Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10600
         (461 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    23   1.4  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    22   3.2  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   4.2  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   4.2  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   4.2  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   5.6  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    20   9.7  

>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 16/62 (25%), Positives = 25/62 (40%)
 Frame = -2

Query: 217 RRFTLPGGPFSRHLFPHRVV*CPSRVVRYDFLPRALPLAHRSQRPVPVEQLEYRHQLLEF 38
           R++ L     S+  F   V     R+   D +  A  +A   + P  V + EYR     F
Sbjct: 371 RKYYLGEKKLSKKTFRELVTMFSDRIFINDIVKTAKLMAKSMKSPTYVLKFEYRSMNSWF 430

Query: 37  QH 32
           +H
Sbjct: 431 EH 432


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 249 SSARSTPPPDED 214
           S  ++TPPP+ED
Sbjct: 32  SCLKTTPPPEED 43


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +3

Query: 174 NRWRENGPPGSVKRLRPVAEYYARSWRI*T 263
           N  R N  P  V     VA+Y AR W + T
Sbjct: 372 NSARSNKYPTRVPHRPYVAQYNARRWIVTT 401


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 15/62 (24%), Positives = 24/62 (38%)
 Frame = -2

Query: 217 RRFTLPGGPFSRHLFPHRVV*CPSRVVRYDFLPRALPLAHRSQRPVPVEQLEYRHQLLEF 38
           R++ L     S+  F   V     R+   D +  A  +A   + P    + EYR     F
Sbjct: 371 RKYYLGEKKLSKKTFRELVAMFSDRIFINDIVKTAKLMAKSMKSPTYALKFEYRSMNSWF 430

Query: 37  QH 32
           +H
Sbjct: 431 EH 432


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 15/62 (24%), Positives = 24/62 (38%)
 Frame = -2

Query: 217 RRFTLPGGPFSRHLFPHRVV*CPSRVVRYDFLPRALPLAHRSQRPVPVEQLEYRHQLLEF 38
           R++ L     S+  F   V     R+   D +  A  +A   + P    + EYR     F
Sbjct: 371 RKYYLGEKKLSKKTFRELVAMFSDRIFINDIVKTAKLMAKSMKSPTYALKFEYRSMNSWF 430

Query: 37  QH 32
           +H
Sbjct: 431 EH 432


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 15/62 (24%), Positives = 24/62 (38%)
 Frame = -2

Query: 217 RRFTLPGGPFSRHLFPHRVV*CPSRVVRYDFLPRALPLAHRSQRPVPVEQLEYRHQLLEF 38
           R++ L     S+  F   V     R+   D +  A  +A   + P    + EYR     F
Sbjct: 371 RKYYLGEKKLSKRTFRELVAMFSDRIFINDIVKTAKLMAKSMKSPTYALKFEYRSGNSWF 430

Query: 37  QH 32
           +H
Sbjct: 431 EH 432


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 15/62 (24%), Positives = 24/62 (38%)
 Frame = -2

Query: 217 RRFTLPGGPFSRHLFPHRVV*CPSRVVRYDFLPRALPLAHRSQRPVPVEQLEYRHQLLEF 38
           R++ L     S+  F   V     R+   D +  A  +A   + P    + EYR     F
Sbjct: 371 RKYYLGEKKLSKKTFRDLVAMFSDRIFINDIVKTAKLMAKSMKSPTYALKFEYRSGNSWF 430

Query: 37  QH 32
           +H
Sbjct: 431 EH 432


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,306
Number of Sequences: 336
Number of extensions: 1166
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10616413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)