Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10603
         (419 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82077-3|CAB63331.1|  122|Caenorhabditis elegans Hypothetical pr...   107   4e-24
Z82077-4|CAB63332.1|   70|Caenorhabditis elegans Hypothetical pr...    51   4e-07
Z96047-6|CAB09416.1|  922|Caenorhabditis elegans Hypothetical pr...    27   7.2  
Z29094-6|CAD45581.1|  457|Caenorhabditis elegans Hypothetical pr...    27   7.2  
Z29094-5|CAA82336.1|  465|Caenorhabditis elegans Hypothetical pr...    27   7.2  
AF024614-1|AAB97161.1|  922|Caenorhabditis elegans ADAM 10 protein.    27   7.2  
Z82260-1|CAB05140.1|  332|Caenorhabditis elegans Hypothetical pr...    26   9.5  
AC024860-2|AAN84888.1|  173|Caenorhabditis elegans Hypothetical ...    26   9.5  

>Z82077-3|CAB63331.1|  122|Caenorhabditis elegans Hypothetical
           protein W09C5.6a protein.
          Length = 122

 Score =  107 bits (256), Expect = 4e-24
 Identities = 45/73 (61%), Positives = 61/73 (83%)
 Frame = +1

Query: 37  KKRQISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 216
           KK + +   +VTREYT+++H R+ G+G KKRAPRAI EI+KFA+ QM T D+RVDT+LNK
Sbjct: 7   KKSRSTINEVVTREYTIHIHARIRGIGSKKRAPRAIDEIKKFAKIQMKTNDVRVDTKLNK 66

Query: 217 FLWSKGVRNVPFR 255
           F+WSKG++NVP+R
Sbjct: 67  FIWSKGIKNVPYR 79



 Score = 44.0 bits (99), Expect = 4e-05
 Identities = 19/32 (59%), Positives = 23/32 (71%)
 Frame = +3

Query: 282 NDDEDSAHKLFTLVTYVPVASIKGLQTENVDA 377
           N+DEDSA KL+TL TYVP  +  GL   NVD+
Sbjct: 89  NEDEDSAQKLYTLCTYVPCTNFHGLTNVNVDS 120


>Z82077-4|CAB63332.1|   70|Caenorhabditis elegans Hypothetical
           protein W09C5.6b protein.
          Length = 70

 Score = 50.8 bits (116), Expect = 4e-07
 Identities = 19/27 (70%), Positives = 25/27 (92%)
 Frame = +1

Query: 175 MGTPDIRVDTRLNKFLWSKGVRNVPFR 255
           M T D+RVDT+LNKF+WSKG++NVP+R
Sbjct: 1   MKTNDVRVDTKLNKFIWSKGIKNVPYR 27



 Score = 44.0 bits (99), Expect = 4e-05
 Identities = 19/32 (59%), Positives = 23/32 (71%)
 Frame = +3

Query: 282 NDDEDSAHKLFTLVTYVPVASIKGLQTENVDA 377
           N+DEDSA KL+TL TYVP  +  GL   NVD+
Sbjct: 37  NEDEDSAQKLYTLCTYVPCTNFHGLTNVNVDS 68


>Z96047-6|CAB09416.1|  922|Caenorhabditis elegans Hypothetical
           protein DY3.7 protein.
          Length = 922

 Score = 26.6 bits (56), Expect = 7.2
 Identities = 10/41 (24%), Positives = 22/41 (53%)
 Frame = +1

Query: 46  QISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAE 168
           +I+H++   +    NL +++ G GF  R  R + +++   E
Sbjct: 171 EINHRKWRVKRDAENLSEQMQGCGFSSRVRREMTDVQNSGE 211


>Z29094-6|CAD45581.1|  457|Caenorhabditis elegans Hypothetical
           protein C07A9.7b protein.
          Length = 457

 Score = 26.6 bits (56), Expect = 7.2
 Identities = 14/48 (29%), Positives = 18/48 (37%)
 Frame = +1

Query: 118 FKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPFRSV 261
           + +  PR  KE+          PD    T L    W K V N  FR +
Sbjct: 325 YTENIPRGSKELENLIIAFARRPDSETYTELIFQFWKKFVENAKFRGI 372


>Z29094-5|CAA82336.1|  465|Caenorhabditis elegans Hypothetical
           protein C07A9.7a protein.
          Length = 465

 Score = 26.6 bits (56), Expect = 7.2
 Identities = 14/48 (29%), Positives = 18/48 (37%)
 Frame = +1

Query: 118 FKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPFRSV 261
           + +  PR  KE+          PD    T L    W K V N  FR +
Sbjct: 325 YTENIPRGSKELENLIIAFARRPDSETYTELIFQFWKKFVENAKFRGI 372


>AF024614-1|AAB97161.1|  922|Caenorhabditis elegans ADAM 10 protein.
          Length = 922

 Score = 26.6 bits (56), Expect = 7.2
 Identities = 10/41 (24%), Positives = 22/41 (53%)
 Frame = +1

Query: 46  QISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAE 168
           +I+H++   +    NL +++ G GF  R  R + +++   E
Sbjct: 171 EINHRKWRVKRDAENLSEQMQGCGFSSRVRREMTDVQNSGE 211


>Z82260-1|CAB05140.1|  332|Caenorhabditis elegans Hypothetical
           protein C32H11.2 protein.
          Length = 332

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = -1

Query: 161 NFRISLIALGARFLNPTP*SRLCKLTVYSRVTIRLWLICLFF 36
           ++ IS +A+   F+   P +      +  R   R+W++CLFF
Sbjct: 121 HYLISFLAIRKCFVYFFPSTERTIFPILGRFYKRVWILCLFF 162


>AC024860-2|AAN84888.1|  173|Caenorhabditis elegans Hypothetical
           protein Y71H2AR.3 protein.
          Length = 173

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +1

Query: 106 HGVGFKKRAPRAIKEIRKFAEKQMGTPDIRV 198
           + V  K + P+ I++IRKF +  + +PD  V
Sbjct: 126 YNVDSKIKQPQVIEDIRKFVKIHVDSPDSEV 156


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,896,262
Number of Sequences: 27780
Number of extensions: 168117
Number of successful extensions: 375
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 375
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 682028672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)