Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10600
         (461 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC035727-1|AAH35727.1|  337|Homo sapiens Lix1 homolog (mouse)-li...   125   6e-29
BC036467-1|AAH36467.1|  282|Homo sapiens Lix1 homolog (mouse) pr...   111   9e-25
AK098400-1|BAC05298.1|  282|Homo sapiens protein ( Homo sapiens ...   111   9e-25
BC007239-1|AAH07239.1|  234|Homo sapiens zinc finger, BED-type c...    31   1.9  
AK223624-1|BAD97344.1|  234|Homo sapiens zinc finger, BED domain...    31   2.5  
AB029030-1|BAA83059.1| 1278|Homo sapiens KIAA1107 protein protein.     29   5.9  

>BC035727-1|AAH35727.1|  337|Homo sapiens Lix1 homolog (mouse)-like
           protein.
          Length = 337

 Score =  125 bits (302), Expect = 6e-29
 Identities = 61/85 (71%), Positives = 71/85 (83%)
 Frame = +2

Query: 2   FMLEANKGRTMLEFQELMTVFQLLHWNGSLRAMRERQCSRQEVVAHYSARALDDAMREQM 181
           FMLE+NKG++MLEFQELMTVFQLLHWNGSL+AMRERQCSRQEV+AHYS RALDD +R QM
Sbjct: 217 FMLESNKGKSMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEVLAHYSHRALDDDIRHQM 276

Query: 182 AREWATREREASSSGGGVLRAELAN 256
           A +W +RE+    S  G L  ELA+
Sbjct: 277 ALDWVSREQ----SVPGALSRELAS 297


>BC036467-1|AAH36467.1|  282|Homo sapiens Lix1 homolog (mouse)
           protein.
          Length = 282

 Score =  111 bits (268), Expect = 9e-25
 Identities = 54/109 (49%), Positives = 73/109 (66%)
 Frame = +2

Query: 2   FMLEANKGRTMLEFQELMTVFQLLHWNGSLRAMRERQCSRQEVVAHYSARALDDAMREQM 181
           +MLE+N G+TMLEFQELMT+FQLLHWNGSL+A+RE +CSRQEV+++YS  +LD+ MR  M
Sbjct: 147 YMLESNMGKTMLEFQELMTIFQLLHWNGSLKALRETKCSRQEVISYYSQYSLDEKMRSHM 206

Query: 182 AREWATREREASSSGGGVLRAELANLNASFGRRGWRRASFASLKKSATS 328
           A +W  +ER++       LR  L  L  +  R+  +   F   KK   S
Sbjct: 207 ALDWIMKERDSPGIVSQELRMALRQLEEA--RKAGQELRFYKEKKEILS 253


>AK098400-1|BAC05298.1|  282|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25534 fis, clone CBR08513. ).
          Length = 282

 Score =  111 bits (268), Expect = 9e-25
 Identities = 54/109 (49%), Positives = 73/109 (66%)
 Frame = +2

Query: 2   FMLEANKGRTMLEFQELMTVFQLLHWNGSLRAMRERQCSRQEVVAHYSARALDDAMREQM 181
           +MLE+N G+TMLEFQELMT+FQLLHWNGSL+A+RE +CSRQEV+++YS  +LD+ MR  M
Sbjct: 147 YMLESNMGKTMLEFQELMTIFQLLHWNGSLKALRETKCSRQEVISYYSQYSLDEKMRSHM 206

Query: 182 AREWATREREASSSGGGVLRAELANLNASFGRRGWRRASFASLKKSATS 328
           A +W  +ER++       LR  L  L  +  R+  +   F   KK   S
Sbjct: 207 ALDWIMKERDSPGIVSQELRMALRQLEEA--RKAGQELRFYKEKKEILS 253


>BC007239-1|AAH07239.1|  234|Homo sapiens zinc finger, BED-type
           containing 3 protein.
          Length = 234

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
 Frame = +2

Query: 101 RERQCSRQEVVAHYSARALDDAMR----EQMAREWATREREASSSGGGVLRAELANLNAS 268
           RER+  R+E+      RAL+   R    E+ A   A RE +A       L+A L +++  
Sbjct: 146 RERELERRELAVEQGERALERRRRALQEEERAAAQARRELQAERE---ALQARLRDVSRR 202

Query: 269 FGRRGWRRASFASLK 313
            G  GW  A+   LK
Sbjct: 203 EGALGWAPAAPPPLK 217


>AK223624-1|BAD97344.1|  234|Homo sapiens zinc finger, BED domain
           containing 3 variant protein.
          Length = 234

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
 Frame = +2

Query: 101 RERQCSRQEVVAHYSARALDDAMR----EQMAREWATREREASSSGGGVLRAELANLNAS 268
           RER+  R+E       RAL+   R    E+ A   A RE +A       L+A L +++  
Sbjct: 146 RERELERREAAVEQGERALERRRRALQEEERAAAQARRELQAERE---ALQARLRDVSRR 202

Query: 269 FGRRGWRRASFASLK 313
            G  GW  A+   LK
Sbjct: 203 EGALGWAPAAPPPLK 217


>AB029030-1|BAA83059.1| 1278|Homo sapiens KIAA1107 protein protein.
          Length = 1278

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +1

Query: 82  RVAESDARAAMLAAGSRSALLGSGTRRRDAGTDGAR 189
           +V E  A AA  A G ++ L G G R ++    GAR
Sbjct: 143 QVVERSATAAAAATGQKNLLNGKGVRNQEGQISGAR 178


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,268,808
Number of Sequences: 237096
Number of extensions: 800411
Number of successful extensions: 2472
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2472
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3929066862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)