BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV10593X (420 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value X64707-1|CAA45963.1| 211|Homo sapiens BBC1 protein. 102 6e-22 BC106058-1|AAI06059.1| 211|Homo sapiens ribosomal protein L13 p... 102 6e-22 BC093063-1|AAH93063.1| 211|Homo sapiens RPL13 protein protein. 102 6e-22 BC063378-1|AAH63378.1| 211|Homo sapiens ribosomal protein L13 p... 102 6e-22 BC027463-1|AAH27463.1| 211|Homo sapiens ribosomal protein L13 p... 102 6e-22 BC020804-1|AAH20804.1| 211|Homo sapiens RPL13 protein protein. 102 6e-22 BC014167-1|AAH14167.1| 211|Homo sapiens ribosomal protein L13 p... 102 6e-22 BC013078-1|AAH13078.1| 211|Homo sapiens ribosomal protein L13 p... 102 6e-22 BC010994-1|AAH10994.1| 211|Homo sapiens ribosomal protein L13 p... 102 6e-22 BC007805-1|AAH07805.1| 211|Homo sapiens ribosomal protein L13 p... 102 6e-22 BC007563-1|AAH07563.1| 211|Homo sapiens ribosomal protein L13 p... 102 6e-22 BC007345-1|AAH07345.1| 211|Homo sapiens ribosomal protein L13 p... 102 6e-22 BC004954-1|AAH04954.1| 211|Homo sapiens RPL13 protein protein. 102 6e-22 AB062392-1|BAB93479.1| 211|Homo sapiens ribosomal protein L13 p... 102 6e-22 BC066320-1|AAH66320.1| 211|Homo sapiens ribosomal protein L13 p... 99 5e-21 AK131343-1|BAD18499.1| 133|Homo sapiens protein ( Homo sapiens ... 29 8.4 >X64707-1|CAA45963.1| 211|Homo sapiens BBC1 protein. Length = 211 Score = 102 bits (244), Expect = 6e-22 Identities = 46/76 (60%), Positives = 52/76 (68%) Frame = +3 Query: 30 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 209 N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65 Query: 210 YHTKVRAGRGFTLREL 257 YHTKVRAGRGF+L EL Sbjct: 66 YHTKVRAGRGFSLEEL 81 Score = 74.9 bits (176), Expect = 1e-13 Identities = 34/46 (73%), Positives = 41/46 (89%) Frame = +2 Query: 263 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPK 400 AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP+ Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQTNVQRLKEYRSKLILFPR 129 >BC106058-1|AAI06059.1| 211|Homo sapiens ribosomal protein L13 protein. Length = 211 Score = 102 bits (244), Expect = 6e-22 Identities = 46/76 (60%), Positives = 52/76 (68%) Frame = +3 Query: 30 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 209 N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65 Query: 210 YHTKVRAGRGFTLREL 257 YHTKVRAGRGF+L EL Sbjct: 66 YHTKVRAGRGFSLEEL 81 Score = 74.9 bits (176), Expect = 1e-13 Identities = 34/46 (73%), Positives = 41/46 (89%) Frame = +2 Query: 263 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPK 400 AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP+ Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPR 129 >BC093063-1|AAH93063.1| 211|Homo sapiens RPL13 protein protein. Length = 211 Score = 102 bits (244), Expect = 6e-22 Identities = 46/76 (60%), Positives = 52/76 (68%) Frame = +3 Query: 30 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 209 N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65 Query: 210 YHTKVRAGRGFTLREL 257 YHTKVRAGRGF+L EL Sbjct: 66 YHTKVRAGRGFSLEEL 81 Score = 74.9 bits (176), Expect = 1e-13 Identities = 34/46 (73%), Positives = 41/46 (89%) Frame = +2 Query: 263 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPK 400 AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP+ Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQTNVQRLKEYRSKLILFPR 129 >BC063378-1|AAH63378.1| 211|Homo sapiens ribosomal protein L13 protein. Length = 211 Score = 102 bits (244), Expect = 6e-22 Identities = 46/76 (60%), Positives = 52/76 (68%) Frame = +3 Query: 30 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 209 N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65 Query: 210 YHTKVRAGRGFTLREL 257 YHTKVRAGRGF+L EL Sbjct: 66 YHTKVRAGRGFSLEEL 81 Score = 74.9 bits (176), Expect = 1e-13 Identities = 34/46 (73%), Positives = 41/46 (89%) Frame = +2 Query: 263 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPK 400 AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP+ Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPR 129 >BC027463-1|AAH27463.1| 211|Homo sapiens ribosomal protein L13 protein. Length = 211 Score = 102 bits (244), Expect = 6e-22 Identities = 46/76 (60%), Positives = 52/76 (68%) Frame = +3 Query: 30 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 209 N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65 Query: 210 YHTKVRAGRGFTLREL 257 YHTKVRAGRGF+L EL Sbjct: 66 YHTKVRAGRGFSLEEL 81 Score = 74.9 bits (176), Expect = 1e-13 Identities = 34/46 (73%), Positives = 41/46 (89%) Frame = +2 Query: 263 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPK 400 AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP+ Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPR 129 >BC020804-1|AAH20804.1| 211|Homo sapiens RPL13 protein protein. Length = 211 Score = 102 bits (244), Expect = 6e-22 Identities = 46/76 (60%), Positives = 52/76 (68%) Frame = +3 Query: 30 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 209 N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65 Query: 210 YHTKVRAGRGFTLREL 257 YHTKVRAGRGF+L EL Sbjct: 66 YHTKVRAGRGFSLEEL 81 Score = 74.9 bits (176), Expect = 1e-13 Identities = 34/46 (73%), Positives = 41/46 (89%) Frame = +2 Query: 263 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPK 400 AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP+ Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPR 129 >BC014167-1|AAH14167.1| 211|Homo sapiens ribosomal protein L13 protein. Length = 211 Score = 102 bits (244), Expect = 6e-22 Identities = 46/76 (60%), Positives = 52/76 (68%) Frame = +3 Query: 30 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 209 N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65 Query: 210 YHTKVRAGRGFTLREL 257 YHTKVRAGRGF+L EL Sbjct: 66 YHTKVRAGRGFSLEEL 81 Score = 74.9 bits (176), Expect = 1e-13 Identities = 34/46 (73%), Positives = 41/46 (89%) Frame = +2 Query: 263 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPK 400 AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP+ Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPR 129 >BC013078-1|AAH13078.1| 211|Homo sapiens ribosomal protein L13 protein. Length = 211 Score = 102 bits (244), Expect = 6e-22 Identities = 46/76 (60%), Positives = 52/76 (68%) Frame = +3 Query: 30 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 209 N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65 Query: 210 YHTKVRAGRGFTLREL 257 YHTKVRAGRGF+L EL Sbjct: 66 YHTKVRAGRGFSLEEL 81 Score = 74.9 bits (176), Expect = 1e-13 Identities = 34/46 (73%), Positives = 41/46 (89%) Frame = +2 Query: 263 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPK 400 AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP+ Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPR 129 >BC010994-1|AAH10994.1| 211|Homo sapiens ribosomal protein L13 protein. Length = 211 Score = 102 bits (244), Expect = 6e-22 Identities = 46/76 (60%), Positives = 52/76 (68%) Frame = +3 Query: 30 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 209 N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65 Query: 210 YHTKVRAGRGFTLREL 257 YHTKVRAGRGF+L EL Sbjct: 66 YHTKVRAGRGFSLEEL 81 Score = 74.9 bits (176), Expect = 1e-13 Identities = 34/46 (73%), Positives = 41/46 (89%) Frame = +2 Query: 263 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPK 400 AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP+ Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPR 129 >BC007805-1|AAH07805.1| 211|Homo sapiens ribosomal protein L13 protein. Length = 211 Score = 102 bits (244), Expect = 6e-22 Identities = 46/76 (60%), Positives = 52/76 (68%) Frame = +3 Query: 30 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 209 N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65 Query: 210 YHTKVRAGRGFTLREL 257 YHTKVRAGRGF+L EL Sbjct: 66 YHTKVRAGRGFSLEEL 81 Score = 74.9 bits (176), Expect = 1e-13 Identities = 34/46 (73%), Positives = 41/46 (89%) Frame = +2 Query: 263 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPK 400 AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP+ Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPR 129 >BC007563-1|AAH07563.1| 211|Homo sapiens ribosomal protein L13 protein. Length = 211 Score = 102 bits (244), Expect = 6e-22 Identities = 46/76 (60%), Positives = 52/76 (68%) Frame = +3 Query: 30 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 209 N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65 Query: 210 YHTKVRAGRGFTLREL 257 YHTKVRAGRGF+L EL Sbjct: 66 YHTKVRAGRGFSLEEL 81 Score = 74.9 bits (176), Expect = 1e-13 Identities = 34/46 (73%), Positives = 41/46 (89%) Frame = +2 Query: 263 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPK 400 AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP+ Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPR 129 >BC007345-1|AAH07345.1| 211|Homo sapiens ribosomal protein L13 protein. Length = 211 Score = 102 bits (244), Expect = 6e-22 Identities = 46/76 (60%), Positives = 52/76 (68%) Frame = +3 Query: 30 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 209 N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65 Query: 210 YHTKVRAGRGFTLREL 257 YHTKVRAGRGF+L EL Sbjct: 66 YHTKVRAGRGFSLEEL 81 Score = 74.9 bits (176), Expect = 1e-13 Identities = 34/46 (73%), Positives = 41/46 (89%) Frame = +2 Query: 263 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPK 400 AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP+ Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPR 129 >BC004954-1|AAH04954.1| 211|Homo sapiens RPL13 protein protein. Length = 211 Score = 102 bits (244), Expect = 6e-22 Identities = 46/76 (60%), Positives = 52/76 (68%) Frame = +3 Query: 30 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 209 N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65 Query: 210 YHTKVRAGRGFTLREL 257 YHTKVRAGRGF+L EL Sbjct: 66 YHTKVRAGRGFSLEEL 81 Score = 74.9 bits (176), Expect = 1e-13 Identities = 34/46 (73%), Positives = 41/46 (89%) Frame = +2 Query: 263 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPK 400 AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP+ Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPR 129 >AB062392-1|BAB93479.1| 211|Homo sapiens ribosomal protein L13 protein. Length = 211 Score = 102 bits (244), Expect = 6e-22 Identities = 46/76 (60%), Positives = 52/76 (68%) Frame = +3 Query: 30 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 209 N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65 Query: 210 YHTKVRAGRGFTLREL 257 YHTKVRAGRGF+L EL Sbjct: 66 YHTKVRAGRGFSLEEL 81 Score = 74.9 bits (176), Expect = 1e-13 Identities = 34/46 (73%), Positives = 41/46 (89%) Frame = +2 Query: 263 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPK 400 AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP+ Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPR 129 >BC066320-1|AAH66320.1| 211|Homo sapiens ribosomal protein L13 protein. Length = 211 Score = 99.1 bits (236), Expect = 5e-21 Identities = 45/76 (59%), Positives = 51/76 (67%) Frame = +3 Query: 30 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 209 N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRC TVR Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCTTVR 65 Query: 210 YHTKVRAGRGFTLREL 257 YHTKVRAGRGF+L EL Sbjct: 66 YHTKVRAGRGFSLEEL 81 Score = 74.9 bits (176), Expect = 1e-13 Identities = 34/46 (73%), Positives = 41/46 (89%) Frame = +2 Query: 263 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPK 400 AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP+ Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPR 129 >AK131343-1|BAD18499.1| 133|Homo sapiens protein ( Homo sapiens cDNA FLJ16361 fis, clone THYMU2030462. ). Length = 133 Score = 28.7 bits (61), Expect = 8.4 Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 7/45 (15%) Frame = -3 Query: 283 KYWV-QSCGPNSRRVNP--LPA--RTLVW--YRTVGHRTIGRNGP 170 ++WV Q+ G N + P LPA RTL++ + VGH+T R+GP Sbjct: 74 QHWVCQASGDNHSNLLPFLLPAQDRTLIFPTFLMVGHKTHSRDGP 118 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 62,453,327 Number of Sequences: 237096 Number of extensions: 1175109 Number of successful extensions: 2177 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 2106 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2162 length of database: 76,859,062 effective HSP length: 83 effective length of database: 57,180,094 effective search space used: 3202085264 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -