAFPSAEGLVLDWRYNRSLFDEASIARMAEVM 498
>UniRef50_A0X5X1 Cluster: Flp pilus assembly protein ATPase
CpaE-like; n=1; Shewanella pealeana ATCC 700345|Rep: Flp
pilus assembly protein ATPase CpaE-like - Shewanella
pealeana ATCC 700345
Length = 408
Score = 30.7 bits (66), Expect = 6.5
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = +1
Query: 31 PPRVILASVFKNTLTWVSSTIPQLEFMDWTFTSYLAGQVS 150
P + ++AS TLTW++ ++ Q E + W ++Y Q++
Sbjct: 25 PVQAVVASNGSRTLTWLTESLNQFENLKWQSSTYEDDQLA 64
>UniRef50_Q6IHQ1 Cluster: HDC01725; n=1; Drosophila
melanogaster|Rep: HDC01725 - Drosophila melanogaster
(Fruit fly)
Length = 102
Score = 30.3 bits (65), Expect = 8.6
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -2
Query: 250 IPSYFCWNHFIASSFVRRWGNPTFPVLRLL 161
IP++ WN+ + + GNP FP L+LL
Sbjct: 51 IPTHSRWNYAVPGEAIPTIGNPDFPPLQLL 80
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 308,195,375
Number of Sequences: 1657284
Number of extensions: 6012772
Number of successful extensions: 15250
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 15015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15237
length of database: 575,637,011
effective HSP length: 83
effective length of database: 438,082,439
effective search space used: 10075896097
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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