Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10603
(419 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9GP16 Cluster: 60S ribosomal protein L31; n=27; Coelom... 138 3e-32
UniRef50_P62899 Cluster: 60S ribosomal protein L31; n=48; Metazo... 125 3e-28
UniRef50_UPI00005A08CD Cluster: PREDICTED: similar to ribosomal ... 124 1e-27
UniRef50_Q9V597 Cluster: 60S ribosomal protein L31; n=173; Eukar... 110 1e-23
UniRef50_Q9GN74 Cluster: 60S ribosomal protein L31; n=20; Coelom... 109 2e-23
UniRef50_P51420 Cluster: 60S ribosomal protein L31-3; n=12; Euka... 103 1e-21
UniRef50_Q4PI65 Cluster: Putative uncharacterized protein; n=1; ... 100 1e-20
UniRef50_UPI0000D9FB71 Cluster: PREDICTED: similar to ribosomal ... 89 3e-17
UniRef50_Q22DH9 Cluster: 60S ribosomal protein L31, putative; n=... 89 3e-17
UniRef50_UPI0001505641 Cluster: 60S ribosomal protein L31 (RPL31... 81 1e-14
UniRef50_Q7RSL1 Cluster: Ribosomal protein L31e, putative; n=7; ... 81 1e-14
UniRef50_UPI00005A10F5 Cluster: PREDICTED: similar to ribosomal ... 74 1e-12
UniRef50_UPI000049A444 Cluster: 60S ribosomal protein L31; n=2; ... 73 2e-12
UniRef50_UPI0000DA1BEE Cluster: PREDICTED: similar to ribosomal ... 69 4e-11
UniRef50_Q6Y207 Cluster: Ribosomal protein L31; n=9; Euteleostom... 68 9e-11
UniRef50_Q1X7K2 Cluster: Ribosomal protein L31; n=7; Trypanosoma... 62 6e-09
UniRef50_Q06740 Cluster: Putative uncharacterized protein; n=1; ... 60 2e-08
UniRef50_Q7QSE2 Cluster: GLP_426_16236_15916; n=1; Giardia lambl... 59 3e-08
UniRef50_UPI00005A550D Cluster: PREDICTED: similar to ribosomal ... 57 2e-07
UniRef50_P54009 Cluster: 50S ribosomal protein L31e; n=7; Euryar... 51 1e-05
UniRef50_Q98RR6 Cluster: 60S ribosomal protein L31; n=1; Guillar... 49 4e-05
UniRef50_Q74MC9 Cluster: NEQ364; n=1; Nanoarchaeum equitans|Rep:... 47 2e-04
UniRef50_UPI00015BAD97 Cluster: LSU ribosomal protein L31E; n=1;... 45 7e-04
UniRef50_Q8U3S7 Cluster: 50S ribosomal protein L31e; n=5; Thermo... 42 0.004
UniRef50_Q00ZX3 Cluster: 60S ribosomal protein L31a; n=1; Ostreo... 42 0.005
UniRef50_A0CQV2 Cluster: Chromosome undetermined scaffold_24, wh... 41 0.012
UniRef50_A0RW54 Cluster: Ribosomal protein L31E; n=2; Thermoprot... 40 0.016
UniRef50_Q8PYQ4 Cluster: 50S ribosomal protein L31e; n=11; Eurya... 40 0.016
UniRef50_O28213 Cluster: 50S ribosomal protein L31e; n=1; Archae... 40 0.016
UniRef50_Q9YD25 Cluster: 50S ribosomal protein L31e; n=1; Aeropy... 40 0.016
UniRef50_Q8ZTU2 Cluster: 50S ribosomal protein L31e; n=4; Pyroba... 38 0.063
UniRef50_A2X8Z3 Cluster: Putative uncharacterized protein; n=1; ... 38 0.083
UniRef50_Q8SSC8 Cluster: 60S ribosomal protein L31; n=1; Encepha... 35 0.58
UniRef50_A3DNH4 Cluster: 50S ribosomal protein L31e; n=2; Desulf... 34 1.0
UniRef50_A2EKX9 Cluster: Ribosomal protein L31e, putative; n=6; ... 33 2.4
UniRef50_Q02B40 Cluster: HAD-superfamily hydrolase, subfamily IA... 33 3.1
UniRef50_A7PUP2 Cluster: Chromosome chr7 scaffold_31, whole geno... 32 4.1
>UniRef50_Q9GP16 Cluster: 60S ribosomal protein L31; n=27;
Coelomata|Rep: 60S ribosomal protein L31 - Heliothis
virescens (Noctuid moth) (Owlet moth)
Length = 124
Score = 138 bits (335), Expect = 3e-32
Identities = 63/73 (86%), Positives = 68/73 (93%)
Frame = +1
Query: 37 KKRQISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 216
+K + + +VTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPD+RVDTRLNK
Sbjct: 8 RKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDVRVDTRLNK 67
Query: 217 FLWSKGVRNVPFR 255
FLWSKGVRNVPFR
Sbjct: 68 FLWSKGVRNVPFR 80
Score = 72.9 bits (171), Expect = 2e-12
Identities = 34/35 (97%), Positives = 34/35 (97%)
Frame = +3
Query: 282 NDDEDSAHKLFTLVTYVPVASIKGLQTENVDASHE 386
NDDEDSAHKLFTLVTYVPVASIKGLQTENVDAS E
Sbjct: 90 NDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE 124
Score = 37.5 bits (83), Expect = 0.11
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +2
Query: 17 MAKPKGERKGKSAINELL 70
MAKPKGERKGKSAINE++
Sbjct: 1 MAKPKGERKGKSAINEVV 18
>UniRef50_P62899 Cluster: 60S ribosomal protein L31; n=48;
Metazoa|Rep: 60S ribosomal protein L31 - Homo sapiens
(Human)
Length = 125
Score = 125 bits (302), Expect = 3e-28
Identities = 52/73 (71%), Positives = 66/73 (90%)
Frame = +1
Query: 37 KKRQISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 216
KK + + +VTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R+DTRLNK
Sbjct: 11 KKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNK 70
Query: 217 FLWSKGVRNVPFR 255
+W+KG+RNVP+R
Sbjct: 71 AVWAKGIRNVPYR 83
Score = 50.4 bits (115), Expect = 1e-05
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +3
Query: 282 NDDEDSAHKLFTLVTYVPVASIKGLQTENVD 374
N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 93 NEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>UniRef50_UPI00005A08CD Cluster: PREDICTED: similar to ribosomal
protein L31; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L31 - Canis familiaris
Length = 130
Score = 124 bits (298), Expect = 1e-27
Identities = 51/67 (76%), Positives = 63/67 (94%)
Frame = +1
Query: 55 HKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKG 234
H+R TREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R+DTRLNK +W+KG
Sbjct: 55 HQRGSTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKG 114
Query: 235 VRNVPFR 255
+RNVP+R
Sbjct: 115 IRNVPYR 121
>UniRef50_Q9V597 Cluster: 60S ribosomal protein L31; n=173;
Eukaryota|Rep: 60S ribosomal protein L31 - Drosophila
melanogaster (Fruit fly)
Length = 124
Score = 110 bits (264), Expect = 1e-23
Identities = 46/64 (71%), Positives = 58/64 (90%)
Frame = +1
Query: 64 IVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRN 243
+VTRE T++L KR+H +GFKKRAPRAIKEIRKFAE++MGT D+R+DTRLNK +WSKG+R+
Sbjct: 17 VVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVRIDTRLNKHIWSKGIRS 76
Query: 244 VPFR 255
PFR
Sbjct: 77 TPFR 80
Score = 54.0 bits (124), Expect = 1e-06
Identities = 23/35 (65%), Positives = 30/35 (85%)
Frame = +3
Query: 282 NDDEDSAHKLFTLVTYVPVASIKGLQTENVDASHE 386
NDDEDS +KL+T VTYVPV++ K LQTENV++S +
Sbjct: 90 NDDEDSPNKLYTYVTYVPVSTFKNLQTENVESSDD 124
>UniRef50_Q9GN74 Cluster: 60S ribosomal protein L31; n=20;
Coelomata|Rep: 60S ribosomal protein L31 - Aedes aegypti
(Yellowfever mosquito)
Length = 124
Score = 109 bits (263), Expect = 2e-23
Identities = 48/77 (62%), Positives = 63/77 (81%)
Frame = +1
Query: 25 TQR*KKRQISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDT 204
T+ KK + + +VTRE T+NL++RLH VG+KKRAPRA+K +RKFAEK+MGT D+R+DT
Sbjct: 4 TKTEKKAKSAINEVVTRECTINLNRRLHKVGYKKRAPRAVKIVRKFAEKEMGTNDVRIDT 63
Query: 205 RLNKFLWSKGVRNVPFR 255
RLNK LW +G+RN PFR
Sbjct: 64 RLNKALWHRGIRNPPFR 80
Score = 54.4 bits (125), Expect = 9e-07
Identities = 23/35 (65%), Positives = 31/35 (88%)
Frame = +3
Query: 282 NDDEDSAHKLFTLVTYVPVASIKGLQTENVDASHE 386
NDDEDS +KL+TLVTYVPV++ K LQTENV+++ +
Sbjct: 90 NDDEDSPNKLYTLVTYVPVSTFKELQTENVESTED 124
>UniRef50_P51420 Cluster: 60S ribosomal protein L31-3; n=12;
Eukaryota|Rep: 60S ribosomal protein L31-3 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 119
Score = 103 bits (247), Expect = 1e-21
Identities = 44/66 (66%), Positives = 55/66 (83%)
Frame = +1
Query: 58 KRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGV 237
+ ++TREYT+NLH+RLH FKK+AP+AIKEIRKFAEK MGT D+RVD +LNK +WSKG+
Sbjct: 9 EEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSKGI 68
Query: 238 RNVPFR 255
R P R
Sbjct: 69 RGPPRR 74
>UniRef50_Q4PI65 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 175
Score = 100 bits (239), Expect = 1e-20
Identities = 46/82 (56%), Positives = 61/82 (74%)
Frame = +1
Query: 10 DNNG*TQR*KKRQISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPD 189
D+ +Q+ KK + + +VTREYTVNLHKR+H V FKKRAPRAIKE+ FA+K MGT D
Sbjct: 51 DHKDKSQKGKKTRSALNDVVTREYTVNLHKRVHDVAFKKRAPRAIKEVVAFAQKAMGTKD 110
Query: 190 IRVDTRLNKFLWSKGVRNVPFR 255
+R+D +LN+ +W GV+N P R
Sbjct: 111 VRLDPKLNQEVWKYGVKNFPRR 132
>UniRef50_UPI0000D9FB71 Cluster: PREDICTED: similar to ribosomal
protein L31, partial; n=1; Macaca mulatta|Rep:
PREDICTED: similar to ribosomal protein L31, partial -
Macaca mulatta
Length = 129
Score = 89.4 bits (212), Expect = 3e-17
Identities = 42/77 (54%), Positives = 57/77 (74%)
Frame = +1
Query: 67 VTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNV 246
VTR YT N+ K + GVGFKKR P+A+KEI+KFA K+M T D+R+DTR NK +W+KG NV
Sbjct: 25 VTRGYTSNIQKHIRGVGFKKRGPQALKEIQKFAMKEMRTLDVRLDTRQNKAVWNKGTSNV 84
Query: 247 PFRSV*GFHEDVMMMKI 297
+ + GF E++M + I
Sbjct: 85 SWVPICGF-ENMMKLNI 100
Score = 31.9 bits (69), Expect = 5.4
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3
Query: 303 HKLFTLVTYVPVASIKGL 356
HKL+TL+TYVPV + K L
Sbjct: 101 HKLYTLITYVPVTTFKNL 118
>UniRef50_Q22DH9 Cluster: 60S ribosomal protein L31, putative; n=1;
Tetrahymena thermophila SB210|Rep: 60S ribosomal protein
L31, putative - Tetrahymena thermophila SB210
Length = 111
Score = 89.4 bits (212), Expect = 3e-17
Identities = 37/58 (63%), Positives = 47/58 (81%)
Frame = +1
Query: 82 TVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPFR 255
TVNLHK+ H + FKK+APRAI+EI A+K MGT D+R+DT LNKF+WS G+RN+P R
Sbjct: 12 TVNLHKQCHKISFKKKAPRAIREIVAIAKKTMGTDDVRIDTELNKFIWSNGIRNIPRR 69
>UniRef50_UPI0001505641 Cluster: 60S ribosomal protein L31 (RPL31C);
n=1; Arabidopsis thaliana|Rep: 60S ribosomal protein L31
(RPL31C) - Arabidopsis thaliana
Length = 85
Score = 80.6 bits (190), Expect = 1e-14
Identities = 34/48 (70%), Positives = 42/48 (87%)
Frame = +1
Query: 58 KRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVD 201
+ ++TREYT+NLH+RLH FKK+AP+AIKEIRKFAEK MGT D+RVD
Sbjct: 9 EEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVD 56
>UniRef50_Q7RSL1 Cluster: Ribosomal protein L31e, putative; n=7;
Apicomplexa|Rep: Ribosomal protein L31e, putative -
Plasmodium yoelii yoelii
Length = 142
Score = 80.6 bits (190), Expect = 1e-14
Identities = 37/72 (51%), Positives = 50/72 (69%)
Frame = +1
Query: 40 KRQISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKF 219
K+Q + T+ T+NL K H V +K++APRAIKEI+ A K M T D+R+D +LNKF
Sbjct: 29 KKQKKTLKPSTKVITINLSKLTHDVCYKRKAPRAIKEIKNIAGKLMHTKDVRLDVKLNKF 88
Query: 220 LWSKGVRNVPFR 255
+WSKG+RN P R
Sbjct: 89 IWSKGIRNPPKR 100
Score = 33.9 bits (74), Expect = 1.3
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +3
Query: 282 NDDEDSAHKLFTLVTYVPVASIKGLQTE 365
N+DEDS +++TLV +V V S KGL E
Sbjct: 110 NEDEDSKERMYTLVQHVMVDSYKGLVNE 137
>UniRef50_UPI00005A10F5 Cluster: PREDICTED: similar to ribosomal
protein L31; n=2; Eutheria|Rep: PREDICTED: similar to
ribosomal protein L31 - Canis familiaris
Length = 175
Score = 74.1 bits (174), Expect = 1e-12
Identities = 29/45 (64%), Positives = 40/45 (88%)
Frame = +1
Query: 121 KKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPFR 255
+K RA+K+IRKFA K++GTPD+R+DTRLNK +W+KG+RNVP+R
Sbjct: 89 RKERRRALKDIRKFAMKELGTPDVRIDTRLNKAVWAKGIRNVPYR 133
Score = 51.2 bits (117), Expect = 8e-06
Identities = 22/31 (70%), Positives = 27/31 (87%)
Frame = +3
Query: 282 NDDEDSAHKLFTLVTYVPVASIKGLQTENVD 374
N+DEDS +KL+TLVTYVPV ++K LQT NVD
Sbjct: 143 NEDEDSPNKLYTLVTYVPVTTLKNLQTVNVD 173
>UniRef50_UPI000049A444 Cluster: 60S ribosomal protein L31; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L31 - Entamoeba histolytica HM-1:IMSS
Length = 150
Score = 72.9 bits (171), Expect = 2e-12
Identities = 33/63 (52%), Positives = 46/63 (73%)
Frame = +1
Query: 67 VTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNV 246
+TRE T+++HK LH FKKRAP+AIK IR A K M T +++ D LN+F+WS+G+R+V
Sbjct: 46 ITREMTIHMHKYLHKESFKKRAPKAIKIIRFLAIKTMKTHNVKFDMGLNQFIWSQGIRSV 105
Query: 247 PFR 255
R
Sbjct: 106 ADR 108
Score = 35.5 bits (78), Expect = 0.44
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +3
Query: 291 EDSAHKLFTLVTYVPVASIKGLQTENVD 374
E K +TLV+YVPVAS KGL T+ V+
Sbjct: 119 EGEEGKFYTLVSYVPVASFKGLVTKTVE 146
>UniRef50_UPI0000DA1BEE Cluster: PREDICTED: similar to ribosomal
protein L31; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L31 - Rattus norvegicus
Length = 163
Score = 68.9 bits (161), Expect = 4e-11
Identities = 32/56 (57%), Positives = 40/56 (71%)
Frame = +1
Query: 37 KKRQISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDT 204
KK + +VTREYT+N+HKR+H VGFK AP A+KEI KFA K MGTP+ + T
Sbjct: 10 KKGHSAINEMVTREYTINIHKRIHEVGFKMHAPWALKEIWKFAIKAMGTPEFVICT 65
>UniRef50_Q6Y207 Cluster: Ribosomal protein L31; n=9;
Euteleostomi|Rep: Ribosomal protein L31 - Pagrus major
(Red sea bream) (Chrysophrys major)
Length = 91
Score = 67.7 bits (158), Expect = 9e-11
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = +1
Query: 139 AIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPFR 255
A IRKFA K+MGTPD+R+DTRLNK +WSKGVRNVP+R
Sbjct: 11 APSRIRKFAVKEMGTPDVRMDTRLNKAVWSKGVRNVPYR 49
Score = 52.4 bits (120), Expect = 4e-06
Identities = 23/31 (74%), Positives = 27/31 (87%)
Frame = +3
Query: 282 NDDEDSAHKLFTLVTYVPVASIKGLQTENVD 374
N+DEDS +KL+TLVTYVPV + KGLQT NVD
Sbjct: 59 NEDEDSPNKLYTLVTYVPVTTCKGLQTVNVD 89
>UniRef50_Q1X7K2 Cluster: Ribosomal protein L31; n=7;
Trypanosomatidae|Rep: Ribosomal protein L31 - Leishmania
major
Length = 188
Score = 61.7 bits (143), Expect = 6e-09
Identities = 30/63 (47%), Positives = 39/63 (61%)
Frame = +1
Query: 67 VTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNV 246
V+ E T++L K L F KRAP AIK I+ F + M T D R+D LN ++W KGV+ V
Sbjct: 84 VSMEATIHLSKLLKKKTFSKRAPLAIKRIKAFVGRLMKTKDNRIDASLNTYIWHKGVKGV 143
Query: 247 PFR 255
P R
Sbjct: 144 PGR 146
>UniRef50_Q06740 Cluster: Putative uncharacterized protein; n=1;
Saccharomyces cerevisiae|Rep: Putative uncharacterized
protein - Saccharomyces cerevisiae (Baker's yeast)
Length = 77
Score = 60.1 bits (139), Expect = 2e-08
Identities = 35/60 (58%), Positives = 38/60 (63%)
Frame = -1
Query: 245 TFLTPLDQRNLFKRVSTRMSGVPICFSANFRISLIALGARFLNPTP*SRLCKLTVYSRVT 66
T LT L Q F + R S VP+C ANF ISL ALGA FL TP + LCKL VYSRVT
Sbjct: 17 TPLTLLFQIAWFNSGARRTSSVPMCNLANFLISLTALGALFLKETPCNLLCKLMVYSRVT 76
>UniRef50_Q7QSE2 Cluster: GLP_426_16236_15916; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_426_16236_15916 - Giardia lamblia
ATCC 50803
Length = 106
Score = 59.3 bits (137), Expect = 3e-08
Identities = 27/63 (42%), Positives = 40/63 (63%)
Frame = +1
Query: 67 VTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNV 246
+ E+T+ L+K + G KK AP AI+ IR EK D+R+D +N F+WS+G+R+V
Sbjct: 3 IVYEHTIRLNKAVRGKPSKKAAPIAIRAIRAQVEKLAKVEDVRLDPSVNVFVWSRGIRHV 62
Query: 247 PFR 255
P R
Sbjct: 63 PRR 65
>UniRef50_UPI00005A550D Cluster: PREDICTED: similar to ribosomal
protein L31; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L31 - Canis familiaris
Length = 141
Score = 56.8 bits (131), Expect = 2e-07
Identities = 25/48 (52%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Frame = +1
Query: 115 GFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVR-NVPFR 255
GF++ P +KEIRKFA K+MGTPD+ +D NK + ++G+R NVP R
Sbjct: 49 GFREACPSGLKEIRKFAMKEMGTPDVHMDPGFNKAVQAEGIRNNVPHR 96
>UniRef50_P54009 Cluster: 50S ribosomal protein L31e; n=7;
Euryarchaeota|Rep: 50S ribosomal protein L31e -
Methanococcus jannaschii
Length = 87
Score = 50.8 bits (116), Expect = 1e-05
Identities = 22/61 (36%), Positives = 38/61 (62%)
Frame = +1
Query: 73 REYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPF 252
R YT+ L ++ KRAPRAIK+I++F ++ M +++D LN+ +W +G++ P
Sbjct: 9 RIYTIPLRDVINKSVRTKRAPRAIKKIKQFLKRHMKAEIVKIDNELNEKIWERGIQKPPA 68
Query: 253 R 255
R
Sbjct: 69 R 69
>UniRef50_Q98RR6 Cluster: 60S ribosomal protein L31; n=1; Guillardia
theta|Rep: 60S ribosomal protein L31 - Guillardia theta
(Cryptomonas phi)
Length = 97
Score = 48.8 bits (111), Expect = 4e-05
Identities = 25/54 (46%), Positives = 32/54 (59%)
Frame = +1
Query: 88 NLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVP 249
N+HKR+ G F KR AIKEI+KFA K +IR++ LN + S G N P
Sbjct: 15 NIHKRVFGKKFNKRVSIAIKEIKKFAWKLTKCNNIRIEPELNMQICSNGSSNPP 68
>UniRef50_Q74MC9 Cluster: NEQ364; n=1; Nanoarchaeum equitans|Rep:
NEQ364 - Nanoarchaeum equitans
Length = 79
Score = 46.8 bits (106), Expect = 2e-04
Identities = 20/58 (34%), Positives = 32/58 (55%)
Frame = +1
Query: 76 EYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVP 249
EYTVNL K + KR +A+K +++F + +++ LNKF+W +G R P
Sbjct: 2 EYTVNLRKAVLVTSRFKRTKKAVKALKEFVMRHTKAKIVKISQELNKFIWKRGGRKPP 59
>UniRef50_UPI00015BAD97 Cluster: LSU ribosomal protein L31E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L31E - Ignicoccus hospitalis KIN4/I
Length = 101
Score = 44.8 bits (101), Expect = 7e-04
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Frame = +1
Query: 79 YTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGT--PDIRVDTRLNKFLWSKGVRNVPF 252
YT+NL +RL+ RA RA++ +R+F + G D+++D +N +LWS + P
Sbjct: 10 YTINL-RRLYWGRRSNRAKRAVRMVREFVARHFGVEPEDVKIDNTVNNYLWSGSITKPPA 68
Query: 253 R 255
R
Sbjct: 69 R 69
>UniRef50_Q8U3S7 Cluster: 50S ribosomal protein L31e; n=5;
Thermococcaceae|Rep: 50S ribosomal protein L31e -
Pyrococcus furiosus
Length = 95
Score = 42.3 bits (95), Expect = 0.004
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = +1
Query: 79 YTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVP 249
+TV + K V KRAPRA+K +R+F + ++ +D ++N+ +W +G+ P
Sbjct: 11 FTVPIKKIKKIVPRWKRAPRAVKFVREFVARHAKAQEVIIDPKVNEKIWERGIEKPP 67
>UniRef50_Q00ZX3 Cluster: 60S ribosomal protein L31a; n=1;
Ostreococcus tauri|Rep: 60S ribosomal protein L31a -
Ostreococcus tauri
Length = 95
Score = 41.9 bits (94), Expect = 0.005
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +1
Query: 175 MGTPDIRVDTRLNKFLWSKGVRNVPF 252
M T D+R+D +LNK +WSKG+RNV F
Sbjct: 1 MKTSDVRIDVKLNKAVWSKGIRNVRF 26
>UniRef50_A0CQV2 Cluster: Chromosome undetermined scaffold_24, whole
genome shotgun sequence; n=9; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_24,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 372
Score = 40.7 bits (91), Expect = 0.012
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +1
Query: 121 KKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPFR 255
KKR + + A K M T D+R+D LN+ +W++G+RN+P R
Sbjct: 286 KKRPQKLSLILLISARKNMLTEDVRIDPSLNEAVWARGIRNLPRR 330
>UniRef50_A0RW54 Cluster: Ribosomal protein L31E; n=2;
Thermoprotei|Rep: Ribosomal protein L31E - Cenarchaeum
symbiosum
Length = 217
Score = 40.3 bits (90), Expect = 0.016
Identities = 21/59 (35%), Positives = 34/59 (57%)
Frame = +1
Query: 73 REYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVP 249
R YT+ L K L +RA RAI I++FA M +IR+D ++ +W +G+++ P
Sbjct: 7 RVYTIPLGKVLLSPD-NRRAMRAINMIKEFATHHMKNANIRIDEEVSHQIWLRGIKSPP 64
>UniRef50_Q8PYQ4 Cluster: 50S ribosomal protein L31e; n=11;
Euryarchaeota|Rep: 50S ribosomal protein L31e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 93
Score = 40.3 bits (90), Expect = 0.016
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +1
Query: 79 YTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGT--PDIRVDTRLNKFLWSKGVRNVP 249
YT+ L + + V KRA RA+KE+R F + M T +++D +N+ LW KG P
Sbjct: 15 YTIPL-REVRKVPAWKRAGRAVKEVRGFLVRHMKTEAEQVKLDKTINECLWEKGCEKPP 72
>UniRef50_O28213 Cluster: 50S ribosomal protein L31e; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L31e -
Archaeoglobus fulgidus
Length = 88
Score = 40.3 bits (90), Expect = 0.016
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +1
Query: 58 KRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTP--DIRVDTRLNKFLWSK 231
K +V R Y++ L ++ RA +A K +RKF + M ++++DT +N+ +W +
Sbjct: 3 KVVVERVYSIRLRHKMKRYPRWLRAKKAAKYVRKFLSRHMKVEPENVKIDTAVNEKIWER 62
Query: 232 GVRNVP 249
G P
Sbjct: 63 GAEKPP 68
>UniRef50_Q9YD25 Cluster: 50S ribosomal protein L31e; n=1; Aeropyrum
pernix|Rep: 50S ribosomal protein L31e - Aeropyrum
pernix
Length = 104
Score = 40.3 bits (90), Expect = 0.016
Identities = 18/59 (30%), Positives = 33/59 (55%)
Frame = +1
Query: 79 YTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPFR 255
Y VNL +R++ +RA RA++ +R+F + ++ +D LN ++WS+ P R
Sbjct: 9 YVVNL-RRVYWGRRTRRAIRAVRMVREFVRRHTKADEVVIDNELNNYIWSRSREKPPAR 66
>UniRef50_Q8ZTU2 Cluster: 50S ribosomal protein L31e; n=4;
Pyrobaculum|Rep: 50S ribosomal protein L31e -
Pyrobaculum aerophilum
Length = 91
Score = 38.3 bits (85), Expect = 0.063
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +1
Query: 58 KRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPD--IRVDTRLNKFLWSK 231
K +++REY +NL +R + V KRA A+ IR+F + + +++ LN LW++
Sbjct: 6 KVVLSREYVINL-RRAYEVSRTKRAKYAVGLIRRFVARHLKVEPKAVKIGQLLNTALWAR 64
Query: 232 GVRNVP 249
+ P
Sbjct: 65 SIEKPP 70
>UniRef50_A2X8Z3 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 93
Score = 37.9 bits (84), Expect = 0.083
Identities = 17/27 (62%), Positives = 21/27 (77%), Gaps = 2/27 (7%)
Frame = +1
Query: 37 KKRQISHKR--IVTREYTVNLHKRLHG 111
KKR ++ +VTREYT+NLHKRLHG
Sbjct: 4 KKRGAGTRKDEVVTREYTINLHKRLHG 30
>UniRef50_Q8SSC8 Cluster: 60S ribosomal protein L31; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L31
- Encephalitozoon cuniculi
Length = 111
Score = 35.1 bits (77), Expect = 0.58
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +1
Query: 70 TREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTP-DIRVDTRLNKFLWSKGVRNV 246
T E TVNL + + + K+A + ++ +++ +K + V LN FL+S+G++ +
Sbjct: 10 TVEMTVNLRRICSRLPWTKKASKVVRMLKREIQKHFREEIGVVVTNDLNNFLYSRGIKKI 69
Query: 247 P 249
P
Sbjct: 70 P 70
>UniRef50_A3DNH4 Cluster: 50S ribosomal protein L31e; n=2;
Desulfurococcales|Rep: 50S ribosomal protein L31e -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 102
Score = 34.3 bits (75), Expect = 1.0
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +1
Query: 49 ISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPD-IRVDTRLNKFLW 225
+S + +TR V KR++ RA RA++ IRK+ + + I +D +N+++W
Sbjct: 1 MSEEGKITRSIHVIPLKRVYWGRRTNRADRAVRLIRKYVRRHFKEAEKIIIDPAVNEYVW 60
Query: 226 SKGVRNVPFRSV 261
S+ P R +
Sbjct: 61 SRSREKPPRRVI 72
>UniRef50_A2EKX9 Cluster: Ribosomal protein L31e, putative; n=6;
Trichomonas vaginalis G3|Rep: Ribosomal protein L31e,
putative - Trichomonas vaginalis G3
Length = 133
Score = 33.1 bits (72), Expect = 2.4
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 288 DEDSAHKLFTLVTYVPVASIKGLQTENV 371
DE+ A K+ T+ +Y VAS GLQT+ V
Sbjct: 103 DEEDAEKMVTIASYKNVASFNGLQTQKV 130
>UniRef50_Q02B40 Cluster: HAD-superfamily hydrolase, subfamily IA,
variant 3; n=1; Solibacter usitatus Ellin6076|Rep:
HAD-superfamily hydrolase, subfamily IA, variant 3 -
Solibacter usitatus (strain Ellin6076)
Length = 202
Score = 32.7 bits (71), Expect = 3.1
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 79 YTV-NLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWS 228
YT + KRL G G +R + E R F E+ T D+RVD +WS
Sbjct: 31 YTAAEIPKRLAGTGLVERFETGLMEPRDFVEEMSRTLDLRVDYDQFSQIWS 81
>UniRef50_A7PUP2 Cluster: Chromosome chr7 scaffold_31, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr7 scaffold_31, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1011
Score = 32.3 bits (70), Expect = 4.1
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +1
Query: 46 QISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAE 168
+IS +R + TV KRL GVG +KR A+ E+R+FA+
Sbjct: 724 RISSERFSSIRPTVWRLKRLMGVGSEKRLKLAVGEVREFAK 764
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 380,184,421
Number of Sequences: 1657284
Number of extensions: 6679881
Number of successful extensions: 13824
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 13631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13823
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 19389441554
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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