Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10606
         (702 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY745234-1|AAU93513.1|   96|Anopheles gambiae thioredoxin-depend...    82   1e-17
AY800250-1|AAV68043.1|   97|Anopheles gambiae thioredoxin depend...    29   0.19 
CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    28   0.25 
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    27   0.57 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   1.00 
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   9.3  

>AY745234-1|AAU93513.1|   96|Anopheles gambiae thioredoxin-dependent
           peroxidase protein.
          Length = 96

 Score = 82.2 bits (194), Expect = 1e-17
 Identities = 33/45 (73%), Positives = 39/45 (86%)
 Frame = +1

Query: 505 PYGTLRHMSVNDLPVGRSVDETLRLVKAFQFADKHGEVCPAGWNP 639
           P G +R +++NDLPVGRSVDETLRL+KAFQF +KHGEVCPA W P
Sbjct: 50  PAGVVRQITINDLPVGRSVDETLRLIKAFQFVEKHGEVCPANWEP 94



 Score = 81.8 bits (193), Expect = 2e-17
 Identities = 38/49 (77%), Positives = 41/49 (83%)
 Frame = +2

Query: 359 LAWINTPRKDGGLGKMEIPLLADYKKQISKDYDVLLDDGFALRGLFIID 505
           LAWINTPRK GGLGK+E PLLAD  K+IS DY VLL DG +LRGLFIID
Sbjct: 1   LAWINTPRKAGGLGKLEYPLLADLTKRISADYGVLLPDGISLRGLFIID 49


>AY800250-1|AAV68043.1|   97|Anopheles gambiae thioredoxin dependent
           peroxidase protein.
          Length = 97

 Score = 28.7 bits (61), Expect = 0.19
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +1

Query: 550 GRSVDETLRLVKAFQFADKHGEVCPAGWNP 639
           GR+  E LR + + Q  DK     PA W P
Sbjct: 26  GRNFAEILRTIDSMQLTDKRRVATPADWMP 55


>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 28.3 bits (60), Expect = 0.25
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +1

Query: 115 LQELLKFRSLLQTSVRQQLSMESSINLNFQISRENT*FCSSIHWISHC 258
           L  ++  R+L    +   LS+ +S      +SR N    S  HWI HC
Sbjct: 210 LVRIVPRRNLFDHLLPDNLSLFASFVTQHYVSRRNRIIPSLEHWIPHC 257


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 27.1 bits (57), Expect = 0.57
 Identities = 17/39 (43%), Positives = 18/39 (46%)
 Frame = +3

Query: 531 GERSARGPLRGRDAPPGQGLPVRRQARRGVPGRLEPGHQ 647
           GE    G LRG D  PG   P   +   GVPG   PG Q
Sbjct: 317 GEPGVPG-LRGNDGIPGLEGPSGPKGDAGVPGYGRPGPQ 354


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 26.2 bits (55), Expect = 1.00
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +3

Query: 573 PPGQGLPVRRQARRG-VPGRLEPGHQRRHHQAE 668
           PPG  +P+R Q   G VPG ++PG Q R   A+
Sbjct: 221 PPGVPMPMRPQMPPGAVPG-MQPGMQPRPPSAQ 252


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -2

Query: 254 CEIQWIEEQNYVFSRE 207
           C I W+++ N+V SR+
Sbjct: 720 CNIDWLQKINHVTSRQ 735


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 728,847
Number of Sequences: 2352
Number of extensions: 14485
Number of successful extensions: 21
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)