Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10600
         (461 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY739659-1|AAU85298.1|  288|Apis mellifera hyperpolarization-act...    23   1.6  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    23   1.6  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    23   1.6  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   2.8  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   2.8  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   8.5  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   8.5  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    21   8.5  

>AY739659-1|AAU85298.1|  288|Apis mellifera
           hyperpolarization-activated ion channelvariant T
           protein.
          Length = 288

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 38  EFQELMTVFQLLHWNGSLRAMR 103
           +FQ+    FQ+LH   +LR +R
Sbjct: 188 QFQDFSESFQILHAGRALRILR 209


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 38  EFQELMTVFQLLHWNGSLRAMR 103
           +FQ+    FQ+LH   +LR +R
Sbjct: 188 QFQDFSESFQILHAGRALRILR 209


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 38  EFQELMTVFQLLHWNGSLRAMR 103
           +FQ+    FQ+LH   +LR +R
Sbjct: 188 QFQDFSESFQILHAGRALRILR 209


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 99  IALSDPFQWSSWNTVISSWNSSI 31
           I +S   QWSS +T+  +W   +
Sbjct: 488 IFMSSSLQWSSTHTLDVAWRRKV 510


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 99  IALSDPFQWSSWNTVISSWNSSI 31
           I +S   QWSS +T+  +W   +
Sbjct: 526 IFMSSSLQWSSTHTLDVAWRRKV 548


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
            protein.
          Length = 1010

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 379  VVEITVAAAALDGRPVG 329
            + E+   A +LDG+P+G
Sbjct: 958  ISEVIGGAISLDGKPLG 974


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 169 HRVV*CPSRVVRYDFLPRALPLA 101
           H+V  C   ++ Y+F P A  L+
Sbjct: 465 HKVEVCEKTIIPYEFDPGAFLLS 487


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 88  RPVPVEQLEYRHQLLEFQH 32
           +P+  EQ E  H+L+ FQ+
Sbjct: 329 KPISPEQEELIHRLVYFQN 347


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,150
Number of Sequences: 438
Number of extensions: 1589
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12312900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)