Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10607
         (320 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0409 - 20503480-20503678,20504522-20504717,20504805-205048...   141   1e-34
01_01_0745 + 5769150-5769152,5769268-5769375,5769812-5769854,576...   141   1e-34
05_02_0095 + 6564703-6564705,6564848-6564955,6565153-6565195,656...    94   3e-20
02_02_0196 + 7685933-7685961,7686086-7686284                           93   4e-20
02_02_0195 + 7676014-7676094,7676111-7676218,7676307-7676349,767...    52   1e-07
01_06_0957 - 33352904-33353212,33353316-33353465,33353544-333536...    27   4.3  

>06_03_0409 -
           20503480-20503678,20504522-20504717,20504805-20504847,
           20505632-20505739,20505848-20505850
          Length = 182

 Score =  141 bits (341), Expect = 1e-34
 Identities = 65/90 (72%), Positives = 72/90 (80%)
 Frame = +3

Query: 3   EYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGK 182
           EYEL R NFS TG FGFGIQEHIDLGIKYDPS GIYG+DFYVVL R G+ VA RRR   +
Sbjct: 90  EYELLRRNFSETGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERAGYRVARRRRCKSR 149

Query: 183 VGFPHRLTKEDAMKWFQQKYDGIILIAKQS 272
           VG  HR+TKEDAMKWFQ KY+G+IL   Q+
Sbjct: 150 VGIQHRVTKEDAMKWFQVKYEGVILNKAQA 179


>01_01_0745 +
           5769150-5769152,5769268-5769375,5769812-5769854,
           5769945-5770140,5770836-5771034
          Length = 182

 Score =  141 bits (341), Expect = 1e-34
 Identities = 65/90 (72%), Positives = 72/90 (80%)
 Frame = +3

Query: 3   EYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGK 182
           EYEL R NFS TG FGFGIQEHIDLGIKYDPS GIYG+DFYVVL R G+ VA RRR   +
Sbjct: 90  EYELLRRNFSETGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERAGYRVARRRRCKSR 149

Query: 183 VGFPHRLTKEDAMKWFQQKYDGIILIAKQS 272
           VG  HR+TKEDAMKWFQ KY+G+IL   Q+
Sbjct: 150 VGIQHRVTKEDAMKWFQVKYEGVILNKAQA 179


>05_02_0095 +
           6564703-6564705,6564848-6564955,6565153-6565195,
           6565303-6565409,6566310-6566395,6566396-6566594
          Length = 181

 Score = 93.9 bits (223), Expect = 3e-20
 Identities = 41/63 (65%), Positives = 49/63 (77%)
 Frame = +3

Query: 84  KYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGIILIA 263
           +YDPS GIYG+DFYVVL R G+ VA RRR   +VG  HR+TKEDAMKWFQ KY+G+IL  
Sbjct: 116 RYDPSTGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNK 175

Query: 264 KQS 272
            Q+
Sbjct: 176 AQA 178


>02_02_0196 + 7685933-7685961,7686086-7686284
          Length = 75

 Score = 93.1 bits (221), Expect = 4e-20
 Identities = 41/62 (66%), Positives = 48/62 (77%)
 Frame = +3

Query: 87  YDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGIILIAK 266
           YDPS GIYG+DFYVVL R G+ VA RRR   +VG  HR+TKEDAMKWFQ KY+G+IL   
Sbjct: 11  YDPSTGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKA 70

Query: 267 QS 272
           Q+
Sbjct: 71  QA 72


>02_02_0195 +
           7676014-7676094,7676111-7676218,7676307-7676349,
           7676449-7676648
          Length = 143

 Score = 52.0 bits (119), Expect = 1e-07
 Identities = 24/28 (85%), Positives = 24/28 (85%)
 Frame = +3

Query: 3   EYELRRDNFSATGNFGFGIQEHIDLGIK 86
           EYEL R NFS TG FGFGIQEHIDLGIK
Sbjct: 116 EYELLRRNFSDTGCFGFGIQEHIDLGIK 143


>01_06_0957 -
           33352904-33353212,33353316-33353465,33353544-33353684,
           33354116-33354709
          Length = 397

 Score = 26.6 bits (56), Expect = 4.3
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +1

Query: 106 FMDWTFTSYLAGQVS--T*HTEGVRQEKWDFPTASQRKML*SGSN 234
           F +W  T+  A  ++  T  T G   ++W   TA+ R+ML  GS+
Sbjct: 106 FPEWLITALFAVFLASATFKTYGTGMKRWRAETAAARRMLEGGSS 150


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,361,425
Number of Sequences: 37544
Number of extensions: 165036
Number of successful extensions: 409
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 409
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 411066120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)