Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10593X
(420 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 29 0.028
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 29 0.028
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 25 0.26
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 22 2.4
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 22 2.4
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 22 2.4
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 21 7.5
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 7.5
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 7.5
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 21 7.5
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 21 7.5
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 28.7 bits (61), Expect = 0.028
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -3
Query: 298 SNRSGKYWVQSCGPNSRRVNPLPARTLVWYRTVGHRTI 185
+N V CG NS +N PAR + R+V +TI
Sbjct: 294 ANEVATILVDDCGCNSTMLNENPARVMACMRSVDAKTI 331
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 28.7 bits (61), Expect = 0.028
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -3
Query: 298 SNRSGKYWVQSCGPNSRRVNPLPARTLVWYRTVGHRTI 185
+N V CG NS +N PAR + R+V +TI
Sbjct: 294 ANEVATILVDDCGCNSTMLNENPARVMACMRSVDAKTI 331
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 25.4 bits (53), Expect = 0.26
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -3
Query: 127 FCFLRYRRAGWLNQVLTNLCQSLWKC 50
FC+ R A W N V NL SL KC
Sbjct: 538 FCYFRRNAATWKNAVRHNL--SLHKC 561
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 22.2 bits (45), Expect = 2.4
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 235 EDSLFVN*GRRIEPSICPNDWNCCRS 312
ED++ V+ + E + P NCCRS
Sbjct: 378 EDTMSVDRMQHCELHMQPRKKNCCRS 403
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 22.2 bits (45), Expect = 2.4
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 235 EDSLFVN*GRRIEPSICPNDWNCCRS 312
ED++ V+ + E + P NCCRS
Sbjct: 378 EDTMSVDRMQHCELHMQPRKKNCCRS 403
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 22.2 bits (45), Expect = 2.4
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +2
Query: 152 SSTSCSWAVTSY 187
S + C+W +TSY
Sbjct: 66 SGSKCTWTITSY 77
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 20.6 bits (41), Expect = 7.5
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -2
Query: 128 ILLSAVSSSWLVKPSFNKSLPILVE 54
I+ + + L S NKSLPIL E
Sbjct: 12 IVCQGTTGNILRGESLNKSLPILHE 36
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 20.6 bits (41), Expect = 7.5
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -2
Query: 158 WSYGLSFLYSILLSAVSSSWL 96
WS L FL +L S+SW+
Sbjct: 292 WSGCLQFLVPMLQGFPSNSWV 312
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 20.6 bits (41), Expect = 7.5
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -2
Query: 158 WSYGLSFLYSILLSAVSSSWL 96
WS L FL +L S+SW+
Sbjct: 260 WSGCLQFLVPMLQGFPSNSWV 280
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 20.6 bits (41), Expect = 7.5
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -2
Query: 128 ILLSAVSSSWLVKPSFNKSLPILVE 54
I+ + + L S NKSLPIL E
Sbjct: 12 IVCQGTTGNILRGESLNKSLPILHE 36
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 20.6 bits (41), Expect = 7.5
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -2
Query: 128 ILLSAVSSSWLVKPSFNKSLPILVE 54
I+ + + L S NKSLPIL E
Sbjct: 12 IVCQGTTGNILRGESLNKSLPILHE 36
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,963
Number of Sequences: 438
Number of extensions: 2543
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10750329
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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