Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10586
(872 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 153 1e-37
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 152 3e-37
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 150 1e-36
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 73 3e-13
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 69 5e-12
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 67 2e-11
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 65 5e-11
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 63 3e-10
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 62 6e-10
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 61 8e-10
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 61 8e-10
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 61 1e-09
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 60 1e-09
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 60 2e-09
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 59 3e-09
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 59 3e-09
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 56 2e-08
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 56 3e-08
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 56 3e-08
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 56 3e-08
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 56 4e-08
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 56 4e-08
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 55 5e-08
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 55 5e-08
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 55 5e-08
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 55 7e-08
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 55 7e-08
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 54 1e-07
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 54 2e-07
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 54 2e-07
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 54 2e-07
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 53 2e-07
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 52 4e-07
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 52 4e-07
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 52 4e-07
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 52 4e-07
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 52 4e-07
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 52 5e-07
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 52 5e-07
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 52 5e-07
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 52 5e-07
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 52 5e-07
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 52 7e-07
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 52 7e-07
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 52 7e-07
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 51 9e-07
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 51 9e-07
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 51 9e-07
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 51 9e-07
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 51 1e-06
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 51 1e-06
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 50 2e-06
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 50 2e-06
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 50 2e-06
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 49 4e-06
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 49 4e-06
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 49 4e-06
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 49 5e-06
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 49 5e-06
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 48 6e-06
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 48 8e-06
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 48 8e-06
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 48 1e-05
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 48 1e-05
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 48 1e-05
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 48 1e-05
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 47 1e-05
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 47 1e-05
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 47 1e-05
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 47 1e-05
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 47 2e-05
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 47 2e-05
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 47 2e-05
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 47 2e-05
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 47 2e-05
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 47 2e-05
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 47 2e-05
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 47 2e-05
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 47 2e-05
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 47 2e-05
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 47 2e-05
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 46 3e-05
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 46 3e-05
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 46 3e-05
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 46 3e-05
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 46 3e-05
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 46 3e-05
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 46 3e-05
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 46 3e-05
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 46 4e-05
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 45 8e-05
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 45 8e-05
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 45 8e-05
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 44 1e-04
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 44 1e-04
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 44 1e-04
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 44 2e-04
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 44 2e-04
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 44 2e-04
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 44 2e-04
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 43 2e-04
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 43 2e-04
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 43 3e-04
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 42 4e-04
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 42 4e-04
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 42 4e-04
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 42 5e-04
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 42 5e-04
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 42 5e-04
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 42 5e-04
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 42 7e-04
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 42 7e-04
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 41 0.001
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 41 0.001
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 41 0.001
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 41 0.001
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 41 0.001
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 41 0.001
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 41 0.001
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 41 0.001
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 41 0.001
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 41 0.001
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 41 0.001
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 41 0.001
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 41 0.001
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 41 0.001
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 40 0.002
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 40 0.002
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 40 0.002
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 40 0.002
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 40 0.002
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 40 0.003
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 40 0.003
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 40 0.003
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 40 0.003
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 39 0.004
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 39 0.004
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 39 0.004
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 39 0.004
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 39 0.004
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 39 0.005
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 39 0.005
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 39 0.005
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 38 0.007
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 38 0.007
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 38 0.007
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 38 0.009
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 38 0.009
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 38 0.009
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 38 0.012
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 36 0.027
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 36 0.027
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 36 0.027
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 36 0.027
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 36 0.027
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 35 0.062
At1g15850.1 68414.m01902 transducin family protein / WD-40 repea... 35 0.062
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 35 0.062
At5g45760.2 68418.m05626 transducin family protein / WD-40 repea... 35 0.082
At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 35 0.082
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 35 0.082
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 35 0.082
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 35 0.082
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 35 0.082
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 34 0.11
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 34 0.11
At3g13300.2 68416.m01675 transducin family protein / WD-40 repea... 34 0.11
At3g13300.1 68416.m01674 transducin family protein / WD-40 repea... 34 0.11
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 34 0.11
At1g80710.1 68414.m09470 transducin family protein / WD-40 repea... 34 0.11
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 34 0.14
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 34 0.14
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 34 0.14
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 33 0.25
At4g21520.1 68417.m03110 transducin family protein / WD-40 repea... 33 0.25
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 33 0.25
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 33 0.25
At1g76260.1 68414.m08855 transducin family protein / WD-40 repea... 33 0.25
At1g20540.1 68414.m02559 transducin family protein / WD-40 repea... 33 0.25
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 33 0.33
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 33 0.33
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 33 0.33
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 32 0.44
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 32 0.44
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 32 0.44
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 32 0.44
At5g58760.1 68418.m07360 transducin family protein / WD-40 repea... 32 0.58
At4g34280.1 68417.m04873 transducin family protein / WD-40 repea... 32 0.58
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 32 0.58
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 32 0.58
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 32 0.58
At4g11270.1 68417.m01823 transducin family protein / WD-40 repea... 31 0.76
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 31 0.76
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 31 0.76
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 31 1.0
At3g59850.1 68416.m06679 polygalacturonase, putative / pectinase... 31 1.0
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 31 1.0
At1g45160.1 68414.m05177 protein kinase family protein contains ... 31 1.0
At1g17720.2 68414.m02194 serine/threonine protein phosphatase 2A... 31 1.0
At1g17720.1 68414.m02193 serine/threonine protein phosphatase 2A... 31 1.0
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 31 1.3
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 31 1.3
At2g26700.1 68415.m03203 protein kinase family protein contains ... 31 1.3
At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-rel... 31 1.3
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 31 1.3
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 31 1.3
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 31 1.3
At5g12920.1 68418.m01482 expressed protein contains 3 weak WD-40... 30 1.8
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 30 1.8
At2g25420.1 68415.m03045 transducin family protein / WD-40 repea... 30 1.8
At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4 ... 30 2.3
At4g34020.1 68417.m04827 DJ-1 family protein similar to CAP1 [Ra... 30 2.3
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 30 2.3
At2g46560.1 68415.m05808 transducin family protein / WD-40 repea... 30 2.3
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 29 3.1
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 29 3.1
At5g04560.1 68418.m00456 DEMETER protein (DME) identical to DEME... 29 3.1
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 29 3.1
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 29 3.1
At2g36350.1 68415.m04461 protein kinase, putative similar to pro... 29 3.1
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 29 3.1
At4g04570.1 68417.m00670 protein kinase family protein contains ... 29 4.1
At2g18810.1 68415.m02189 hypothetical protein contains Pfam prof... 29 4.1
At1g69400.2 68414.m07968 transducin family protein / WD-40 repea... 29 4.1
At1g69400.1 68414.m07969 transducin family protein / WD-40 repea... 29 4.1
At1g65030.1 68414.m07371 transducin family protein / WD-40 repea... 29 4.1
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 29 4.1
At5g14050.1 68418.m01644 transducin family protein / WD-40 repea... 29 5.4
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 29 5.4
At3g26480.1 68416.m03301 transducin family protein / WD-40 repea... 29 5.4
At3g22620.1 68416.m02856 protease inhibitor/seed storage/lipid t... 29 5.4
At3g13290.1 68416.m01673 transducin family protein / WD-40 repea... 29 5.4
At5g13850.1 68418.m01619 nascent polypeptide-associated complex ... 28 7.1
At3g12390.1 68416.m01544 nascent polypeptide associated complex ... 28 7.1
At1g27470.1 68414.m03349 transducin-related / WD-40 repeat prote... 28 7.1
At5g01290.1 68418.m00039 mRNA capping enzyme family protein simi... 28 9.4
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 28 9.4
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 28 9.4
At2g16490.1 68415.m01891 XH domain-containing protein contains P... 28 9.4
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 153 bits (371), Expect = 1e-37
Identities = 70/97 (72%), Positives = 76/97 (78%)
Frame = +3
Query: 222 KQLRYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVL 401
K + GHSHF+ DVVLSSDG +ALSGSWD LRLWDLA G+TTRRF HTKDVL
Sbjct: 50 KSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVL 109
Query: 402 SVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDED 512
SVAFS DNRQIVS SRD+TIKLWNTL ECKYTI + D
Sbjct: 110 SVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEGD 146
Score = 136 bits (329), Expect = 2e-32
Identities = 59/85 (69%), Positives = 69/85 (81%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GH +WVSCVRFSPN P IVS WD+TVKVW+L NCKL+ + +GHSGYLNTV VSPDGS
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGS 206
Query: 689 LCASGGKDMKAMLWDLNDGKHLHTL 763
LCASGGKD +LWDL +GK L++L
Sbjct: 207 LCASGGKDGVILLWDLAEGKKLYSL 231
Score = 66.1 bits (154), Expect = 3e-11
Identities = 29/59 (49%), Positives = 44/59 (74%)
Frame = +1
Query: 76 MSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRL 252
M+E L L+G +R H VT IAT D+I+++SRDK++I+WKLT+D+ +YG+ Q+RL
Sbjct: 1 MAEGLVLKGIMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRL 59
Score = 55.2 bits (127), Expect = 5e-08
Identities = 24/37 (64%), Positives = 28/37 (75%)
Frame = +1
Query: 760 LDHNDIITALCFSTNRYWLCAAFGPSIKIWDLESKEM 870
L+ II +LCFS NRYWLCAA SI+IWDLESK +
Sbjct: 231 LEAGSIIHSLCFSPNRYWLCAATENSIRIWDLESKSV 267
Score = 48.8 bits (111), Expect = 5e-06
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Frame = +3
Query: 225 QLRYTSKAFIGHSHFISDVVLSSDGNYA--LSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 398
+ +YT GH ++S V S + +S SWDKT+++W+L K H+ +
Sbjct: 137 ECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYL 196
Query: 399 LSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 491
+VA S D SG +D I LW+ LAE K
Sbjct: 197 NTVAVSPDGSLCASGGKDGVILLWD-LAEGK 226
Score = 42.3 bits (95), Expect = 4e-04
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHL-----GHSGYLNTVTVS 676
H+D V+ + +P + IIV+ D+++ +W LT GHS ++ V +S
Sbjct: 14 HTDIVTAIA-TPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLS 72
Query: 677 PDGSLCASGGKDMKAMLWDLNDGK 748
DG SG D + LWDL G+
Sbjct: 73 SDGQFALSGSWDGELRLWDLATGE 96
Score = 35.1 bits (77), Expect = 0.062
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Frame = +3
Query: 258 HSHFISDVVLSSDGN-YALSGSWDKTLRLW-----DLAAGKTTRRFEDHTKDVLSVAFSV 419
H+ ++ + D + ++ S DK++ LW D + G RR H+ V V S
Sbjct: 14 HTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSS 73
Query: 420 DNRQIVSGSRDKTIKLWN 473
D + +SGS D ++LW+
Sbjct: 74 DGQFALSGSWDGELRLWD 91
Score = 35.1 bits (77), Expect = 0.062
Identities = 20/75 (26%), Positives = 33/75 (44%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GHS +V V S + +S WD +++W L + +GH+ + +V S D
Sbjct: 61 GHSHFVEDVVLSSD--GQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNR 118
Query: 689 LCASGGKDMKAMLWD 733
S +D LW+
Sbjct: 119 QIVSASRDRTIKLWN 133
Score = 34.7 bits (76), Expect = 0.082
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +1
Query: 82 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI 237
+ KLR +L GH+G++ +A +P + S +D +++W L + Y +
Sbjct: 181 QNCKLRNSLVGHSGYLNTVAVSPD-GSLCASGGKDGVILLWDLAEGKKLYSL 231
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +3
Query: 384 HTKDVLSVAFSVDNRQI-VSGSRDKTIKLWNTLAECK 491
HT V ++A +DN I V+ SRDK+I LW + K
Sbjct: 14 HTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDK 50
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +1
Query: 112 GHNGWVTQIATNPK-YPDMILSSSRDKTLIVWKL 210
GH WV+ + +P I+S+S DKT+ VW L
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL 180
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 152 bits (368), Expect = 3e-37
Identities = 69/97 (71%), Positives = 76/97 (78%)
Frame = +3
Query: 222 KQLRYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVL 401
K + GHSHF+ DVVLSSDG +ALSGSWD LRLWDLA G++TRRF HTKDVL
Sbjct: 50 KSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVL 109
Query: 402 SVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDED 512
SVAFS DNRQIVS SRD+TIKLWNTL ECKYTI + D
Sbjct: 110 SVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEAD 146
Score = 135 bits (326), Expect = 4e-32
Identities = 59/85 (69%), Positives = 67/85 (78%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GH +WVSCVRFSPN P IVS WD+TVKVW+L NCKL+ GHSGYLNTV VSPDGS
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGS 206
Query: 689 LCASGGKDMKAMLWDLNDGKHLHTL 763
LCASGGKD +LWDL +GK L++L
Sbjct: 207 LCASGGKDGVILLWDLAEGKKLYSL 231
Score = 65.3 bits (152), Expect = 5e-11
Identities = 28/59 (47%), Positives = 44/59 (74%)
Frame = +1
Query: 76 MSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRL 252
M+E L L+GT+ H VT IAT D+I++SSRDK++I+WKLT+++ +YG+ Q+R+
Sbjct: 1 MAEGLVLKGTMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRM 59
Score = 55.2 bits (127), Expect = 5e-08
Identities = 24/37 (64%), Positives = 28/37 (75%)
Frame = +1
Query: 760 LDHNDIITALCFSTNRYWLCAAFGPSIKIWDLESKEM 870
L+ II +LCFS NRYWLCAA SI+IWDLESK +
Sbjct: 231 LEAGSIIHSLCFSPNRYWLCAATENSIRIWDLESKSV 267
Score = 49.6 bits (113), Expect = 3e-06
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Frame = +3
Query: 225 QLRYTSKAFIGHSHFISDVVLSSDGNYA--LSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 398
+ +YT GH ++S V S + +S SWDKT+++W+L K H+ +
Sbjct: 137 ECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYL 196
Query: 399 LSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 491
+VA S D SG +D I LW+ LAE K
Sbjct: 197 NTVAVSPDGSLCASGGKDGVILLWD-LAEGK 226
Score = 42.7 bits (96), Expect = 3e-04
Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 5/120 (4%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKIN-----HLGHSGYLNTVTVS 676
H+D V+ + +P + +IV+ D+++ +W LT GHS ++ V +S
Sbjct: 14 HTDMVTAIA-TPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLS 72
Query: 677 PDGSLCASGGKDMKAMLWDLNDGKHLHTLTTMISSLPCASQPTDTGYVLLSDLPSRSGIW 856
DG SG D + LWDL G+ + + TD ++ + +W
Sbjct: 73 SDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLW 132
Score = 37.1 bits (82), Expect = 0.015
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +1
Query: 82 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI 237
+ KLR TL GH+G++ +A +P + S +D +++W L + Y +
Sbjct: 181 QNCKLRNTLAGHSGYLNTVAVSPD-GSLCASGGKDGVILLWDLAEGKKLYSL 231
Score = 35.5 bits (78), Expect = 0.047
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Frame = +3
Query: 258 HSHFISDVVLSSDGNYAL-SGSWDKTLRLW-----DLAAGKTTRRFEDHTKDVLSVAFSV 419
H+ ++ + D + + + S DK++ LW D + G RR H+ V V S
Sbjct: 14 HTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSS 73
Query: 420 DNRQIVSGSRDKTIKLWN 473
D + +SGS D ++LW+
Sbjct: 74 DGQFALSGSWDGELRLWD 91
Score = 34.7 bits (76), Expect = 0.082
Identities = 20/75 (26%), Positives = 33/75 (44%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GHS +V V S + +S WD +++W L + +GH+ + +V S D
Sbjct: 61 GHSHFVQDVVLSSD--GQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNR 118
Query: 689 LCASGGKDMKAMLWD 733
S +D LW+
Sbjct: 119 QIVSASRDRTIKLWN 133
Score = 32.7 bits (71), Expect = 0.33
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +3
Query: 384 HTKDVLSVAFSVDNRQ-IVSGSRDKTIKLWNTLAECK 491
HT V ++A VDN IV+ SRDK+I LW E K
Sbjct: 14 HTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDK 50
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +1
Query: 112 GHNGWVTQIATNPK-YPDMILSSSRDKTLIVWKL 210
GH WV+ + +P I+S+S DKT+ VW L
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL 180
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 150 bits (364), Expect = 1e-36
Identities = 68/84 (80%), Positives = 74/84 (88%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
GHSHF+ DVVLSSDG +ALSGSWD LRLWDLAAG +TRRF HTKDVLSVAFS+DNRQI
Sbjct: 61 GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQI 120
Query: 435 VSGSRDKTIKLWNTLAECKYTIQD 506
VS SRD+TIKLWNTL ECKYTI +
Sbjct: 121 VSASRDRTIKLWNTLGECKYTISE 144
Score = 134 bits (325), Expect = 6e-32
Identities = 57/85 (67%), Positives = 68/85 (80%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GH DWVSCVRFSPN P IVS WD+TVKVW+L+NCKL+ GH+GY++TV VSPDGS
Sbjct: 148 GHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGS 207
Query: 689 LCASGGKDMKAMLWDLNDGKHLHTL 763
LCASGGKD +LWDL +GK L++L
Sbjct: 208 LCASGGKDGVVLLWDLAEGKKLYSL 232
Score = 69.3 bits (162), Expect = 3e-12
Identities = 31/59 (52%), Positives = 44/59 (74%)
Frame = +1
Query: 76 MSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRL 252
M+E L L+GT+R H VT IAT D+I+S+SRDK++I+WKLT+D+ YG+ Q+RL
Sbjct: 1 MAEGLVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRL 59
Score = 58.0 bits (134), Expect = 8e-09
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = +1
Query: 760 LDHNDIITALCFSTNRYWLCAAFGPSIKIWDLESKEM 870
L+ N +I ALCFS NRYWLCAA IKIWDLESK +
Sbjct: 232 LEANSVIHALCFSPNRYWLCAATEHGIKIWDLESKSI 268
Score = 54.0 bits (124), Expect = 1e-07
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Frame = +3
Query: 237 TSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWD-LAAGKTT--RRFEDHTKDVLSV 407
+++ F+GH+ + V S D +S S D+T++LW+ L K T E H V V
Sbjct: 97 STRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCV 156
Query: 408 AFSVDNRQ--IVSGSRDKTIKLWNTLAECK 491
FS + Q IVS S DKT+K+WN L+ CK
Sbjct: 157 RFSPNTLQPTIVSASWDKTVKVWN-LSNCK 185
Score = 50.4 bits (115), Expect = 2e-06
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Frame = +3
Query: 225 QLRYT-SKAFIGHSHFISDVVLSSDGNYA--LSGSWDKTLRLWDLAAGKTTRRFEDHTKD 395
+ +YT S+ GH ++S V S + +S SWDKT+++W+L+ K HT
Sbjct: 137 ECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGY 196
Query: 396 VLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 491
V +VA S D SG +D + LW+ LAE K
Sbjct: 197 VSTVAVSPDGSLCASGGKDGVVLLWD-LAEGK 227
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCK-----LKINHLGHSGYLNTVTVS 676
H+D V+ + ++A+ IIVS D+++ +W LT + GHS ++ V +S
Sbjct: 14 HTDMVTAIATPIDNAD-IIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLS 72
Query: 677 PDGSLCASGGKDMKAMLWDLNDG 745
DG SG D + LWDL G
Sbjct: 73 SDGQFALSGSWDGELRLWDLAAG 95
Score = 38.3 bits (85), Expect = 0.007
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Frame = +3
Query: 258 HSHFISDVVLSSDG-NYALSGSWDKTLRLW-----DLAAGKTTRRFEDHTKDVLSVAFSV 419
H+ ++ + D + +S S DK++ LW D A G RR H+ V V S
Sbjct: 14 HTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSS 73
Query: 420 DNRQIVSGSRDKTIKLWNTLA 482
D + +SGS D ++LW+ A
Sbjct: 74 DGQFALSGSWDGELRLWDLAA 94
Score = 37.5 bits (83), Expect = 0.012
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +1
Query: 91 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI 237
KLR TL GH G+V+ +A +P + S +D +++W L + Y +
Sbjct: 185 KLRSTLAGHTGYVSTVAVSPD-GSLCASGGKDGVVLLWDLAEGKKLYSL 232
Score = 32.3 bits (70), Expect = 0.44
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +3
Query: 384 HTKDVLSVAFSVDNRQI-VSGSRDKTIKLWNTLAECK 491
HT V ++A +DN I VS SRDK+I LW + K
Sbjct: 14 HTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDK 50
Score = 31.9 bits (69), Expect = 0.58
Identities = 20/75 (26%), Positives = 32/75 (42%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GHS +V V S + +S WD +++W L +GH+ + +V S D
Sbjct: 61 GHSHFVEDVVLSSD--GQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNR 118
Query: 689 LCASGGKDMKAMLWD 733
S +D LW+
Sbjct: 119 QIVSASRDRTIKLWN 133
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +1
Query: 37 RFRESSLFKPFSKMSETLKLRGTLRGHNGWVTQIATNPK-YPDMILSSSRDKTLIVWKLT 213
R R L+ + T+ G GH WV+ + +P I+S+S DKT+ VW L+
Sbjct: 125 RDRTIKLWNTLGECKYTISEGG--EGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLS 182
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 72.5 bits (170), Expect = 3e-13
Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Frame = +3
Query: 249 FIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 428
F GH + ISDV SSD + +S S DKTL+LWD+ G + HT V F+ +
Sbjct: 67 FTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSN 126
Query: 429 QIVSGSRDKTIKLWN-TLAEC 488
IVSGS D+T+++W+ T +C
Sbjct: 127 MIVSGSFDETVRIWDVTTGKC 147
Score = 62.9 bits (146), Expect = 3e-10
Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 422
K IGH+++ V + N +SGS+D+T+R+WD+ GK + H+ V +V F+ D
Sbjct: 107 KTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRD 166
Query: 423 NRQIVSGSRDKTIKLWNT-LAECKYTIQDED 512
IVS S D ++W++ C T+ D++
Sbjct: 167 GSLIVSSSYDGLCRIWDSGTGHCVKTLIDDE 197
Score = 57.6 bits (133), Expect = 1e-08
Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Frame = +3
Query: 240 SKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAA-----GKTTRRFEDHTKDVLS 404
S+ H+ +S V SSDG S S DKT+R + + + + F H +
Sbjct: 17 SQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISD 76
Query: 405 VAFSVDNRQIVSGSRDKTIKLWN 473
VAFS D R IVS S DKT+KLW+
Sbjct: 77 VAFSSDARFIVSASDDKTLKLWD 99
Score = 56.0 bits (129), Expect = 3e-08
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Frame = +3
Query: 243 KAFIGH---SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 413
K + GH + IS ++G +SGS D + +W+L + K ++ E HT+ V++VA
Sbjct: 234 KTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVAC 293
Query: 414 SVDNRQIVSGSRDKTIKLWNTLAE 485
I SGS DKT+++W E
Sbjct: 294 HPTENLIASGSLDKTVRIWTQKKE 317
Score = 54.0 bits (124), Expect = 1e-07
Identities = 32/116 (27%), Positives = 49/116 (42%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GH + +S V FS + IVS D+T+K+W + L +GH+ Y V +P +
Sbjct: 69 GHENGISDVAFSSDAR--FIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSN 126
Query: 689 LCASGGKDMKAMLWDLNDGKHLHTLTTMISSLPCASQPTDTGYVLLSDLPSRSGIW 856
+ SG D +WD+ GK L L + D ++ S IW
Sbjct: 127 MIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIW 182
Score = 52.8 bits (121), Expect = 3e-07
Identities = 29/85 (34%), Positives = 43/85 (50%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GH+++ CV F+P + +IVS +D TV++W +T K HS + V + DGS
Sbjct: 111 GHTNYAFCVNFNPQ--SNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGS 168
Query: 689 LCASGGKDMKAMLWDLNDGKHLHTL 763
L S D +WD G + TL
Sbjct: 169 LIVSSSYDGLCRIWDSGTGHCVKTL 193
Score = 52.8 bits (121), Expect = 3e-07
Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Frame = +3
Query: 270 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH--TKDVLSVAFSVDN-RQIVS 440
+S V S +G + L G+ D TLRLW++++ K + + H + +S AFSV N ++IVS
Sbjct: 201 VSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVS 260
Query: 441 GSRDKTIKLW 470
GS D + +W
Sbjct: 261 GSEDNCVHMW 270
Score = 39.1 bits (87), Expect = 0.004
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGS 688
HSD V+ V F N +IVS +D ++W T +K + ++ V SP+G
Sbjct: 154 HSDPVTAVDF--NRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGK 211
Query: 689 LCASGGKDMKAMLWDLNDGKHLHTLTTMISSLPCAS 796
G D LW+++ K L T T +++ C S
Sbjct: 212 FILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCIS 247
Score = 34.3 bits (75), Expect = 0.11
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHAN-PIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDG 685
GH + C+ + + N IVS D V +W L + KL GH+ + V P
Sbjct: 238 GHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTE 297
Query: 686 SLCASGGKDMKAMLW 730
+L ASG D +W
Sbjct: 298 NLIASGSLDKTVRIW 312
Score = 31.5 bits (68), Expect = 0.76
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +1
Query: 82 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT 213
ET L TL GH + + NP+ +MI+S S D+T+ +W +T
Sbjct: 101 ETGSLIKTLIGHTNYAFCVNFNPQ-SNMIVSGSFDETVRIWDVT 143
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 68.5 bits (160), Expect = 5e-12
Identities = 29/76 (38%), Positives = 45/76 (59%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 422
K GH ++ V S DG + S S+DK++RLW+ G+ F H V V++S D
Sbjct: 354 KRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSAD 413
Query: 423 NRQIVSGSRDKTIKLW 470
+R ++SGS+D T+K+W
Sbjct: 414 SRLLLSGSKDSTLKIW 429
Score = 60.5 bits (140), Expect = 1e-09
Identities = 27/74 (36%), Positives = 42/74 (56%)
Frame = +3
Query: 249 FIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 428
F GH + V S+D LSGS D TL++W++ K + H +V +V +S D
Sbjct: 398 FRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGE 457
Query: 429 QIVSGSRDKTIKLW 470
++VSG +D+ +KLW
Sbjct: 458 KVVSGGKDRVLKLW 471
Score = 59.7 bits (138), Expect = 3e-09
Identities = 33/93 (35%), Positives = 48/93 (51%)
Frame = +3
Query: 195 HRVEADQRRKQLRYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR 374
++ +A R + + S+ GH+ + V S DG SGS D T+RLWDL
Sbjct: 87 YQQQAVFRIRPVNRCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFT 146
Query: 375 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
+ H VL+VA+S D + +VSGS+ I WN
Sbjct: 147 CKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWN 179
Score = 48.0 bits (109), Expect = 8e-06
Identities = 27/80 (33%), Positives = 38/80 (47%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GH++ V CV FSP+ + S D TV++W L GH ++ TV SPDG
Sbjct: 107 GHAEAVLCVSFSPDGKQ--LASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGK 164
Query: 689 LCASGGKDMKAMLWDLNDGK 748
SG K + W+ G+
Sbjct: 165 HLVSGSKSGEICCWNPKKGE 184
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/56 (39%), Positives = 31/56 (55%)
Frame = +2
Query: 563 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 730
+++S D T+K+W + KLK + GH+ + V SPDG SGGKD LW
Sbjct: 416 LLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/80 (31%), Positives = 39/80 (48%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GH V+ V FSP+ I S +D++V++W+ + GH G + V+ S D
Sbjct: 358 GHQQLVNHVYFSPD--GKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSR 415
Query: 689 LCASGGKDMKAMLWDLNDGK 748
L SG KD +W++ K
Sbjct: 416 LLLSGSKDSTLKIWEIRTKK 435
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +3
Query: 309 LSGSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
+SGS D T+ LW+ + K + R H + V V FS D + I S S DK+++LWN
Sbjct: 333 VSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWN 388
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +3
Query: 384 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 485
H + VL V+FS D +Q+ SGS D T++LW+ E
Sbjct: 108 HAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTE 141
Score = 38.3 bits (85), Expect = 0.007
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Frame = +2
Query: 500 PR*GHSDWVSCVRFSPNH-ANPI--IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVT 670
P GH W++ + + P H ++P V+ D ++W +T K I GH+ + V
Sbjct: 189 PLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVK 248
Query: 671 VSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 763
DG + +G +D +W+ GK + L
Sbjct: 249 WGGDG-IIYTGSQDCTIKMWETTQGKLIREL 278
Score = 38.3 bits (85), Expect = 0.007
Identities = 24/66 (36%), Positives = 33/66 (50%)
Frame = +3
Query: 279 VVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 458
V LSS ++ S D R+WD+ K+ HT V V + D I +GS+D T
Sbjct: 205 VHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGGDGI-IYTGSQDCT 263
Query: 459 IKLWNT 476
IK+W T
Sbjct: 264 IKMWET 269
Score = 37.1 bits (82), Expect = 0.015
Identities = 28/101 (27%), Positives = 41/101 (40%), Gaps = 1/101 (0%)
Frame = +2
Query: 566 IVSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 742
+VS D T+ +W + K L GH +N V SPDG AS D LW+
Sbjct: 332 LVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGIT 391
Query: 743 GKHLHTLTTMISSLPCASQPTDTGYVLLSDLPSRSGIWKAR 865
G+ + + + S D+ +L S IW+ R
Sbjct: 392 GQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIR 432
Score = 33.5 bits (73), Expect = 0.19
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPD 682
GH+ V+CV++ + II + D T+K+W T KL GH ++N++ +S +
Sbjct: 239 GHTLAVTCVKWG---GDGIIYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLALSTE 293
Score = 32.7 bits (71), Expect = 0.33
Identities = 23/98 (23%), Positives = 44/98 (44%), Gaps = 7/98 (7%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTT-RRFEDHTKDVLSVAF-----S 416
GH +++ V S DG + +SGS + W+ G+ H K + +++ S
Sbjct: 149 GHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLS 208
Query: 417 VDNRQIVSGSRDKTIKLWN-TLAECKYTIQDEDTAIGC 527
R+ V+ S+D ++W+ TL + + A+ C
Sbjct: 209 SPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTC 246
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +1
Query: 109 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIP 240
RGH G V Q++ + ++LS S+D TL +W++ + +P
Sbjct: 399 RGHVGPVYQVSWSAD-SRLLLSGSKDSTLKIWEIRTKKLKQDLP 441
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 66.9 bits (156), Expect = 2e-11
Identities = 42/111 (37%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Frame = +3
Query: 159 GHDLIFLSRQNSHRVEADQRRKQLRYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLR 338
GH S + R+ + R + LR + GH +SDV + NY +GS DKT+R
Sbjct: 472 GHYFASCSHDRTARIWSMDRIQPLRIMA----GH---LSDVDWHPNCNYIATGSSDKTVR 524
Query: 339 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAEC 488
LWD+ G+ R F H VLS+A S D R + SG D TI +W+ + A C
Sbjct: 525 LWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARC 575
Score = 66.9 bits (156), Expect = 2e-11
Identities = 30/89 (33%), Positives = 47/89 (52%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 422
+ FIGH + + +S DG Y SG D T+ +WDL+ + H V S+++S +
Sbjct: 535 RIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGE 594
Query: 423 NRQIVSGSRDKTIKLWNTLAECKYTIQDE 509
+ SGS D T+KLW+ + K T +E
Sbjct: 595 GSLLASGSADCTVKLWDVTSSTKLTKAEE 623
Score = 45.6 bits (103), Expect = 4e-05
Identities = 22/74 (29%), Positives = 33/74 (44%)
Frame = +3
Query: 252 IGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 431
+GHS + S G++ LS S D T+RLW ++ H V FS
Sbjct: 415 LGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHY 474
Query: 432 IVSGSRDKTIKLWN 473
S S D+T ++W+
Sbjct: 475 FASCSHDRTARIWS 488
Score = 45.6 bits (103), Expect = 4e-05
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
GH++ + D S G+Y S S D+T R+W + + R H D V + + I
Sbjct: 458 GHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSD---VDWHPNCNYI 514
Query: 435 VSGSRDKTIKLWNT-LAEC 488
+GS DKT++LW+ EC
Sbjct: 515 ATGSSDKTVRLWDVQTGEC 533
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +2
Query: 551 HANPIIVSCGW-DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 727
H N ++ G D+TV++W + + +GH + ++ +SPDG ASG +D M+
Sbjct: 508 HPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMM 567
Query: 728 WDLNDGK 748
WDL+ +
Sbjct: 568 WDLSTAR 574
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/82 (29%), Positives = 39/82 (47%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GH V + SP+ + S D T+ +W L+ + +GH+ + +++ S +GS
Sbjct: 539 GHRSMVLSLAMSPD--GRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGS 596
Query: 689 LCASGGKDMKAMLWDLNDGKHL 754
L ASG D LWD+ L
Sbjct: 597 LLASGSADCTVKLWDVTSSTKL 618
Score = 39.9 bits (89), Expect = 0.002
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 1/117 (0%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCK-LKINHLGHSGYLNTVTVSPDG 685
GH+ V +FSP SC DRT ++W + + L+I +G+L+ V P+
Sbjct: 458 GHNYPVWDAQFSP--FGHYFASCSHDRTARIWSMDRIQPLRIM----AGHLSDVDWHPNC 511
Query: 686 SLCASGGKDMKAMLWDLNDGKHLHTLTTMISSLPCASQPTDTGYVLLSDLPSRSGIW 856
+ A+G D LWD+ G+ + S + + D Y+ D +W
Sbjct: 512 NYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMW 568
Score = 33.9 bits (74), Expect = 0.14
Identities = 26/103 (25%), Positives = 43/103 (41%)
Frame = +2
Query: 476 PCGVQVYHPR*GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGY 655
P G + Y GHS V FSP ++S D T+++W + + GH+
Sbjct: 405 PNGRRSYTLLLGHSGPVYSATFSP--PGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYP 462
Query: 656 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLTTMISSL 784
+ SP G AS D A +W ++ + L + +S +
Sbjct: 463 VWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDV 505
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 644 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 736
H+G LN ++S DGSL A G D +WD+
Sbjct: 352 HNG-LNCSSISHDGSLVAGGFSDSSIKVWDM 381
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN 225
L GH+G V +P D +LSSS D T+ +W + N
Sbjct: 414 LLGHSGPVYSATFSPP-GDFVLSSSADTTIRLWSTKLNAN 452
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 65.3 bits (152), Expect = 5e-11
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 422
K GH++F+ V + N +SGS+D+T+R+W++ GK R + H+ + SV F+ D
Sbjct: 122 KVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRD 181
Query: 423 NRQIVSGSRDKTIKLWNTL-AECKYTIQDE 509
IVS S D + K+W+ C T+ D+
Sbjct: 182 GSLIVSASHDGSCKIWDAKEGTCLKTLIDD 211
Score = 58.8 bits (136), Expect = 4e-09
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 422
K GH+ IS V S+DGN S S DKT+ LW R+E H+ + +A+S D
Sbjct: 37 KTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSD 96
Query: 423 NRQIVSGSRDKTIKLWNTLA--ECKYTIQDEDTAIGC 527
+ S S D T+++W+ + EC ++ + C
Sbjct: 97 SHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFC 133
Score = 56.4 bits (130), Expect = 2e-08
Identities = 29/85 (34%), Positives = 46/85 (54%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GH+++V CV F+P + +IVS +D T+++W + K HS +++V + DGS
Sbjct: 126 GHTNFVFCVNFNP--PSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGS 183
Query: 689 LCASGGKDMKAMLWDLNDGKHLHTL 763
L S D +WD +G L TL
Sbjct: 184 LIVSASHDGSCKIWDAKEGTCLKTL 208
Score = 52.4 bits (120), Expect = 4e-07
Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Frame = +3
Query: 243 KAFIGHSH---FISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA- 410
K + GH++ I+ ++G Y +SGS D + LWDL A +R E HT V+SV+
Sbjct: 249 KVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSC 308
Query: 411 FSVDNRQIVSGSR-DKTIKLW 470
V N SG+ DKTI++W
Sbjct: 309 HPVQNEISSSGNHLDKTIRIW 329
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/75 (33%), Positives = 38/75 (50%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GH+ +SCV+FS N N ++ S D+T+ +W TN L + GHS ++ + S D
Sbjct: 41 GHTAAISCVKFS-NDGN-LLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSH 98
Query: 689 LCASGGKDMKAMLWD 733
S D +WD
Sbjct: 99 YTCSASDDCTLRIWD 113
Score = 47.6 bits (108), Expect = 1e-05
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Frame = +3
Query: 270 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSV--AFSVDN-RQIVS 440
+S S +G + L + D TL+L + A GK + + HT V + AFSV N + IVS
Sbjct: 216 VSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVS 275
Query: 441 GSRDKTIKLWNTLA 482
GS D + LW+ A
Sbjct: 276 GSEDNCVYLWDLQA 289
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +3
Query: 258 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA-FSVDNRQI 434
HS IS V + DG+ +S S D + ++WD G + D +S A FS + + I
Sbjct: 169 HSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFI 228
Query: 435 VSGSRDKTIKLWN 473
+ + D T+KL N
Sbjct: 229 LVATLDSTLKLSN 241
Score = 35.1 bits (77), Expect = 0.062
Identities = 20/75 (26%), Positives = 32/75 (42%)
Frame = +2
Query: 641 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLTTMISSLPCASQPTDTGYV 820
GH+ ++ V S DG+L AS D +LW + +H S + + +D+ Y
Sbjct: 41 GHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYT 100
Query: 821 LLSDLPSRSGIWKAR 865
+ IW AR
Sbjct: 101 CSASDDCTLRIWDAR 115
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 62.9 bits (146), Expect = 3e-10
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 1/115 (0%)
Frame = +3
Query: 132 SNCN*SEI-PGHDLIFLSRQNSHRVEADQRRKQLRYTSKAFIGHSHFISDVVLSSDGNYA 308
SNC+ E P + + +++ D R+K T K GH+ IS + S DG +
Sbjct: 50 SNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYK---GHTRGISTIEFSPDGRWV 106
Query: 309 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
+SG D +++WDL AGK F+ H + S+ F + +GS D+T+K W+
Sbjct: 107 VSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWD 161
Score = 60.9 bits (141), Expect = 1e-09
Identities = 28/80 (35%), Positives = 42/80 (52%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 422
+AF GH S V G + SGS D LR+WD + ++ HT+ + ++ FS D
Sbjct: 43 RAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPD 102
Query: 423 NRQIVSGSRDKTIKLWNTLA 482
R +VSG D +K+W+ A
Sbjct: 103 GRWVVSGGLDNVVKVWDLTA 122
Score = 49.6 bits (113), Expect = 3e-06
Identities = 28/83 (33%), Positives = 37/83 (44%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GH S V F P + S D ++VW + GH+ ++T+ SPDG
Sbjct: 47 GHRSNCSAVEFHP--FGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGR 104
Query: 689 LCASGGKDMKAMLWDLNDGKHLH 757
SGG D +WDL GK LH
Sbjct: 105 WVVSGGLDNVVKVWDLTAGKLLH 127
Score = 49.2 bits (112), Expect = 4e-06
Identities = 22/74 (29%), Positives = 37/74 (50%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
GH+ + V +S+ L+G+ ++LWDL K R F H + +V F +
Sbjct: 5 GHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFL 64
Query: 435 VSGSRDKTIKLWNT 476
SGS D +++W+T
Sbjct: 65 ASGSSDTNLRVWDT 78
Score = 48.8 bits (111), Expect = 5e-06
Identities = 28/76 (36%), Positives = 37/76 (48%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GH+ +S + FSP+ +VS G D VKVW LT KL H G + ++ P
Sbjct: 89 GHTRGISTIEFSPD--GRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEF 146
Query: 689 LCASGGKDMKAMLWDL 736
L A+G D WDL
Sbjct: 147 LLATGSADRTVKFWDL 162
Score = 39.1 bits (87), Expect = 0.004
Identities = 26/116 (22%), Positives = 42/116 (36%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GH+ V V F N ++++ +K+W L K+ GH + V P G
Sbjct: 5 GHTSPVDSVAF--NSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGE 62
Query: 689 LCASGGKDMKAMLWDLNDGKHLHTLTTMISSLPCASQPTDTGYVLLSDLPSRSGIW 856
ASG D +WD + T + D +V+ L + +W
Sbjct: 63 FLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVW 118
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +3
Query: 312 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRD 452
+GS D+T++ WDL + V ++AF D + + G D
Sbjct: 150 TGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFCGLDD 196
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 61.7 bits (143), Expect = 6e-10
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 1/115 (0%)
Frame = +3
Query: 132 SNCN*SEI-PGHDLIFLSRQNSHRVEADQRRKQLRYTSKAFIGHSHFISDVVLSSDGNYA 308
SNC+ E P + + +++ D R+K T K GHS IS + + DG +
Sbjct: 101 SNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYK---GHSRGISTIRFTPDGRWV 157
Query: 309 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
+SG D +++WDL AGK F+ H + S+ F + +GS D+T+K W+
Sbjct: 158 VSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFWD 212
Score = 58.4 bits (135), Expect = 6e-09
Identities = 25/80 (31%), Positives = 43/80 (53%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 422
+AF GH S V G + SGS D L++WD+ + ++ H++ + ++ F+ D
Sbjct: 94 RAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPD 153
Query: 423 NRQIVSGSRDKTIKLWNTLA 482
R +VSG D +K+W+ A
Sbjct: 154 GRWVVSGGLDNVVKVWDLTA 173
Score = 51.6 bits (118), Expect = 7e-07
Identities = 28/83 (33%), Positives = 38/83 (45%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GH S V F P + S D +K+W + + GHS ++T+ +PDG
Sbjct: 98 GHRSNCSAVEFHP--FGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGR 155
Query: 689 LCASGGKDMKAMLWDLNDGKHLH 757
SGG D +WDL GK LH
Sbjct: 156 WVVSGGLDNVVKVWDLTAGKLLH 178
Score = 50.8 bits (116), Expect = 1e-06
Identities = 29/76 (38%), Positives = 38/76 (50%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GHS +S +RF+P+ +VS G D VKVW LT KL H G + ++ P
Sbjct: 140 GHSRGISTIRFTPD--GRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEF 197
Query: 689 LCASGGKDMKAMLWDL 736
L A+G D WDL
Sbjct: 198 LLATGSADRTVKFWDL 213
Score = 46.4 bits (105), Expect = 3e-05
Identities = 21/73 (28%), Positives = 34/73 (46%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
GH+ + V S L+G+ ++LWD+ K R F H + +V F +
Sbjct: 56 GHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFL 115
Query: 435 VSGSRDKTIKLWN 473
SGS D +K+W+
Sbjct: 116 ASGSSDANLKIWD 128
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/76 (26%), Positives = 33/76 (43%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GH+ V V F + A ++++ +K+W + K+ GH + V P G
Sbjct: 56 GHTSAVDSVAF--DSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGE 113
Query: 689 LCASGGKDMKAMLWDL 736
ASG D +WD+
Sbjct: 114 FLASGSSDANLKIWDI 129
Score = 35.5 bits (78), Expect = 0.047
Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
Frame = +3
Query: 234 YTSKAFIGHSHFISDVVLSSD-GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 410
Y + F+ HS ++ + + ++G D + LW + + HT V SVA
Sbjct: 6 YKLQEFLAHSANVNCLSIGKKTSRLFITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSVA 65
Query: 411 FSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDEDTAIGCHVSDSHP 548
F +++G+ IKLW+ + E K C + HP
Sbjct: 66 FDSAEVLVLAGASSGVIKLWD-VEEAKMVRAFTGHRSNCSAVEFHP 110
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/85 (21%), Positives = 36/85 (42%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL 691
HS V+C+ + + ++ G D V +W + ++ GH+ +++V L
Sbjct: 14 HSANVNCLSIGKKTSR-LFITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSVAFDSAEVL 72
Query: 692 CASGGKDMKAMLWDLNDGKHLHTLT 766
+G LWD+ + K + T
Sbjct: 73 VLAGASSGVIKLWDVEEAKMVRAFT 97
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +3
Query: 312 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
+GS D+T++ WDL + V S+ F D R + G D ++K+++
Sbjct: 201 TGSADRTVKFWDLETFELIGSTRPEATGVRSIKFHPDGRTLFCG-LDDSLKVYS 253
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 61.3 bits (142), Expect = 8e-10
Identities = 34/94 (36%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
GH + ++ S S SWD T+RLWD+ A K T H DVL+VAF D +Q+
Sbjct: 475 GHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGKQL 534
Query: 435 VSGSRDKTIKLWNTL-AECKYTIQDEDTAIGCHV 533
S + D I W+T+ YTI+ G V
Sbjct: 535 ASSTLDGQINFWDTIEGVLMYTIEGRRDIAGGRV 568
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
GH ++ V S D +G+ D +++W++ +G F +HT V ++ F DN +
Sbjct: 347 GHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSL 406
Query: 435 VSGSRDKTIKLWN 473
+S S D T++ W+
Sbjct: 407 LSASLDGTVRAWD 419
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/85 (30%), Positives = 40/85 (47%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GH V + FSP ++ S WD TV++W + K + H+ + TV PDG
Sbjct: 475 GHEAPVHGLMFSP--LTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGK 532
Query: 689 LCASGGKDMKAMLWDLNDGKHLHTL 763
AS D + WD +G ++T+
Sbjct: 533 QLASSTLDGQINFWDTIEGVLMYTI 557
Score = 41.1 bits (92), Expect = 0.001
Identities = 24/91 (26%), Positives = 37/91 (40%)
Frame = +2
Query: 599 VWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLTTMIS 778
VW + GH +N VT SPD L A+G D K +W++ G T T +
Sbjct: 333 VWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTN 392
Query: 779 SLPCASQPTDTGYVLLSDLPSRSGIWKARRW 871
++ D +L + L W +R+
Sbjct: 393 AVTALHFMADNHSLLSASLDGTVRAWDFKRY 423
Score = 37.1 bits (82), Expect = 0.015
Identities = 23/87 (26%), Positives = 37/87 (42%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GH V+CV +SP+ + ++ + D VKVW++ + I H+ + + D
Sbjct: 347 GHYFDVNCVTYSPD--SQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNH 404
Query: 689 LCASGGKDMKAMLWDLNDGKHLHTLTT 769
S D WD K+ T TT
Sbjct: 405 SLLSASLDGTVRAWDFKRYKNYKTYTT 431
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 61.3 bits (142), Expect = 8e-10
Identities = 34/94 (36%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
GH + ++ S S SWD T+RLWD+ A K T H DVL+VAF D +Q+
Sbjct: 515 GHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGKQL 574
Query: 435 VSGSRDKTIKLWNTL-AECKYTIQDEDTAIGCHV 533
S + D I W+T+ YTI+ G V
Sbjct: 575 ASSTLDGQINFWDTIEGVLMYTIEGRRDIAGGRV 608
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
GH ++ V S D +G+ D +++W++ +G F +HT V ++ F DN +
Sbjct: 387 GHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSL 446
Query: 435 VSGSRDKTIKLWN 473
+S S D T++ W+
Sbjct: 447 LSASLDGTVRAWD 459
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/85 (30%), Positives = 40/85 (47%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GH V + FSP ++ S WD TV++W + K + H+ + TV PDG
Sbjct: 515 GHEAPVHGLMFSP--LTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGK 572
Query: 689 LCASGGKDMKAMLWDLNDGKHLHTL 763
AS D + WD +G ++T+
Sbjct: 573 QLASSTLDGQINFWDTIEGVLMYTI 597
Score = 41.1 bits (92), Expect = 0.001
Identities = 24/91 (26%), Positives = 37/91 (40%)
Frame = +2
Query: 599 VWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLTTMIS 778
VW + GH +N VT SPD L A+G D K +W++ G T T +
Sbjct: 373 VWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTN 432
Query: 779 SLPCASQPTDTGYVLLSDLPSRSGIWKARRW 871
++ D +L + L W +R+
Sbjct: 433 AVTALHFMADNHSLLSASLDGTVRAWDFKRY 463
Score = 37.1 bits (82), Expect = 0.015
Identities = 23/87 (26%), Positives = 37/87 (42%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GH V+CV +SP+ + ++ + D VKVW++ + I H+ + + D
Sbjct: 387 GHYFDVNCVTYSPD--SQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNH 444
Query: 689 LCASGGKDMKAMLWDLNDGKHLHTLTT 769
S D WD K+ T TT
Sbjct: 445 SLLSASLDGTVRAWDFKRYKNYKTYTT 471
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 60.9 bits (141), Expect = 1e-09
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
GH I V S+ ++ S DKT+++W ++ G + FE HT VL +F D Q
Sbjct: 539 GHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQF 598
Query: 435 VSGSRDKTIKLWN-TLAECKYTI-QDED 512
VS D +KLWN +EC T Q ED
Sbjct: 599 VSCGADGLLKLWNVNTSECIATYDQHED 626
Score = 56.8 bits (131), Expect = 2e-08
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Frame = +3
Query: 249 FIGHSHFISDVVLSSDGN--YALSGSWDKTLRLWDLAAGKTTRR----FEDHTKDVLSVA 410
F GH +S ++ D N +SGS D T+R+WDL A T ++ E H V S+A
Sbjct: 140 FRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIA 199
Query: 411 FSVDNRQIVSGSRDKTIKLWNTL-AECKYTI 500
S D + S RDK + LW+ CK T+
Sbjct: 200 LSEDGLTLFSAGRDKVVNLWDLHDYSCKATV 230
Score = 51.2 bits (117), Expect = 9e-07
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Frame = +3
Query: 240 SKAFIGHSHFIS--DVVLSSDGNYAL-SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 410
S GH + D +SS GN + +GS DKT+RLW+ + H D+L+VA
Sbjct: 394 SYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVA 453
Query: 411 FSVDNRQ-IVSGSRDKTIKLWN 473
F+ + VSGS D+T+K+W+
Sbjct: 454 FAKKSFSFFVSGSGDRTLKVWS 475
Score = 50.4 bits (115), Expect = 2e-06
Identities = 25/83 (30%), Positives = 42/83 (50%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
G SD ++ + SP+ + ++ S G R ++VW L K + GH G + + G
Sbjct: 58 GESDTLTALALSPD--DKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGG 115
Query: 689 LCASGGKDMKAMLWDLNDGKHLH 757
L A+ G D K ++WD++ G H
Sbjct: 116 LLATAGADRKVLVWDVDGGFCTH 138
Score = 47.6 bits (108), Expect = 1e-05
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLT--NCKLKINHL--GHSGYLNTVTVS 676
GH VS + F P+ I++S D TV+VW L N + K + H + ++ +S
Sbjct: 142 GHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALS 201
Query: 677 PDGSLCASGGKDMKAMLWDLNDGKHLHTLTT 769
DG S G+D LWDL+D T+ T
Sbjct: 202 EDGLTLFSAGRDKVVNLWDLHDYSCKATVAT 232
Score = 44.8 bits (101), Expect = 8e-05
Identities = 21/78 (26%), Positives = 39/78 (50%)
Frame = +3
Query: 237 TSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 416
T H I+ V ++ + + +GS D+T +W L + H + + SV FS
Sbjct: 491 TRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFS 550
Query: 417 VDNRQIVSGSRDKTIKLW 470
++ +++ S DKT+K+W
Sbjct: 551 TVDQCVMTASGDKTVKIW 568
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 422
+++ GH + + + G + D+ + +WD+ G T F H V S+ F D
Sbjct: 96 RSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPD 155
Query: 423 NRQ--IVSGSRDKTIKLWNTLAE 485
+ + ++SGS D T+++W+ A+
Sbjct: 156 SNKNILISGSDDATVRVWDLNAK 178
Score = 42.3 bits (95), Expect = 4e-04
Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 2/95 (2%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 422
K F GH+ + +DG +S D L+LW++ + ++ H V ++A
Sbjct: 577 KTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKK 636
Query: 423 NRQIVSGSRDKTIKLW--NTLAECKYTIQDEDTAI 521
I +G D I LW +T ++ + + E+ AI
Sbjct: 637 TEMIATGGGDAVINLWHDSTASDKEDDFRKEEEAI 671
Score = 41.9 bits (94), Expect = 5e-04
Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Frame = +3
Query: 240 SKAFIGHSHFISDVVLSSDGNYALSGSWD-KTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 416
SK +G++ I+D+ D L+ + + + +R++D+A + H + VLS+
Sbjct: 351 SKRLVGYNEEIADMKFLGDEEQFLAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSLDTC 410
Query: 417 VD---NRQIVSGSRDKTIKLWNTLAE 485
V N IV+GS+DKT++LWN ++
Sbjct: 411 VSSSGNVLIVTGSKDKTVRLWNATSK 436
Score = 37.5 bits (83), Expect = 0.012
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 11/83 (13%)
Frame = +3
Query: 255 GHSHFISDVVLSSDG-NYALSGSWDKTLRLWDLAAG----------KTTRRFEDHTKDVL 401
GH+ I V + ++ +SGS D+TL++W L KT H KD+
Sbjct: 444 GHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDIN 503
Query: 402 SVAFSVDNRQIVSGSRDKTIKLW 470
SVA + ++ + +GS D+T +W
Sbjct: 504 SVAVARNDSLVCTGSEDRTASIW 526
Score = 37.1 bits (82), Expect = 0.015
Identities = 21/84 (25%), Positives = 39/84 (46%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GH + V FS + +++ D+TVK+W +++ GH+ + + DG+
Sbjct: 539 GHKRRIFSVEFST--VDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGT 596
Query: 689 LCASGGKDMKAMLWDLNDGKHLHT 760
S G D LW++N + + T
Sbjct: 597 QFVSCGADGLLKLWNVNTSECIAT 620
Score = 34.7 bits (76), Expect = 0.082
Identities = 28/124 (22%), Positives = 48/124 (38%)
Frame = +2
Query: 437 VWFSRQDYQTLEHPCGVQVYHPR*GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTN 616
VW + E P ++ H ++ V + N + ++ + DRT +W L +
Sbjct: 473 VWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDS--LVCTGSEDRTASIWRLPD 530
Query: 617 CKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLTTMISSLPCAS 796
+ GH + +V S + D +W ++DG L T SS+ AS
Sbjct: 531 LVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRAS 590
Query: 797 QPTD 808
TD
Sbjct: 591 FITD 594
Score = 32.3 bits (70), Expect = 0.44
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +2
Query: 569 VSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 736
++C + + T+ +K G S L + +SPD L S G + +WDL
Sbjct: 34 IACACGDVINIVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDL 89
Score = 31.5 bits (68), Expect = 0.76
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +2
Query: 569 VSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 730
VSCG D +K+W++ + + H + + V + A+GG D LW
Sbjct: 599 VSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLW 652
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 557 NPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDG-SLCASGGKDMKAMLWD 733
N +IV+ D+TV++W+ T+ GH+G + V + S SG D +W
Sbjct: 416 NVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWS 475
Query: 734 LN 739
L+
Sbjct: 476 LD 477
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 100 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 210
G GHNG + +A K +S S D+TL VW L
Sbjct: 440 GVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSL 476
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 60.5 bits (140), Expect = 1e-09
Identities = 29/88 (32%), Positives = 48/88 (54%)
Frame = +3
Query: 210 DQRRKQLRYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 389
D R+K +T K GH+ ++ + + DG + +SG D +++WDL AGK F+ H
Sbjct: 222 DIRKKGCIHTYK---GHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHE 278
Query: 390 KDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
+ S+ F + +GS DKT+K W+
Sbjct: 279 GKIQSLDFHPHEFLLATGSADKTVKFWD 306
Score = 52.8 bits (121), Expect = 3e-07
Identities = 25/80 (31%), Positives = 38/80 (47%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 422
+ GH V G + SGS D L++WD+ ++ HT+ V + F+ D
Sbjct: 188 RTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPD 247
Query: 423 NRQIVSGSRDKTIKLWNTLA 482
R IVSG D +K+W+ A
Sbjct: 248 GRWIVSGGEDNVVKVWDLTA 267
Score = 52.0 bits (119), Expect = 5e-07
Identities = 35/109 (32%), Positives = 50/109 (45%)
Frame = +2
Query: 497 HPR*GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVS 676
H GH+ V+ +RF+P+ IVS G D VKVW LT KL H G + ++
Sbjct: 230 HTYKGHTRGVNVLRFTPD--GRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFH 287
Query: 677 PDGSLCASGGKDMKAMLWDLNDGKHLHTLTTMISSLPCASQPTDTGYVL 823
P L A+G D WDL + + + T + + C + D VL
Sbjct: 288 PHEFLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKSVL 336
Score = 48.4 bits (110), Expect = 6e-06
Identities = 23/73 (31%), Positives = 33/73 (45%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
GHS I V + +G+ T++LWDL K R H + +SV F
Sbjct: 150 GHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFF 209
Query: 435 VSGSRDKTIKLWN 473
SGS D +K+W+
Sbjct: 210 ASGSLDTNLKIWD 222
Score = 48.0 bits (109), Expect = 8e-06
Identities = 30/119 (25%), Positives = 53/119 (44%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL 691
HS V+C++ ++ ++V+ G D V +W + ++ GHS +++VT L
Sbjct: 108 HSAAVNCLKIG-RKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGL 166
Query: 692 CASGGKDMKAMLWDLNDGKHLHTLTTMISSLPCASQPTDTGYVLLSDLPSRSGIWKARR 868
A+G LWDL + K + TLT S+ + + L + IW R+
Sbjct: 167 VAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRK 225
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/77 (29%), Positives = 36/77 (46%)
Frame = +2
Query: 527 SCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG 706
+CV + + S D +K+W + + GH+ +N + +PDG SGG
Sbjct: 196 NCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGG 255
Query: 707 KDMKAMLWDLNDGKHLH 757
+D +WDL GK LH
Sbjct: 256 EDNVVKVWDLTAGKLLH 272
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GHS + V F + ++ + T+K+W L K+ GH +V P G
Sbjct: 150 GHSSGIDSVTFDASEG--LVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGE 207
Query: 689 LCASGGKDMKAMLWDLNDGKHLHT 760
ASG D +WD+ +HT
Sbjct: 208 FFASGSLDTNLKIWDIRKKGCIHT 231
Score = 38.7 bits (86), Expect = 0.005
Identities = 26/107 (24%), Positives = 46/107 (42%), Gaps = 1/107 (0%)
Frame = +3
Query: 174 FLSRQNSHRVEADQRRKQLRYTSKAFIGHSHFISDVVLSSDGNYAL-SGSWDKTLRLWDL 350
F+S N+ R + L + + F+ HS ++ + + + L +G D + LW +
Sbjct: 80 FVSAMNTKRAYKLRILFSLISSFREFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAI 139
Query: 351 AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 491
H+ + SV F + +G+ TIKLW+ L E K
Sbjct: 140 GKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWD-LEEAK 185
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/54 (25%), Positives = 30/54 (55%)
Frame = +3
Query: 312 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
+GS DKT++ WDL + T V + F+ D + ++ G ++ ++K+++
Sbjct: 295 TGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKSVLCGLQE-SLKIFS 347
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 60.1 bits (139), Expect = 2e-09
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 422
+ F HS ++ + S DG+ LS S+D+T R+ L +GK + F HT V F+ D
Sbjct: 299 RRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSD 358
Query: 423 NRQIVSGSRDKTIKLWNT-LAECKYTIQ 503
+I++ S D T+K+W++ +C T +
Sbjct: 359 GSRIITASSDCTVKVWDSKTTDCLQTFK 386
Score = 54.8 bits (126), Expect = 7e-08
Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = +3
Query: 219 RKQLRYTS-KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD 395
+K L+Y + ++F+ H + + S D SGS D +++W + G RRF+ H++
Sbjct: 248 KKDLQYQADESFMMHDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQG 307
Query: 396 VLSVAFSVDNRQIVSGSRDKTIKL 467
V S++FS D Q++S S D+T ++
Sbjct: 308 VTSLSFSRDGSQLLSTSFDQTARI 331
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Frame = +3
Query: 288 SSDGNYALSGSWDKTLRLWDLAAGKTTR--------RFEDHTKDVLSVAFSVDNRQIVSG 443
S DG + S S D + +WD +GK + F H VL + FS D+ + SG
Sbjct: 222 SPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLASG 281
Query: 444 SRDKTIKLW 470
S+D IK+W
Sbjct: 282 SQDGKIKIW 290
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/74 (28%), Positives = 37/74 (50%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL 691
HS V+ + FS + + ++S +D+T ++ L + KL GH+ Y+N + DGS
Sbjct: 304 HSQGVTSLSFSRDGSQ--LLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSR 361
Query: 692 CASGGKDMKAMLWD 733
+ D +WD
Sbjct: 362 IITASSDCTVKVWD 375
Score = 35.5 bits (78), Expect = 0.047
Identities = 27/118 (22%), Positives = 48/118 (40%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL 691
H D V C+ FS + + ++ S D +K+W + HS + +++ S DGS
Sbjct: 262 HDDPVLCIDFSRD--SEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQ 319
Query: 692 CASGGKDMKAMLWDLNDGKHLHTLTTMISSLPCASQPTDTGYVLLSDLPSRSGIWKAR 865
S D A + L GK L S + A +D ++ + +W ++
Sbjct: 320 LLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWDSK 377
Score = 34.7 bits (76), Expect = 0.082
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 8/107 (7%)
Frame = +2
Query: 449 RQDYQTLEHPCGVQVYHPR*GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLK 628
+QD + HP V + + G C RFSP+ + S D ++VW + KLK
Sbjct: 193 KQDVEDT-HP-NVLTHTIKFGKKSHAECARFSPD--GQFLASSSVDGFIEVWDYISGKLK 248
Query: 629 IN--------HLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 745
+ + H + + S D + ASG +D K +W + G
Sbjct: 249 KDLQYQADESFMMHDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTG 295
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = +3
Query: 285 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 464
+S+ G++ DK L ++ +G H KDV+ + + + S D T+K
Sbjct: 448 VSTKGDWIYCIGEDKKLYCFNYQSGGLEHFMMVHEKDVIGITHHPHRNLLATYSEDCTMK 507
Query: 465 LW 470
LW
Sbjct: 508 LW 509
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/88 (31%), Positives = 48/88 (54%)
Frame = +3
Query: 210 DQRRKQLRYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 389
D R+K +T K GH+ ++ + + DG + +SG D +++WDL AGK F+ H
Sbjct: 129 DIRKKGCIHTYK---GHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHE 185
Query: 390 KDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
+ S+ F + +GS D+T+K W+
Sbjct: 186 GQIQSLDFHPHEFLLATGSADRTVKFWD 213
Score = 52.0 bits (119), Expect = 5e-07
Identities = 24/80 (30%), Positives = 38/80 (47%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 422
+ GH V G + SGS D L++WD+ ++ HT+ V + F+ D
Sbjct: 95 RTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPD 154
Query: 423 NRQIVSGSRDKTIKLWNTLA 482
R +VSG D +K+W+ A
Sbjct: 155 GRWVVSGGEDNIVKVWDLTA 174
Score = 51.6 bits (118), Expect = 7e-07
Identities = 29/80 (36%), Positives = 39/80 (48%)
Frame = +2
Query: 497 HPR*GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVS 676
H GH+ V+ +RF+P+ +VS G D VKVW LT KL H G + ++
Sbjct: 137 HTYKGHTRGVNVLRFTPD--GRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFH 194
Query: 677 PDGSLCASGGKDMKAMLWDL 736
P L A+G D WDL
Sbjct: 195 PHEFLLATGSADRTVKFWDL 214
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/73 (31%), Positives = 33/73 (45%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
GHS I V + +G+ T++LWDL K R H + +SV F
Sbjct: 57 GHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFF 116
Query: 435 VSGSRDKTIKLWN 473
SGS D +K+W+
Sbjct: 117 ASGSLDTNLKIWD 129
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/85 (29%), Positives = 43/85 (50%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL 691
HS V+C++ ++ ++V+ G D V +W + ++ GHS +++VT L
Sbjct: 15 HSAAVNCLKIG-RKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVL 73
Query: 692 CASGGKDMKAMLWDLNDGKHLHTLT 766
A+G LWDL + K + TLT
Sbjct: 74 VAAGAASGTIKLWDLEEAKIVRTLT 98
Score = 44.8 bits (101), Expect = 8e-05
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGW-DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDG 685
GHS + V F A+ ++V+ G T+K+W L K+ GH +V P G
Sbjct: 57 GHSSGIDSVTFD---ASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
Query: 686 SLCASGGKDMKAMLWDLNDGKHLHT 760
ASG D +WD+ +HT
Sbjct: 114 EFFASGSLDTNLKIWDIRKKGCIHT 138
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/76 (27%), Positives = 34/76 (44%)
Frame = +2
Query: 527 SCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG 706
+C+ + S D +K+W + + GH+ +N + +PDG SGG
Sbjct: 103 NCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGG 162
Query: 707 KDMKAMLWDLNDGKHL 754
+D +WDL GK L
Sbjct: 163 EDNIVKVWDLTAGKLL 178
Score = 39.5 bits (88), Expect = 0.003
Identities = 26/106 (24%), Positives = 42/106 (39%), Gaps = 1/106 (0%)
Frame = +3
Query: 234 YTSKAFIGHSHFISDVVLSSDGNYAL-SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 410
Y + F+ HS ++ + + + L +G D + LW + H+ + SV
Sbjct: 7 YKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVT 66
Query: 411 FSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDEDTAIGCHVSDSHP 548
F + +G+ TIKLW+ L E K C D HP
Sbjct: 67 FDASEVLVAAGAASGTIKLWD-LEEAKIVRTLTGHRSNCISVDFHP 111
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/54 (24%), Positives = 31/54 (57%)
Frame = +3
Query: 312 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
+GS D+T++ WDL + T V ++F+ D + ++ G ++ ++K+++
Sbjct: 202 TGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCGLQE-SLKIFS 254
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/88 (31%), Positives = 48/88 (54%)
Frame = +3
Query: 210 DQRRKQLRYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 389
D R+K +T K GH+ ++ + + DG + +SG D +++WDL AGK F+ H
Sbjct: 129 DIRKKGCIHTYK---GHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHE 185
Query: 390 KDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
+ S+ F + +GS D+T+K W+
Sbjct: 186 GQIQSLDFHPHEFLLATGSADRTVKFWD 213
Score = 52.0 bits (119), Expect = 5e-07
Identities = 24/80 (30%), Positives = 38/80 (47%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 422
+ GH V G + SGS D L++WD+ ++ HT+ V + F+ D
Sbjct: 95 RTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPD 154
Query: 423 NRQIVSGSRDKTIKLWNTLA 482
R +VSG D +K+W+ A
Sbjct: 155 GRWVVSGGEDNIVKVWDLTA 174
Score = 51.6 bits (118), Expect = 7e-07
Identities = 29/80 (36%), Positives = 39/80 (48%)
Frame = +2
Query: 497 HPR*GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVS 676
H GH+ V+ +RF+P+ +VS G D VKVW LT KL H G + ++
Sbjct: 137 HTYKGHTRGVNVLRFTPD--GRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFH 194
Query: 677 PDGSLCASGGKDMKAMLWDL 736
P L A+G D WDL
Sbjct: 195 PHEFLLATGSADRTVKFWDL 214
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/73 (31%), Positives = 33/73 (45%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
GHS I V + +G+ T++LWDL K R H + +SV F
Sbjct: 57 GHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFF 116
Query: 435 VSGSRDKTIKLWN 473
SGS D +K+W+
Sbjct: 117 ASGSLDTNLKIWD 129
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/85 (29%), Positives = 43/85 (50%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL 691
HS V+C++ ++ ++V+ G D V +W + ++ GHS +++VT L
Sbjct: 15 HSAAVNCLKIG-RKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVL 73
Query: 692 CASGGKDMKAMLWDLNDGKHLHTLT 766
A+G LWDL + K + TLT
Sbjct: 74 VAAGAASGTIKLWDLEEAKIVRTLT 98
Score = 44.8 bits (101), Expect = 8e-05
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGW-DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDG 685
GHS + V F A+ ++V+ G T+K+W L K+ GH +V P G
Sbjct: 57 GHSSGIDSVTFD---ASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
Query: 686 SLCASGGKDMKAMLWDLNDGKHLHT 760
ASG D +WD+ +HT
Sbjct: 114 EFFASGSLDTNLKIWDIRKKGCIHT 138
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/76 (27%), Positives = 34/76 (44%)
Frame = +2
Query: 527 SCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG 706
+C+ + S D +K+W + + GH+ +N + +PDG SGG
Sbjct: 103 NCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGG 162
Query: 707 KDMKAMLWDLNDGKHL 754
+D +WDL GK L
Sbjct: 163 EDNIVKVWDLTAGKLL 178
Score = 39.5 bits (88), Expect = 0.003
Identities = 26/106 (24%), Positives = 42/106 (39%), Gaps = 1/106 (0%)
Frame = +3
Query: 234 YTSKAFIGHSHFISDVVLSSDGNYAL-SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 410
Y + F+ HS ++ + + + L +G D + LW + H+ + SV
Sbjct: 7 YKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVT 66
Query: 411 FSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDEDTAIGCHVSDSHP 548
F + +G+ TIKLW+ L E K C D HP
Sbjct: 67 FDASEVLVAAGAASGTIKLWD-LEEAKIVRTLTGHRSNCISVDFHP 111
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/54 (24%), Positives = 31/54 (57%)
Frame = +3
Query: 312 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
+GS D+T++ WDL + T V ++F+ D + ++ G ++ ++K+++
Sbjct: 202 TGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCGLQE-SLKIFS 254
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 56.4 bits (130), Expect = 2e-08
Identities = 25/73 (34%), Positives = 36/73 (49%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
GHS + + DG A S D R+WDL G++ F+ H K V SV FS + +
Sbjct: 379 GHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHL 438
Query: 435 VSGSRDKTIKLWN 473
SG D ++W+
Sbjct: 439 ASGGEDNQCRIWD 451
Score = 54.4 bits (125), Expect = 9e-08
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 1/120 (0%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GHS V + F + A + SCG D +VW L + + GH + +V SP+G
Sbjct: 379 GHSRSVYGIAFQQDGA--LAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGY 436
Query: 689 LCASGGKDMKAMLWDLNDGKHLHTLTTMISSLPCASQPTDTGYVL-LSDLPSRSGIWKAR 865
ASGG+D + +WDL K L+ + + + GY L + + IW R
Sbjct: 437 HLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGR 496
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/77 (31%), Positives = 36/77 (46%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 422
+ F GH ++ V G Y + S+DKT RLWD+ G E H++ V +AF D
Sbjct: 333 QTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQD 392
Query: 423 NRQIVSGSRDKTIKLWN 473
S D ++W+
Sbjct: 393 GALAASCGLDSLARVWD 409
Score = 45.6 bits (103), Expect = 4e-05
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDG 685
GH D ++ V F P+ + + +D+T ++W + T +L + GHS + + DG
Sbjct: 337 GHLDRLARVAFHPS--GKYLGTTSYDKTWRLWDINTGAELLLQE-GHSRSVYGIAFQQDG 393
Query: 686 SLCASGGKDMKAMLWDLNDGKHL 754
+L AS G D A +WDL G+ +
Sbjct: 394 ALAASCGLDSLARVWDLRTGRSI 416
Score = 41.9 bits (94), Expect = 5e-04
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Frame = +3
Query: 225 QLRYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 404
Q+ T H +DVV S + + S D+T +LW G + FE H +
Sbjct: 286 QVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWK-TDGTLLQTFEGHLDRLAR 344
Query: 405 VAFSVDNRQIVSGSRDKTIKLW--NTLAE 485
VAF + + + S DKT +LW NT AE
Sbjct: 345 VAFHPSGKYLGTTSYDKTWRLWDINTGAE 373
Score = 39.5 bits (88), Expect = 0.003
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Frame = +3
Query: 159 GHDLIFLSRQNSHRVEADQRRKQLRYTSKAFIGHSHFISDVVLS-SDGNYALSGSWDKTL 335
G+ L N R+ + RK L Y A H++ +S V +G + + S+D +
Sbjct: 435 GYHLASGGEDNQCRIWDLRMRKSL-YIIPA---HANLVSQVKYEPQEGYFLATASYDMKV 490
Query: 336 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 476
+W + H V S+ + D+ I + S D+TIKLW +
Sbjct: 491 NIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLWTS 537
Score = 33.9 bits (74), Expect = 0.14
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +3
Query: 249 FIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDN 425
F GH + V S +G + SG D R+WDL K+ H V V + +
Sbjct: 419 FQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEG 478
Query: 426 RQIVSGSRDKTIKLWN 473
+ + S D + +W+
Sbjct: 479 YFLATASYDMKVNIWS 494
Score = 33.5 bits (73), Expect = 0.19
Identities = 17/73 (23%), Positives = 33/73 (45%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL 691
H++ VS V++ P + + +D V +W + L + GH + ++ ++ D S
Sbjct: 464 HANLVSQVKYEPQEGY-FLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSC 522
Query: 692 CASGGKDMKAMLW 730
A+ D LW
Sbjct: 523 IATVSHDRTIKLW 535
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 56.0 bits (129), Expect = 3e-08
Identities = 33/119 (27%), Positives = 49/119 (41%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GH WV V F P+ N + DRT+K+W + LK+ GH G + + VS +
Sbjct: 168 GHLGWVRSVAFDPS--NEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHT 225
Query: 689 LCASGGKDMKAMLWDLNDGKHLHTLTTMISSLPCASQPTDTGYVLLSDLPSRSGIWKAR 865
S G D + WDL K + + + + C + VL S +W R
Sbjct: 226 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIR 284
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/77 (31%), Positives = 38/77 (49%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 422
+++ GH H + + L + L+G D R+WD+ K H DV SV
Sbjct: 248 RSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRT-KMQIFVLPHDSDVFSVLARPT 306
Query: 423 NRQIVSGSRDKTIKLWN 473
+ Q+++GS D TIK W+
Sbjct: 307 DPQVITGSHDSTIKFWD 323
Score = 44.8 bits (101), Expect = 8e-05
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
GH ++ V + +GS D+T+++WD+A G H V +A S + +
Sbjct: 168 GHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYM 227
Query: 435 VSGSRDKTIKLWN 473
S DK +K W+
Sbjct: 228 FSAGDDKQVKCWD 240
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/89 (22%), Positives = 39/89 (43%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
GH + + +S+ Y S DK ++ WDL K R + H V +A +
Sbjct: 210 GHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVV 269
Query: 435 VSGSRDKTIKLWNTLAECKYTIQDEDTAI 521
++G RD ++W+ + + + D+ +
Sbjct: 270 LTGGRDSVCRVWDIRTKMQIFVLPHDSDV 298
Score = 41.5 bits (93), Expect = 7e-04
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 1/122 (0%)
Frame = +2
Query: 467 LEHPCGVQVYHPR*GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGH 646
LE ++ YH GH V C+ P ++++ G D +VW + K++I L H
Sbjct: 241 LEQNKVIRSYH---GHLHGVYCLALHPTL--DVVLTGGRDSVCRVWDIRT-KMQIFVLPH 294
Query: 647 SGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLTTMISSL-PCASQPTDTGYVL 823
+ +V P +G D WDL GK + T+T ++ A P + +V
Sbjct: 295 DSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKENDFVS 354
Query: 824 LS 829
S
Sbjct: 355 AS 356
Score = 39.5 bits (88), Expect = 0.003
Identities = 29/119 (24%), Positives = 47/119 (39%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GH V + S H + S G D+ VK W L K+ ++ GH + + + P
Sbjct: 210 GHIGQVRGLAVSNRHT--YMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLD 267
Query: 689 LCASGGKDMKAMLWDLNDGKHLHTLTTMISSLPCASQPTDTGYVLLSDLPSRSGIWKAR 865
+ +GG+D +WD+ + L ++PTD V+ S W R
Sbjct: 268 VVLTGGRDSVCRVWDIRTKMQIFVLPHDSDVFSVLARPTDP-QVITGSHDSTIKFWDLR 325
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/69 (28%), Positives = 30/69 (43%)
Frame = +3
Query: 258 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 437
H + V+ ++GS D T++ WDL GK+ +H K V ++A V
Sbjct: 294 HDSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKENDFV 353
Query: 438 SGSRDKTIK 464
S S D K
Sbjct: 354 SASADNIKK 362
Score = 35.1 bits (77), Expect = 0.062
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +3
Query: 351 AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDEDTAI-G 524
A K R + H V SVAF N +GS D+TIK+W+ K T+ + G
Sbjct: 158 APWKNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRG 217
Query: 525 CHVSDSHPIM 554
VS+ H M
Sbjct: 218 LAVSNRHTYM 227
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 204
L+GH GWV +A +P + + S D+T+ +W
Sbjct: 166 LQGHLGWVRSVAFDPS-NEWFCTGSADRTIKIW 197
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 56.0 bits (129), Expect = 3e-08
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
Frame = +3
Query: 234 YTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 413
YT GH + + ++ G +SG +K LR+WD G + + HT +V +
Sbjct: 204 YTPTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLL 263
Query: 414 SVDNRQIVSGSRDKTIKLWNT-LAECKYTI---QDEDTAIGCHVSDSH 545
R +SGS D I+LW+ C +T D A+ C+ S SH
Sbjct: 264 DSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSH 311
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/71 (33%), Positives = 38/71 (53%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
GH+ + ++L S G + LSGS D +RLWDL + + HT V ++A + +
Sbjct: 253 GHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHV 312
Query: 435 VSGSRDKTIKL 467
SG RD+ + L
Sbjct: 313 YSGGRDQCLYL 323
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/92 (26%), Positives = 39/92 (42%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GH + S + N ++VS G ++ ++VW + GH+ + + + G
Sbjct: 211 GHKE--SVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGR 268
Query: 689 LCASGGKDMKAMLWDLNDGKHLHTLTTMISSL 784
C SG D LWDL + LHT S+
Sbjct: 269 FCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSV 300
Score = 36.7 bits (81), Expect = 0.020
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH-LTNCKLKINHLGHSGYLNTVTV-SPDG 685
H DWV+ + +VSC D TVK W L++ HS Y+ + V + +
Sbjct: 83 HVDWVNDAALA---GESTLVSCSSDTTVKTWDGLSDGVCTRTLRQHSDYVTCLAVAAKNN 139
Query: 686 SLCASGGKDMKAMLWDL 736
++ ASGG + +WD+
Sbjct: 140 NVVASGGLGGEVFIWDI 156
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 393 DVLSVAFSVDNRQIVSGSRDKTIKLW 470
DVL + S D + +GSRD T+K W
Sbjct: 42 DVLKSSVSNDQSYLFTGSRDGTLKRW 67
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 56.0 bits (129), Expect = 3e-08
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
Frame = +3
Query: 234 YTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 413
YT GH + + ++ G +SG +K LR+WD G + + HT +V +
Sbjct: 204 YTPTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLL 263
Query: 414 SVDNRQIVSGSRDKTIKLWNT-LAECKYTI---QDEDTAIGCHVSDSH 545
R +SGS D I+LW+ C +T D A+ C+ S SH
Sbjct: 264 DSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSH 311
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/71 (33%), Positives = 38/71 (53%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
GH+ + ++L S G + LSGS D +RLWDL + + HT V ++A + +
Sbjct: 253 GHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHV 312
Query: 435 VSGSRDKTIKL 467
SG RD+ + L
Sbjct: 313 YSGGRDQCLYL 323
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/92 (26%), Positives = 39/92 (42%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GH + S + N ++VS G ++ ++VW + GH+ + + + G
Sbjct: 211 GHKE--SVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGR 268
Query: 689 LCASGGKDMKAMLWDLNDGKHLHTLTTMISSL 784
C SG D LWDL + LHT S+
Sbjct: 269 FCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSV 300
Score = 36.7 bits (81), Expect = 0.020
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH-LTNCKLKINHLGHSGYLNTVTV-SPDG 685
H DWV+ + +VSC D TVK W L++ HS Y+ + V + +
Sbjct: 83 HVDWVNDAALA---GESTLVSCSSDTTVKTWDGLSDGVCTRTLRQHSDYVTCLAVAAKNN 139
Query: 686 SLCASGGKDMKAMLWDL 736
++ ASGG + +WD+
Sbjct: 140 NVVASGGLGGEVFIWDI 156
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 393 DVLSVAFSVDNRQIVSGSRDKTIKLW 470
DVL + S D + +GSRD T+K W
Sbjct: 42 DVLKSSVSNDQSYLFTGSRDGTLKRW 67
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 55.6 bits (128), Expect = 4e-08
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFS- 416
K F HS +I V + Y LS S D ++LWD G T+ FE H+ V+ V F+
Sbjct: 93 KVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFEGHSHYVMQVTFNP 152
Query: 417 VDNRQIVSGSRDKTIKLWNT-LAECKYTIQDEDTAIGC 527
D S S D+TIK+WN + +T+ + C
Sbjct: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNC 190
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Frame = +3
Query: 240 SKAFIGHSHFISDVVLS-SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 416
++ F GHSH++ V + D N S S D+T+++W+L + + H K V V +
Sbjct: 135 TQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYF 194
Query: 417 V--DNRQIVSGSRDKTIKLWN-TLAECKYTIQ 503
D +++GS D T K+W+ C T++
Sbjct: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLE 226
Score = 48.8 bits (111), Expect = 5e-06
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +3
Query: 276 DVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDK 455
D D Y ++GS D T ++WD + E HT +V +V F + I++GS D
Sbjct: 192 DYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDG 251
Query: 456 TIKLWN 473
T+++W+
Sbjct: 252 TVRIWH 257
Score = 39.9 bits (89), Expect = 0.002
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVT--VSPD 682
GHS +V V F+P N S DRT+K+W+L + H +N V D
Sbjct: 140 GHSHYVMQVTFNPKDTNTF-ASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGD 198
Query: 683 GSLCASGGKDMKAMLWDLNDGKHLHTL 763
+G D A +WD + TL
Sbjct: 199 KPYLITGSDDHTAKVWDYQTKSCVQTL 225
Score = 35.9 bits (79), Expect = 0.035
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +1
Query: 112 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNY 231
GH+ +V Q+ NPK + S+S D+T+ +W L + N+
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF 179
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/73 (23%), Positives = 30/73 (41%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL 691
H V+CV + P +++ D T KVW GH+ ++ V P+ +
Sbjct: 184 HQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI 243
Query: 692 CASGGKDMKAMLW 730
+G +D +W
Sbjct: 244 IITGSEDGTVRIW 256
Score = 33.9 bits (74), Expect = 0.14
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLK 628
GH+ VS V F P PII++ D TV++WH T +L+
Sbjct: 227 GHTHNVSAVCFHPEL--PIIITGSEDGTVRIWHATTYRLE 264
Score = 33.5 bits (73), Expect = 0.19
Identities = 17/69 (24%), Positives = 33/69 (47%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
GH+H +S V + ++GS D T+R+W + + V ++ + +R++
Sbjct: 227 GHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRV 286
Query: 435 VSGSRDKTI 461
V G + TI
Sbjct: 287 VIGYDEGTI 295
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +2
Query: 566 IVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 742
+V+ D ++V++ T K+K+ HS Y+ V V P S DM LWD
Sbjct: 72 VVAGADDMYIRVYNYNTMDKVKVFE-AHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEK 130
Query: 743 G 745
G
Sbjct: 131 G 131
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 55.6 bits (128), Expect = 4e-08
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Frame = +2
Query: 488 QVYHPR*GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNC-KLKINHLGHSGYLNT 664
++ H GH+ VS +RF P + +++S G D VK+W + N K ++GH+ +
Sbjct: 273 RLVHTWSGHTKGVSAIRFFPKQGH-LLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRD 331
Query: 665 VTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLTT 769
+ S DGS + G D WD G+ + T +T
Sbjct: 332 ICFSNDGSKFLTAGYDKNIKYWDTETGQVISTFST 366
Score = 48.4 bits (110), Expect = 6e-06
Identities = 19/57 (33%), Positives = 35/57 (61%)
Frame = +3
Query: 300 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 470
N L+G DK + WD+ G+ T+ ++ H V ++ F +NR+ V+ S DK++++W
Sbjct: 383 NILLAGMSDKKIVQWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVW 439
Score = 48.0 bits (109), Expect = 8e-06
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +3
Query: 255 GHSHFISDV-VLSSDGNYALSGSWDKTLRLWDLA-AGKTTRRFEDHTKDVLSVAFSVDNR 428
GH+ +S + G+ LS D +++WD+ +GK R + H K V + FS D
Sbjct: 280 GHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGS 339
Query: 429 QIVSGSRDKTIKLWNT 476
+ ++ DK IK W+T
Sbjct: 340 KFLTAGYDKNIKYWDT 355
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 422
+ ++GH+ + D+ S+DG+ L+ +DK ++ WD G+ F + D
Sbjct: 320 RTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDD 379
Query: 423 NRQ--IVSGSRDKTIKLWN 473
++Q +++G DK I W+
Sbjct: 380 DKQNILLAGMSDKKIVQWD 398
Score = 33.5 bits (73), Expect = 0.19
Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 3/108 (2%)
Frame = +3
Query: 159 GHDLIFLSRQNSHRVEADQRRKQLRYTSKAFIGH--SHFISDVVLSSDGNYALSGSWDKT 332
G+ L S N + + + R QL K F GH + + V S DG + +SG +
Sbjct: 467 GNWLAAQSLDNQILIYSTRERFQLN-KKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGK 525
Query: 333 LRLWDLAAGKTTRRFEDHTKDVLSVAF-SVDNRQIVSGSRDKTIKLWN 473
WD + K R + H + + ++ ++ + D IK W+
Sbjct: 526 CWFWDWKSCKVFRTLKCHNGVCIGAEWHPLEQSKVATCGWDGLIKYWD 573
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +2
Query: 641 GH--SGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 763
GH +GY V SPDG SG + K WD K TL
Sbjct: 498 GHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTL 540
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 55.2 bits (127), Expect = 5e-08
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFS- 416
K F HS +I V + Y LS S D ++LWD G T+ FE H+ V+ V F+
Sbjct: 93 KVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNP 152
Query: 417 VDNRQIVSGSRDKTIKLWNT-LAECKYTIQDEDTAIGC 527
D S S D+TIK+WN + +T+ + C
Sbjct: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNC 190
Score = 51.2 bits (117), Expect = 9e-07
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Frame = +3
Query: 240 SKAFIGHSHFISDVVLS-SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 416
++ F GHSH++ VV + D N S S D+T+++W+L + + H K V V +
Sbjct: 135 TQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYF 194
Query: 417 V--DNRQIVSGSRDKTIKLWN 473
D +++GS D T K+W+
Sbjct: 195 TGGDKPYLITGSDDHTAKVWD 215
Score = 47.6 bits (108), Expect = 1e-05
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = +3
Query: 276 DVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDK 455
D D Y ++GS D T ++WD + + HT +V +V F + I++GS D
Sbjct: 192 DYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDG 251
Query: 456 TIKLWN 473
T+++W+
Sbjct: 252 TVRIWH 257
Score = 39.1 bits (87), Expect = 0.004
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVT--VSPD 682
GHS +V V F+P N S DRT+K+W+L + H +N V D
Sbjct: 140 GHSHYVMQVVFNPKDTNTF-ASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGD 198
Query: 683 GSLCASGGKDMKAMLWDLNDGKHLHTL 763
+G D A +WD + TL
Sbjct: 199 KPYLITGSDDHTAKVWDYQTKSCVQTL 225
Score = 35.9 bits (79), Expect = 0.035
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +1
Query: 112 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNY 231
GH+ +V Q+ NPK + S+S D+T+ +W L + N+
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF 179
Score = 34.3 bits (75), Expect = 0.11
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 14/114 (12%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLK------INHLGHSGYLNT-- 664
GH+ VS V F P PII++ D TV++WH T +L+ + + GY+ +
Sbjct: 227 GHTHNVSAVCFHPEL--PIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSR 284
Query: 665 -VTVSPD-GSLCASGGKDMKAMLWDLND----GKHLHTLTTMISSLPCASQPTD 808
V + D G++ G+++ D + KH T I S+ + TD
Sbjct: 285 RVVIGYDEGTIMVKLGREIPVASMDSSGKIIWAKHNEIQTANIKSIGAGYEATD 338
Score = 33.9 bits (74), Expect = 0.14
Identities = 17/73 (23%), Positives = 30/73 (41%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL 691
H V+CV + P +++ D T KVW GH+ ++ V P+ +
Sbjct: 184 HQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPI 243
Query: 692 CASGGKDMKAMLW 730
+G +D +W
Sbjct: 244 IITGSEDGTVRIW 256
Score = 33.5 bits (73), Expect = 0.19
Identities = 17/69 (24%), Positives = 33/69 (47%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
GH+H +S V + ++GS D T+R+W + + V ++ + +R++
Sbjct: 227 GHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRV 286
Query: 435 VSGSRDKTI 461
V G + TI
Sbjct: 287 VIGYDEGTI 295
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 566 IVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 742
+V+ D ++V++ T K+K+ HS Y+ V V P S DM LWD +
Sbjct: 72 VVAGADDMYIRVYNYNTMDKVKVFE-AHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEN 130
Query: 743 G 745
G
Sbjct: 131 G 131
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 55.2 bits (127), Expect = 5e-08
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFS- 416
K F HS +I V + Y LS S D ++LWD G T+ FE H+ V+ V F+
Sbjct: 93 KVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNP 152
Query: 417 VDNRQIVSGSRDKTIKLWNT-LAECKYTIQDEDTAIGC 527
D S S D+TIK+WN + +T+ + C
Sbjct: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNC 190
Score = 51.2 bits (117), Expect = 9e-07
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Frame = +3
Query: 240 SKAFIGHSHFISDVVLS-SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 416
++ F GHSH++ VV + D N S S D+T+++W+L + + H K V V +
Sbjct: 135 TQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYF 194
Query: 417 V--DNRQIVSGSRDKTIKLWN 473
D +++GS D T K+W+
Sbjct: 195 TGGDKPYLITGSDDHTAKVWD 215
Score = 47.6 bits (108), Expect = 1e-05
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = +3
Query: 276 DVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDK 455
D D Y ++GS D T ++WD + + HT +V +V F + I++GS D
Sbjct: 192 DYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDG 251
Query: 456 TIKLWN 473
T+++W+
Sbjct: 252 TVRIWH 257
Score = 39.1 bits (87), Expect = 0.004
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVT--VSPD 682
GHS +V V F+P N S DRT+K+W+L + H +N V D
Sbjct: 140 GHSHYVMQVVFNPKDTNTF-ASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGD 198
Query: 683 GSLCASGGKDMKAMLWDLNDGKHLHTL 763
+G D A +WD + TL
Sbjct: 199 KPYLITGSDDHTAKVWDYQTKSCVQTL 225
Score = 35.9 bits (79), Expect = 0.035
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +1
Query: 112 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNY 231
GH+ +V Q+ NPK + S+S D+T+ +W L + N+
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF 179
Score = 34.3 bits (75), Expect = 0.11
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 14/114 (12%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLK------INHLGHSGYLNT-- 664
GH+ VS V F P PII++ D TV++WH T +L+ + + GY+ +
Sbjct: 227 GHTHNVSAVCFHPEL--PIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSR 284
Query: 665 -VTVSPD-GSLCASGGKDMKAMLWDLND----GKHLHTLTTMISSLPCASQPTD 808
V + D G++ G+++ D + KH T I S+ + TD
Sbjct: 285 RVVIGYDEGTIMVKLGREIPVASMDSSGKIIWAKHNEIQTANIKSIGAGYEATD 338
Score = 33.9 bits (74), Expect = 0.14
Identities = 17/73 (23%), Positives = 30/73 (41%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL 691
H V+CV + P +++ D T KVW GH+ ++ V P+ +
Sbjct: 184 HQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPI 243
Query: 692 CASGGKDMKAMLW 730
+G +D +W
Sbjct: 244 IITGSEDGTVRIW 256
Score = 33.5 bits (73), Expect = 0.19
Identities = 17/69 (24%), Positives = 33/69 (47%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
GH+H +S V + ++GS D T+R+W + + V ++ + +R++
Sbjct: 227 GHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRV 286
Query: 435 VSGSRDKTI 461
V G + TI
Sbjct: 287 VIGYDEGTI 295
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 566 IVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 742
+V+ D ++V++ T K+K+ HS Y+ V V P S DM LWD +
Sbjct: 72 VVAGADDMYIRVYNYNTMDKVKVFE-AHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEN 130
Query: 743 G 745
G
Sbjct: 131 G 131
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 55.2 bits (127), Expect = 5e-08
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFS- 416
K F HS +I V + Y LS S D ++LWD G T+ FE H+ V+ V F+
Sbjct: 93 KVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNP 152
Query: 417 VDNRQIVSGSRDKTIKLWNT-LAECKYTIQDEDTAIGC 527
D S S D+TIK+WN + +T+ + C
Sbjct: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNC 190
Score = 51.2 bits (117), Expect = 9e-07
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Frame = +3
Query: 240 SKAFIGHSHFISDVVLS-SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 416
++ F GHSH++ VV + D N S S D+T+++W+L + + H K V V +
Sbjct: 135 TQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYF 194
Query: 417 V--DNRQIVSGSRDKTIKLWN 473
D +++GS D T K+W+
Sbjct: 195 TGGDKPYLITGSDDHTAKVWD 215
Score = 47.6 bits (108), Expect = 1e-05
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = +3
Query: 276 DVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDK 455
D D Y ++GS D T ++WD + + HT +V +V F + I++GS D
Sbjct: 192 DYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDG 251
Query: 456 TIKLWN 473
T+++W+
Sbjct: 252 TVRIWH 257
Score = 39.1 bits (87), Expect = 0.004
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVT--VSPD 682
GHS +V V F+P N S DRT+K+W+L + H +N V D
Sbjct: 140 GHSHYVMQVVFNPKDTNTF-ASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGD 198
Query: 683 GSLCASGGKDMKAMLWDLNDGKHLHTL 763
+G D A +WD + TL
Sbjct: 199 KPYLITGSDDHTAKVWDYQTKSCVQTL 225
Score = 35.9 bits (79), Expect = 0.035
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +1
Query: 112 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNY 231
GH+ +V Q+ NPK + S+S D+T+ +W L + N+
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF 179
Score = 34.3 bits (75), Expect = 0.11
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 14/114 (12%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLK------INHLGHSGYLNT-- 664
GH+ VS V F P PII++ D TV++WH T +L+ + + GY+ +
Sbjct: 227 GHTHNVSAVCFHPEL--PIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSR 284
Query: 665 -VTVSPD-GSLCASGGKDMKAMLWDLND----GKHLHTLTTMISSLPCASQPTD 808
V + D G++ G+++ D + KH T I S+ + TD
Sbjct: 285 RVVIGYDEGTIMVKLGREIPVASMDSSGKIIWAKHNEIQTANIKSIGAGYEATD 338
Score = 33.9 bits (74), Expect = 0.14
Identities = 17/73 (23%), Positives = 30/73 (41%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL 691
H V+CV + P +++ D T KVW GH+ ++ V P+ +
Sbjct: 184 HQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPI 243
Query: 692 CASGGKDMKAMLW 730
+G +D +W
Sbjct: 244 IITGSEDGTVRIW 256
Score = 33.5 bits (73), Expect = 0.19
Identities = 17/69 (24%), Positives = 33/69 (47%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
GH+H +S V + ++GS D T+R+W + + V ++ + +R++
Sbjct: 227 GHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRV 286
Query: 435 VSGSRDKTI 461
V G + TI
Sbjct: 287 VIGYDEGTI 295
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 566 IVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 742
+V+ D ++V++ T K+K+ HS Y+ V V P S DM LWD +
Sbjct: 72 VVAGADDMYIRVYNYNTMDKVKVFE-AHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEN 130
Query: 743 G 745
G
Sbjct: 131 G 131
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 54.8 bits (126), Expect = 7e-08
Identities = 25/80 (31%), Positives = 41/80 (51%)
Frame = +3
Query: 231 RYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 410
R+ +++ H +S + LS DG S SWD+TL++W K F + D ++
Sbjct: 155 RHKKASWVHHVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAV 214
Query: 411 FSVDNRQIVSGSRDKTIKLW 470
+N I +GS D+ IK+W
Sbjct: 215 ALSENGDIYTGSSDQRIKVW 234
Score = 41.1 bits (92), Expect = 0.001
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCK-LKINHLGHSGYLNTVTVSPDGS 688
H D VS + S + ++ S WDRT+K+W T+ K L+ H +N V +S +G
Sbjct: 164 HVDAVSGLALSRD--GTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENGD 221
Query: 689 LCASGGKDMKAMLWDLN 739
+ +G D + +W N
Sbjct: 222 I-YTGSSDQRIKVWRKN 237
Score = 36.7 bits (81), Expect = 0.020
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Frame = +3
Query: 201 VEADQRRKQLRYTSKAFIG-HSHFISDVVLS-SDGNYALSGSWDKTLRLWDLAAGK---T 365
+ + +K+ +++ A + H+ I+ + LS ++G+ SG D ++ +W+ G
Sbjct: 238 INEENVKKKRKHSLVAILSEHNSGINALALSGTNGSLLHSGGSDGSILVWERDDGGDIVV 297
Query: 366 TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 485
HT+ VL +A D + SGS DKT++LW A+
Sbjct: 298 VGMLRGHTESVLCLAVVSDI--LCSGSADKTVRLWKCSAK 335
Score = 33.9 bits (74), Expect = 0.14
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 11/89 (12%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLT----NCKLKINHL------GHSGYLN 661
H D ++ V S N I + D+ +KVW N K K H H+ +N
Sbjct: 207 HDDAINAVALSENGD---IYTGSSDQRIKVWRKNINEENVKKKRKHSLVAILSEHNSGIN 263
Query: 662 TVTVS-PDGSLCASGGKDMKAMLWDLNDG 745
+ +S +GSL SGG D ++W+ +DG
Sbjct: 264 ALALSGTNGSLLHSGGSDGSILVWERDDG 292
Score = 30.7 bits (66), Expect = 1.3
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG--KTTRRFEDHTKDV--LSVAFSVD 422
GH+ + + + SD SGS DKT+RLW +A E H V L+ AF D
Sbjct: 303 GHTESVLCLAVVSD--ILCSGSADKTVRLWKCSAKDYSCLAMLEGHLGPVKCLTGAFR-D 359
Query: 423 NRQ-------IVSGSRDKTIKLWNTL 479
+R+ I SG D +K+W L
Sbjct: 360 SRKADEASYHIYSGGLDSQVKVWQVL 385
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 54.8 bits (126), Expect = 7e-08
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ- 431
GH + I D+ +SDG+ +S S DKT+R WD+ GK ++ +H+ V S +
Sbjct: 94 GHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPL 153
Query: 432 IVSGSRDKTIKLWN 473
I+SGS D T KLW+
Sbjct: 154 IISGSDDGTAKLWD 167
Score = 49.2 bits (112), Expect = 4e-06
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 8/82 (9%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDL----AAGKTTRRFEDH----TKDVLSVA 410
GH I+ + LS DG+Y L+ D L +WD+ + + FE H K++L +
Sbjct: 220 GHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCS 279
Query: 411 FSVDNRQIVSGSRDKTIKLWNT 476
+S D ++ +GS D+ + +W+T
Sbjct: 280 WSPDGTKVTAGSSDRMVHIWDT 301
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/71 (33%), Positives = 36/71 (50%)
Frame = +2
Query: 524 VSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 703
++ V FS A I + G D VKVW L + + GH + +++SPDGS +
Sbjct: 183 ITAVSFSD--AADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTN 240
Query: 704 GKDMKAMLWDL 736
G D K +WD+
Sbjct: 241 GMDNKLCVWDM 251
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFSVDNRQ 431
GH + + + G SGS D+ + LW + K + H +L + ++ D Q
Sbjct: 51 GHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQ 110
Query: 432 IVSGSRDKTIKLWN 473
IVS S DKT++ W+
Sbjct: 111 IVSASPDKTVRAWD 124
Score = 40.7 bits (91), Expect = 0.001
Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLT-NCKLKINHLGHSGYLNTVTVSPDG 685
GH V ++F+P A +I S DR + +W + +CK + GH + + + DG
Sbjct: 51 GHPSAVYTMKFNP--AGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDG 108
Query: 686 SLCASGGKDMKAMLWDLNDGKHLHTLTTMISSLPCASQPTDTGYVLL 826
S S D WD+ GK + + SS + PT G L+
Sbjct: 109 SQIVSASPDKTVRAWDVETGKQIKKMAEH-SSFVNSCCPTRRGPPLI 154
Score = 40.7 bits (91), Expect = 0.001
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGN-YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 419
K HS F++ + G +SGS D T +LWD+ + F D + + +V+FS
Sbjct: 132 KKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSD 190
Query: 420 DNRQIVSGSRDKTIKLWN-TLAECKYTIQ-DEDTAIGCHVS 536
+I +G D +K+W+ E T++ +DT G +S
Sbjct: 191 AADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLS 231
Score = 39.9 bits (89), Expect = 0.002
Identities = 30/119 (25%), Positives = 49/119 (41%), Gaps = 1/119 (0%)
Frame = +2
Query: 512 HSDWV-SCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
HS +V SC P+I+S D T K+W + + I + V+ S
Sbjct: 137 HSSFVNSCC--PTRRGPPLIISGSDDGTAKLWDMRQ-RGAIQTFPDKYQITAVSFSDAAD 193
Query: 689 LCASGGKDMKAMLWDLNDGKHLHTLTTMISSLPCASQPTDTGYVLLSDLPSRSGIWKAR 865
+GG D +WDL G+ TL ++ S D Y+L + + ++ +W R
Sbjct: 194 KIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMR 252
Score = 39.9 bits (89), Expect = 0.002
Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Frame = +3
Query: 243 KAFIGHSHFISDVVL----SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 410
K F GH H +L S DG +GS D+ + +WD + +T + HT V
Sbjct: 262 KIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECV 321
Query: 411 FSVDNRQIVSGSRDKTIKL 467
F I S S DK I L
Sbjct: 322 FHPTEPIIGSCSSDKNIYL 340
Score = 38.7 bits (86), Expect = 0.005
Identities = 16/68 (23%), Positives = 32/68 (47%)
Frame = +3
Query: 270 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 449
I+ V S + +G D +++WDL G+ T E H + ++ S D +++
Sbjct: 183 ITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGM 242
Query: 450 DKTIKLWN 473
D + +W+
Sbjct: 243 DNKLCVWD 250
Score = 34.7 bits (76), Expect = 0.082
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +2
Query: 566 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDG-SLCASGGKDMKAMLWDLND 742
IVS D+TV+ W + K HS ++N+ + G L SG D A LWD+
Sbjct: 111 IVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQ 170
Query: 743 GKHLHT 760
+ T
Sbjct: 171 RGAIQT 176
Score = 31.9 bits (69), Expect = 0.58
Identities = 25/109 (22%), Positives = 45/109 (41%), Gaps = 9/109 (8%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL------TNCKLKINHLGHSGYLNTVT 670
GH D ++ + SP+ + +++ G D + VW + C H+ N +
Sbjct: 220 GHQDTITGMSLSPDGS--YLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLK 277
Query: 671 VS--PDGSLCASGGKDMKAMLWDLNDGKHLHTLTTMISSL-PCASQPTD 808
S PDG+ +G D +WD + ++ L S+ C PT+
Sbjct: 278 CSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTE 326
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 384 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 491
H V ++ F+ I SGS D+ I LW +CK
Sbjct: 52 HPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCK 87
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 54.0 bits (124), Expect = 1e-07
Identities = 23/72 (31%), Positives = 38/72 (52%)
Frame = +3
Query: 258 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 437
HS + +SSDG Y +G D+ + +WD+ + + F H V + F ++
Sbjct: 221 HSRESLALAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSELY 280
Query: 438 SGSRDKTIKLWN 473
SGS D+T+K+WN
Sbjct: 281 SGSFDRTVKVWN 292
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 19/93 (20%)
Frame = +3
Query: 252 IGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR-------------------R 374
+ H + V LS D + S S D T+ WD+++GKT + R
Sbjct: 158 VKHRRSVVSVALSDDDSRGFSASKDGTIMHWDVSSGKTDKYIWPSDEILKSHGMKLREPR 217
Query: 375 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
++H+++ L++A S D R + +G D+ + +W+
Sbjct: 218 NKNHSRESLALAVSSDGRYLATGGVDRHVHIWD 250
Score = 34.3 bits (75), Expect = 0.11
Identities = 23/66 (34%), Positives = 34/66 (51%)
Frame = +2
Query: 455 DYQTLEHPCGVQVYHPR*GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKIN 634
D +T EH VQ + GH + VSC+ F + + S +DRTVKVW++ +
Sbjct: 250 DVRTREH---VQAFP---GHRNTVSCLCF--RYGTSELYSGSFDRTVKVWNVEDKAFITE 301
Query: 635 HLGHSG 652
+ GH G
Sbjct: 302 NHGHQG 307
Score = 33.1 bits (72), Expect = 0.25
Identities = 18/73 (24%), Positives = 37/73 (50%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 422
+AF GH + +S + + SGS+D+T+++W++ H ++L++
Sbjct: 258 QAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKVWNVEDKAFITENHGHQGEILAIDALRK 317
Query: 423 NRQIVSGSRDKTI 461
R + G RD+T+
Sbjct: 318 ERALTVG-RDRTM 329
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +2
Query: 644 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLTTMISSLPC 790
HS + VS DG A+GG D +WD+ +H+ +++ C
Sbjct: 221 HSRESLALAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSC 269
Score = 29.1 bits (62), Expect = 4.1
Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Frame = +3
Query: 210 DQRRKQLRYTSKAFIGHSHFISDVVLSSDG---NYALSGSWDKTLRLWDLAAGKTTRRFE 380
D+ K KAFI +H +L+ D AL+ D+T+ L+ T +
Sbjct: 285 DRTVKVWNVEDKAFITENHGHQGEILAIDALRKERALTVGRDRTM-LYHKVPESTRMIYR 343
Query: 381 DHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL 479
+ S F DN + +SGS + T+ LW L
Sbjct: 344 APASSLESCCFISDN-EYLSGSDNGTVALWGML 375
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 53.6 bits (123), Expect = 2e-07
Identities = 24/54 (44%), Positives = 33/54 (61%)
Frame = +3
Query: 312 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
S S+D T++LWD GK F H + V S+AFS + I SGS DK+I +W+
Sbjct: 516 SASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWS 569
Score = 46.4 bits (105), Expect = 3e-05
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Frame = +2
Query: 512 HSDWVSCVRFSP-----NHANP--IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVT 670
H+ + +R+SP N+ N + S +D TVK+W K+ + GH + ++
Sbjct: 489 HTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLA 548
Query: 671 VSPDGSLCASGGKDMKAMLWDLNDGKHLHTLT 766
SP+G ASG D +W + +GK + T T
Sbjct: 549 FSPNGEYIASGSLDKSIHIWSIKEGKIVKTYT 580
Score = 41.5 bits (93), Expect = 7e-04
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Frame = +3
Query: 240 SKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 419
+K F GH ++ V G+ S S D T ++W++ +HTK++ ++ +S
Sbjct: 441 AKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSP 500
Query: 420 -------DNRQ--IVSGSRDKTIKLWN 473
N+Q + S S D T+KLW+
Sbjct: 501 TGPGTNNPNKQLTLASASFDSTVKLWD 527
Score = 39.1 bits (87), Expect = 0.004
Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 9/91 (9%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GH V+CV++ P + ++ SC D T K+W++ + H+ + T+ SP G
Sbjct: 446 GHQGEVNCVKWDPTGS--LLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGP 503
Query: 689 ---------LCASGGKDMKAMLWDLNDGKHL 754
AS D LWD GK L
Sbjct: 504 GTNNPNKQLTLASASFDSTVKLWDAELGKML 534
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/72 (23%), Positives = 36/72 (50%)
Frame = +3
Query: 246 AFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN 425
+F GH + + S +G Y SGS DK++ +W + GK + + + + V ++ +
Sbjct: 536 SFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVKTYTGN-GGIFEVCWNKEG 594
Query: 426 RQIVSGSRDKTI 461
+I + D ++
Sbjct: 595 NKIAACFADNSV 606
Score = 37.5 bits (83), Expect = 0.012
Identities = 22/70 (31%), Positives = 36/70 (51%)
Frame = +3
Query: 258 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 437
H I + + G+Y L+GS D+T +WD+ A + ++FE H+ L V + +N
Sbjct: 364 HKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWR-NNVSFA 422
Query: 438 SGSRDKTIKL 467
+ S D I L
Sbjct: 423 TSSTDSMIYL 432
Score = 36.7 bits (81), Expect = 0.020
Identities = 24/82 (29%), Positives = 35/82 (42%)
Frame = +2
Query: 518 DWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCA 697
DW + V F+ + + +I C K+ K GH G +N V P GSL A
Sbjct: 414 DWRNNVSFATSSTDSMIYLC------KIGETRPAK---TFTGHQGEVNCVKWDPTGSLLA 464
Query: 698 SGGKDMKAMLWDLNDGKHLHTL 763
S D A +W++ +H L
Sbjct: 465 SCSDDSTAKIWNIKQSTFVHDL 486
Score = 34.7 bits (76), Expect = 0.082
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +2
Query: 590 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG--KHLHT 760
T + H+ N ++I GH+ + SP SL ASG D A +W + +G K +HT
Sbjct: 247 TSQTSHIPNSDVRILE-GHTSEVCACAWSPSASLLASGSGDATARIWSIPEGSFKAVHT 304
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/66 (25%), Positives = 32/66 (48%)
Frame = +3
Query: 288 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 467
+ +G +GS D R+W L G+ H + S+ ++ +++GS D+T +
Sbjct: 333 NGEGTLLATGSCDGQARIWTLN-GELISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVV 391
Query: 468 WNTLAE 485
W+ AE
Sbjct: 392 WDVKAE 397
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 369 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
R E HT +V + A+S + SGS D T ++W+
Sbjct: 259 RILEGHTSEVCACAWSPSASLLASGSGDATARIWS 293
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1
Query: 91 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDE 222
+L TL H G + + N K D +L+ S D+T +VW + +E
Sbjct: 356 ELISTLSKHKGPIFSLKWNKK-GDYLLTGSVDRTAVVWDVKAEE 398
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 53.6 bits (123), Expect = 2e-07
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +3
Query: 246 AFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VD 422
+F+GH + D+ S + LS S DKT+RLWDL++ KT + H+ V + F+ VD
Sbjct: 463 SFVGHLDDVLDLSWSKS-QHLLSSSMDKTVRLWDLSS-KTCLKVFSHSDYVTCIQFNPVD 520
Query: 423 NRQIVSGSRDKTIKLWN 473
+ +SGS D +++W+
Sbjct: 521 DNYFISGSLDAKVRIWS 537
Score = 38.3 bits (85), Expect = 0.007
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DG 685
GH D V + +S + ++S D+TV++W L++ K + HS Y+ + +P D
Sbjct: 466 GHLDDVLDLSWSKSQH---LLSSSMDKTVRLWDLSS-KTCLKVFSHSDYVTCIQFNPVDD 521
Query: 686 SLCASGGKDMKAMLWDLND 742
+ SG D K +W + D
Sbjct: 522 NYFISGSLDAKVRIWSIPD 540
Score = 34.7 bits (76), Expect = 0.082
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 9/115 (7%)
Frame = +3
Query: 159 GH--DLIFLSRQNSHRVEADQRRKQLRY---TSKAFI---GHSHFISDVVLSS-DGNYAL 311
GH D++ LS S + + K +R +SK + HS +++ + + D NY +
Sbjct: 466 GHLDDVLDLSWSKSQHLLSSSMDKTVRLWDLSSKTCLKVFSHSDYVTCIQFNPVDDNYFI 525
Query: 312 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 476
SGS D +R+W + + + D + V + ++ D + + GS T L+NT
Sbjct: 526 SGSLDAKVRIWSIPDHQVV-DWNDLHEMVTAACYTPDGQGALVGSYKGTCCLYNT 579
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/79 (24%), Positives = 38/79 (48%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL 691
HSD+V+C++F+P N +S D V++W + + ++ ++ + +PDG
Sbjct: 507 HSDYVTCIQFNPVDDN-YFISGSLDAKVRIWSIPDHQV-VDWNDLHEMVTAACYTPDGQG 564
Query: 692 CASGGKDMKAMLWDLNDGK 748
G L++ +D K
Sbjct: 565 ALVGSYKGTCCLYNTHDNK 583
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 53.6 bits (123), Expect = 2e-07
Identities = 32/119 (26%), Positives = 49/119 (41%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GH WV V F P+ N + DRT+K+W + LK+ GH + + VS +
Sbjct: 174 GHLGWVRSVAFDPS--NEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHT 231
Query: 689 LCASGGKDMKAMLWDLNDGKHLHTLTTMISSLPCASQPTDTGYVLLSDLPSRSGIWKAR 865
S G D + WDL K + + +S + C + +L S +W R
Sbjct: 232 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIR 290
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
GH ++ V + +GS D+T+++WD+A G H + V +A S + +
Sbjct: 174 GHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYM 233
Query: 435 VSGSRDKTIKLWN 473
S DK +K W+
Sbjct: 234 FSAGDDKQVKCWD 246
Score = 45.2 bits (102), Expect = 6e-05
Identities = 28/106 (26%), Positives = 40/106 (37%), Gaps = 1/106 (0%)
Frame = +3
Query: 246 AFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN 425
A GH + + V ++GS D T++ WDL GKT H K V ++
Sbjct: 297 ALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKE 356
Query: 426 RQIVSGSRDKTIKLWNTLAE-CKYTIQDEDTAIGCHVSDSHPIMPT 560
S S D T K E C + + T I + +M T
Sbjct: 357 NAFASASADNTKKFSLPKGEFCHNMLSQQKTIINAMAVNEDGVMVT 402
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
GH + + +S+ Y S DK ++ WDL K R + H V +A +
Sbjct: 216 GHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVL 275
Query: 435 VSGSRDKTIKLWNTLAECK-YTIQDEDTAIGCHV 533
++G RD ++W+ + + + + D + C V
Sbjct: 276 LTGGRDSVCRVWDIRTKMQIFALSGHDNTV-CSV 308
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/77 (28%), Positives = 35/77 (45%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 422
+++ GH + + L + L+G D R+WD+ H V SV
Sbjct: 254 RSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPT 313
Query: 423 NRQIVSGSRDKTIKLWN 473
+ Q+V+GS D TIK W+
Sbjct: 314 DPQVVTGSHDTTIKFWD 330
Score = 41.5 bits (93), Expect = 7e-04
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Frame = +2
Query: 467 LEHPCGVQVYHPR*GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHL-G 643
LE ++ YH GH V C+ P ++++ G D +VW + K++I L G
Sbjct: 247 LEQNKVIRSYH---GHLSGVYCLALHPTL--DVLLTGGRDSVCRVWDIRT-KMQIFALSG 300
Query: 644 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLT 766
H + +V P +G D WDL GK + TLT
Sbjct: 301 HDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLT 341
Score = 39.5 bits (88), Expect = 0.003
Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GH + V + S H + S G D+ VK W L K+ ++ GH + + + P
Sbjct: 216 GHIEQVRGLAVSNRHT--YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLD 273
Query: 689 LCASGGKDMKAMLWDLNDGKHLHTLTTMISSLPCA--SQPTD 808
+ +GG+D +WD+ + L+ +++ C+ ++PTD
Sbjct: 274 VLLTGGRDSVCRVWDIRTKMQIFALSGHDNTV-CSVFTRPTD 314
Score = 35.5 bits (78), Expect = 0.047
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +3
Query: 351 AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDE-DTAIG 524
A K R + H V SVAF N +GS D+TIK+W+ K T+ + G
Sbjct: 164 APWKNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRG 223
Query: 525 CHVSDSHPIM 554
VS+ H M
Sbjct: 224 LAVSNRHTYM 233
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/105 (22%), Positives = 42/105 (40%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GH + V V P +P +V+ D T+K W L K H + +T+ P +
Sbjct: 300 GHDNTVCSVFTRPT--DPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKEN 357
Query: 689 LCASGGKDMKAMLWDLNDGKHLHTLTTMISSLPCASQPTDTGYVL 823
AS D + L G+ H + + ++ A + G ++
Sbjct: 358 AFASASAD-NTKKFSLPKGEFCHNMLSQQKTIINAMAVNEDGVMV 401
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 204
++GH GWV +A +P + + S D+T+ +W
Sbjct: 172 IQGHLGWVRSVAFDPS-NEWFCTGSADRTIKIW 203
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 53.2 bits (122), Expect = 2e-07
Identities = 21/70 (30%), Positives = 42/70 (60%)
Frame = +3
Query: 270 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 449
I + +++G Y + G + LW++A GK +++ H + V + FS D+ +VSGS+
Sbjct: 81 IKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQ 140
Query: 450 DKTIKLWNTL 479
D +I++W+ +
Sbjct: 141 DGSIRVWSLI 150
Score = 41.9 bits (94), Expect = 5e-04
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 13/90 (14%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL---------AAGKT--TRRFEDHT 389
K + GH ++ +V S D + +SGS D ++R+W L G T F +HT
Sbjct: 114 KKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHT 173
Query: 390 KDVLSVAFSVD--NRQIVSGSRDKTIKLWN 473
V + N I+S S D+T K+W+
Sbjct: 174 MSVTDIVIDYGGCNAVIISSSEDRTCKVWS 203
Score = 39.9 bits (89), Expect = 0.002
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Frame = +2
Query: 437 VWFSRQDYQTLEHPCGVQVY-HPR*GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLT 613
VW + + + G +Y H H+ V+ + N +I+S DRT KVW L+
Sbjct: 146 VWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDIVIDYGGCNAVIISSSEDRTCKVWSLS 205
Query: 614 NCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 739
KL + ++ +N + + P G + +G +D K + +N
Sbjct: 206 RGKL-LKNIIFPSVINALALDPGGCVFYAGARDSKIYIGAIN 246
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/63 (26%), Positives = 26/63 (41%)
Frame = +2
Query: 548 NHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 727
N+ +V G + +W + KL GH + + S D SL SG +D +
Sbjct: 87 NNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRV 146
Query: 728 WDL 736
W L
Sbjct: 147 WSL 149
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +3
Query: 249 FIGHSHFISDVVLSSDGNYA--LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 422
F H+ ++D+V+ G A +S S D+T ++W L+ GK + + ++A
Sbjct: 169 FNEHTMSVTDIVIDYGGCNAVIISSSEDRTCKVWSLSRGKLLKNI-IFPSVINALALDPG 227
Query: 423 NRQIVSGSRDKTIKLWNTLAECKYTIQ 503
+G+RD I + A +Y Q
Sbjct: 228 GCVFYAGARDSKIYIGAINATSEYGTQ 254
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 52.4 bits (120), Expect = 4e-07
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Frame = +3
Query: 255 GHSHFISDVVLS-SDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDNR 428
GH+ + V +S S+ N+ +SGS D T RLWD AA + R F H DV +V F D
Sbjct: 202 GHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGY 261
Query: 429 QIVSGSRDKTIKLWN 473
+ +GS D T +L++
Sbjct: 262 RFGTGSDDGTCRLYD 276
Score = 49.6 bits (113), Expect = 3e-06
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Frame = +3
Query: 240 SKAFIGHSHFISDV-VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF-----EDHTKDVL 401
S+ GH ++S + ++ + ++ S D+T LWD+ G T F HT DVL
Sbjct: 149 SRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVL 208
Query: 402 SVAFSVDNRQ-IVSGSRDKTIKLWNTLA 482
SV+ S N +SGS D T +LW+T A
Sbjct: 209 SVSISGSNPNWFISGSCDSTARLWDTRA 236
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH----TKDVLSVA 410
+ F GH ++ V DG +GS D T RL+D+ G + ++ H V S+A
Sbjct: 242 RTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIA 301
Query: 411 FSVDNRQIVSG-SRDKTIKLWNTL 479
FSV R + +G + + T +W+TL
Sbjct: 302 FSVSGRLLFAGYASNNTCYVWDTL 325
Score = 39.1 bits (87), Expect = 0.004
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDG 685
GH+ V V S ++ N I S D T ++W + GH G +NTV PDG
Sbjct: 202 GHTADVLSVSISGSNPNWFI-SGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDG 260
Query: 686 SLCASGGKDMKAMLWDLNDGKHL 754
+G D L+D+ G L
Sbjct: 261 YRFGTGSDDGTCRLYDIRTGHQL 283
Score = 38.3 bits (85), Expect = 0.007
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLG---HSGY-LNTVTVS 676
GH +VSC ++ PN +I S G D+T +W +T LK + G SG+ + ++VS
Sbjct: 154 GHRGYVSCCQYVPNEDAHLITSSG-DQTCILWDVTT-GLKTSVFGGEFQSGHTADVLSVS 211
Query: 677 PDGS---LCASGGKDMKAMLWD 733
GS SG D A LWD
Sbjct: 212 ISGSNPNWFISGSCDSTARLWD 233
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 369 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 491
R + HT V S+ ++ + +IVS S+D + +WN L K
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQK 99
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 85 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT 213
T+ + L GH G+V+ P +++SS D+T I+W +T
Sbjct: 145 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVT 187
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/73 (20%), Positives = 33/73 (45%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
GH+ + + + + N +S S D L +W+ + T + V++ AFS + + +
Sbjct: 63 GHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSV 122
Query: 435 VSGSRDKTIKLWN 473
G D +++
Sbjct: 123 ACGGLDSVCSIFS 135
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 52.4 bits (120), Expect = 4e-07
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Frame = +3
Query: 255 GHSHFISDVVLS-SDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDNR 428
GH+ + V +S S+ N+ +SGS D T RLWD AA + R F H DV +V F D
Sbjct: 140 GHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGY 199
Query: 429 QIVSGSRDKTIKLWN 473
+ +GS D T +L++
Sbjct: 200 RFGTGSDDGTCRLYD 214
Score = 49.6 bits (113), Expect = 3e-06
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Frame = +3
Query: 240 SKAFIGHSHFISDV-VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF-----EDHTKDVL 401
S+ GH ++S + ++ + ++ S D+T LWD+ G T F HT DVL
Sbjct: 87 SRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVL 146
Query: 402 SVAFSVDNRQ-IVSGSRDKTIKLWNTLA 482
SV+ S N +SGS D T +LW+T A
Sbjct: 147 SVSISGSNPNWFISGSCDSTARLWDTRA 174
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH----TKDVLSVA 410
+ F GH ++ V DG +GS D T RL+D+ G + ++ H V S+A
Sbjct: 180 RTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIA 239
Query: 411 FSVDNRQIVSG-SRDKTIKLWNTL 479
FSV R + +G + + T +W+TL
Sbjct: 240 FSVSGRLLFAGYASNNTCYVWDTL 263
Score = 39.1 bits (87), Expect = 0.004
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDG 685
GH+ V V S ++ N I S D T ++W + GH G +NTV PDG
Sbjct: 140 GHTADVLSVSISGSNPNWFI-SGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDG 198
Query: 686 SLCASGGKDMKAMLWDLNDGKHL 754
+G D L+D+ G L
Sbjct: 199 YRFGTGSDDGTCRLYDIRTGHQL 221
Score = 38.3 bits (85), Expect = 0.007
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLG---HSGY-LNTVTVS 676
GH +VSC ++ PN +I S G D+T +W +T LK + G SG+ + ++VS
Sbjct: 92 GHRGYVSCCQYVPNEDAHLITSSG-DQTCILWDVTT-GLKTSVFGGEFQSGHTADVLSVS 149
Query: 677 PDGS---LCASGGKDMKAMLWD 733
GS SG D A LWD
Sbjct: 150 ISGSNPNWFISGSCDSTARLWD 171
Score = 33.5 bits (73), Expect = 0.19
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 258 HSHFISDVVLSSDGNYALSGSWDKTLRLW 344
H + IS + LS+DG+ +GSWD L++W
Sbjct: 278 HRNRISCLGLSADGSALCTGSWDSNLKIW 306
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 85 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT 213
T+ + L GH G+V+ P +++SS D+T I+W +T
Sbjct: 83 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVT 125
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 52.4 bits (120), Expect = 4e-07
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Frame = +3
Query: 255 GHSHFISDVVLS-SDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDNR 428
GH+ + V +S S+ N+ +SGS D T RLWD AA + R F H DV +V F D
Sbjct: 202 GHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGY 261
Query: 429 QIVSGSRDKTIKLWN 473
+ +GS D T +L++
Sbjct: 262 RFGTGSDDGTCRLYD 276
Score = 49.6 bits (113), Expect = 3e-06
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Frame = +3
Query: 240 SKAFIGHSHFISDV-VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF-----EDHTKDVL 401
S+ GH ++S + ++ + ++ S D+T LWD+ G T F HT DVL
Sbjct: 149 SRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVL 208
Query: 402 SVAFSVDNRQ-IVSGSRDKTIKLWNTLA 482
SV+ S N +SGS D T +LW+T A
Sbjct: 209 SVSISGSNPNWFISGSCDSTARLWDTRA 236
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH----TKDVLSVA 410
+ F GH ++ V DG +GS D T RL+D+ G + ++ H V S+A
Sbjct: 242 RTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIA 301
Query: 411 FSVDNRQIVSG-SRDKTIKLWNTL 479
FSV R + +G + + T +W+TL
Sbjct: 302 FSVSGRLLFAGYASNNTCYVWDTL 325
Score = 39.1 bits (87), Expect = 0.004
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDG 685
GH+ V V S ++ N I S D T ++W + GH G +NTV PDG
Sbjct: 202 GHTADVLSVSISGSNPNWFI-SGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDG 260
Query: 686 SLCASGGKDMKAMLWDLNDGKHL 754
+G D L+D+ G L
Sbjct: 261 YRFGTGSDDGTCRLYDIRTGHQL 283
Score = 38.3 bits (85), Expect = 0.007
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLG---HSGY-LNTVTVS 676
GH +VSC ++ PN +I S G D+T +W +T LK + G SG+ + ++VS
Sbjct: 154 GHRGYVSCCQYVPNEDAHLITSSG-DQTCILWDVTT-GLKTSVFGGEFQSGHTADVLSVS 211
Query: 677 PDGS---LCASGGKDMKAMLWD 733
GS SG D A LWD
Sbjct: 212 ISGSNPNWFISGSCDSTARLWD 233
Score = 33.5 bits (73), Expect = 0.19
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 258 HSHFISDVVLSSDGNYALSGSWDKTLRLW 344
H + IS + LS+DG+ +GSWD L++W
Sbjct: 340 HRNRISCLGLSADGSALCTGSWDSNLKIW 368
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 369 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 491
R + HT V S+ ++ + +IVS S+D + +WN L K
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQK 99
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 85 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT 213
T+ + L GH G+V+ P +++SS D+T I+W +T
Sbjct: 145 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVT 187
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/73 (20%), Positives = 33/73 (45%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
GH+ + + + + N +S S D L +W+ + T + V++ AFS + + +
Sbjct: 63 GHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSV 122
Query: 435 VSGSRDKTIKLWN 473
G D +++
Sbjct: 123 ACGGLDSVCSIFS 135
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 52.4 bits (120), Expect = 4e-07
Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 5/103 (4%)
Frame = +3
Query: 249 FIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDN 425
F GH I D+ S G Y LS S D+T+RLW + + R F H V VAF+ VD+
Sbjct: 318 FKGHIGEILDLSWSEKG-YLLSSSVDETVRLWRVGCDECLRTF-THNNFVTCVAFNPVDD 375
Query: 426 RQIVSGSRDKTIKLWNTLAECK---YT-IQDEDTAIGCHVSDS 542
+SGS D +++W+ + C+ YT I+D TA+ C+ D+
Sbjct: 376 NYFISGSIDGKVRIWD-VTRCRVVDYTDIRDIVTAV-CYRPDA 416
Score = 33.5 bits (73), Expect = 0.19
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPD 682
H+++V+CV F+P N +S D V++W +T C++ +++ + V PD
Sbjct: 361 HNNFVTCVAFNPVDDN-YFISGSIDGKVRIWDVTRCRV-VDYTDIRDIVTAVCYRPD 415
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 644 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT 760
H G + + SPDG AS G+D +W + + + T
Sbjct: 217 HDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDT 255
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 115 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 216
HN +VT +A NP + +S S D + +W +TR
Sbjct: 361 HNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVTR 394
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 52.4 bits (120), Expect = 4e-07
Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 5/103 (4%)
Frame = +3
Query: 249 FIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDN 425
F GH I D+ S G Y LS S D+T+RLW + + R F H V VAF+ VD+
Sbjct: 318 FKGHIGEILDLSWSEKG-YLLSSSVDETVRLWRVGCDECLRTF-THNNFVTCVAFNPVDD 375
Query: 426 RQIVSGSRDKTIKLWNTLAECK---YT-IQDEDTAIGCHVSDS 542
+SGS D +++W+ + C+ YT I+D TA+ C+ D+
Sbjct: 376 NYFISGSIDGKVRIWD-VTRCRVVDYTDIRDIVTAV-CYRPDA 416
Score = 33.5 bits (73), Expect = 0.19
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPD 682
H+++V+CV F+P N +S D V++W +T C++ +++ + V PD
Sbjct: 361 HNNFVTCVAFNPVDDN-YFISGSIDGKVRIWDVTRCRV-VDYTDIRDIVTAVCYRPD 415
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 644 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT 760
H G + + SPDG AS G+D +W + + + T
Sbjct: 217 HDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDT 255
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 115 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 216
HN +VT +A NP + +S S D + +W +TR
Sbjct: 361 HNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVTR 394
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 52.0 bits (119), Expect = 5e-07
Identities = 24/91 (26%), Positives = 47/91 (51%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 422
K + H + DV ++SD S D+ + WD++ G+ R+F H +V +V F+
Sbjct: 54 KTYKSHGREVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDS 113
Query: 423 NRQIVSGSRDKTIKLWNTLAECKYTIQDEDT 515
+ +VS D+++++W+ + +Q DT
Sbjct: 114 SSVVVSAGFDRSLRVWDCRSHSVEPVQIIDT 144
Score = 49.2 bits (112), Expect = 4e-06
Identities = 22/73 (30%), Positives = 38/73 (52%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
GH + + DGNYAL+ D+T+RLW+ G + ++ H ++V V + DN +
Sbjct: 16 GHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNAKF 75
Query: 435 VSGSRDKTIKLWN 473
S D+ + W+
Sbjct: 76 CSCGGDRQVYYWD 88
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/80 (28%), Positives = 37/80 (46%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GH V RF N ++CG DRT+++W+ L + H + V V+ D +
Sbjct: 16 GHEGAVLAARF--NGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNA 73
Query: 689 LCASGGKDMKAMLWDLNDGK 748
S G D + WD++ G+
Sbjct: 74 KFCSCGGDRQVYYWDVSTGR 93
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +2
Query: 557 NPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 733
N SCG DR V W ++ ++ GH G +N V + S+ S G D +WD
Sbjct: 72 NAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWD 130
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +3
Query: 270 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN--RQIVSG 443
++ + +S+DGN L+G D TLRL D G+ + ++ H + N ++ G
Sbjct: 187 VNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAHVIGG 246
Query: 444 SRDKTIKLWN 473
S D + W+
Sbjct: 247 SEDGLVFFWD 256
Score = 32.7 bits (71), Expect = 0.33
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 604
GH V+ V+F N ++ ++VS G+DR+++VW
Sbjct: 100 GHDGEVNAVKF--NDSSSVVVSAGFDRSLRVW 129
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 91 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 207
K+ R H+ VT ++ +PK D +L+SS D T+ VWK
Sbjct: 261 KVLSKFRAHDLVVTSVSYHPK-EDCMLTSSVDGTIRVWK 298
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 360 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
K + H VL+ F+ D ++ +D+TI+LWN
Sbjct: 9 KEAHILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWN 46
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 52.0 bits (119), Expect = 5e-07
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +3
Query: 249 FIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDN 425
F GH+ + D+ S D NY LS S DKT+RLW + + F H V SV F+ V+
Sbjct: 324 FRGHTGEVLDISWSKD-NYLLSASMDKTVRLWKVGSNDCLGVFA-HNSYVTSVQFNPVNE 381
Query: 426 RQIVSGSRDKTIKLWN 473
+SGS D +++WN
Sbjct: 382 NYFMSGSIDGKVRIWN 397
Score = 32.3 bits (70), Expect = 0.44
Identities = 21/78 (26%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Frame = +3
Query: 258 HSHFISDVVLSS-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS-VAFSVDNRQ 431
H+ +++ V + + NY +SGS D +R+W++ +G + + D KD++S V + D +
Sbjct: 367 HNSYVTSVQFNPVNENYFMSGSIDGKVRIWNI-SGCSVVDWAD-LKDIISAVCYRPDGQG 424
Query: 432 IVSGSRDKTIKLWNTLAE 485
+ GS + + + +N E
Sbjct: 425 GIIGSLNGSCRFFNMSGE 442
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/74 (21%), Positives = 29/74 (39%)
Frame = +3
Query: 177 LSRQNSHRVEADQRRKQLRYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAA 356
+SR + + Y S+ H I + S+DG + S D +R+W +
Sbjct: 193 ISRVKVKHCKKQAKELSALYQSQDIKAHDGAILAMKFSNDGKFLASSGEDGIVRVWKVVE 252
Query: 357 GKTTRRFEDHTKDV 398
K +R D ++
Sbjct: 253 DKKSRLRRDCLNEI 266
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +1
Query: 109 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 210
RGH G V I+ + + +LS+S DKT+ +WK+
Sbjct: 325 RGHTGEVLDISWSKD--NYLLSASMDKTVRLWKV 356
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 52.0 bits (119), Expect = 5e-07
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ- 431
GH + + V + +GN+ L+ S D+ ++L+D+ K + F HTKDV S+A+ + +
Sbjct: 308 GHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEY 367
Query: 432 IVSGSRDKTIKLW 470
VSGS D +I W
Sbjct: 368 FVSGSSDGSICHW 380
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/73 (27%), Positives = 38/73 (52%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
GH + V + +SG D+ ++LWD +G+ H VLSV ++ + +
Sbjct: 266 GHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWL 325
Query: 435 VSGSRDKTIKLWN 473
++ S+D+ IKL++
Sbjct: 326 LTASKDQIIKLYD 338
Score = 37.9 bits (84), Expect = 0.009
Identities = 28/83 (33%), Positives = 35/83 (42%), Gaps = 19/83 (22%)
Frame = +2
Query: 572 SCGWDRTVKVWHLTNCK-------------LKIN------HLGHSGYLNTVTVSPDGSLC 694
SC D TVKVW T C ++I + GH + +V P SL
Sbjct: 224 SCSDDTTVKVWDFTKCVDESSLTGYIGKGVIEIRFGVMPCNAGHGWDVKSVDWHPTKSLL 283
Query: 695 ASGGKDMKAMLWDLNDGKHLHTL 763
SGGKD LWD G+ L +L
Sbjct: 284 VSGGKDQLVKLWDTRSGRELCSL 306
Score = 36.7 bits (81), Expect = 0.020
Identities = 19/72 (26%), Positives = 32/72 (44%)
Frame = +3
Query: 258 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 437
H I +V S + NY +SG TL+ W H + + ++F + +
Sbjct: 164 HDQPIRSMVWSHNENYMVSGDDGGTLKYWQNNMNNVKANKTAHKESIRDLSFCKTDLKFC 223
Query: 438 SGSRDKTIKLWN 473
S S D T+K+W+
Sbjct: 224 SCSDDTTVKVWD 235
Score = 33.5 bits (73), Expect = 0.19
Identities = 22/84 (26%), Positives = 40/84 (47%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GH V V + P + ++VS G D+ VK+W + + + GH + +V + +G+
Sbjct: 266 GHGWDVKSVDWHPTKS--LLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGN 323
Query: 689 LCASGGKDMKAMLWDLNDGKHLHT 760
+ KD L+D+ K L +
Sbjct: 324 WLLTASKDQIIKLYDIRTMKELQS 347
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/67 (23%), Positives = 31/67 (46%)
Frame = +3
Query: 270 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 449
I+ V+ + G ++GS LW+ + + H + + S+ +S + +VSG
Sbjct: 126 INRVLWTPSGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQPIRSMVWSHNENYMVSGDD 185
Query: 450 DKTIKLW 470
T+K W
Sbjct: 186 GGTLKYW 192
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +1
Query: 85 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIP 240
T+K + RGH VT +A +P + + +S S D ++ W + + IP
Sbjct: 341 TMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIVGHENPQIEIP 392
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 384 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 476
H DV SV + +VSG +D+ +KLW+T
Sbjct: 267 HGWDVKSVDWHPTKSLLVSGGKDQLVKLWDT 297
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 52.0 bits (119), Expect = 5e-07
Identities = 24/76 (31%), Positives = 40/76 (52%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GH D VSC+ +PN+ I S D +++W +++ + GH G + +T S DG+
Sbjct: 54 GHRDGVSCMAKNPNYLKGIF-SASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTDGN 112
Query: 689 LCASGGKDMKAMLWDL 736
+ S G D LW++
Sbjct: 113 VLVSCGTDCTVRLWNV 128
Score = 41.9 bits (94), Expect = 5e-04
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = +3
Query: 258 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD---VLSVAFSVDNR 428
H + D+ S G ++GS+D+++R++ G + + HTK V V +S D
Sbjct: 278 HVSAVMDIDFSPTGREFVTGSYDRSVRIFPYNGGHSREIY--HTKRMQRVFCVKYSCDAT 335
Query: 429 QIVSGSRDKTIKLWNTLA 482
++SGS D ++LW A
Sbjct: 336 YVISGSDDTNLRLWKAKA 353
Score = 31.5 bits (68), Expect = 0.76
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 231 RYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 350
R T F GH + + S+DGN +S D T+RLW++
Sbjct: 89 RRTVCQFPGHQGAVRGLTASTDGNVLVSCGTDCTVRLWNV 128
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 100 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT 213
G + GH V+ +A NP Y I S+S D + +W ++
Sbjct: 50 GAMDGHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDIS 87
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3
Query: 279 VVLSSDGNYALSGSWDKTLRLWDLAAGK 362
V S D Y +SGS D LRLW A +
Sbjct: 328 VKYSCDATYVISGSDDTNLRLWKAKASE 355
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 52.0 bits (119), Expect = 5e-07
Identities = 28/84 (33%), Positives = 41/84 (48%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GH ++ +R++ N ++ SC D T VW N + + GHSG + +S D S
Sbjct: 35 GHERPLTFLRYNRN--GDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISRDSS 92
Query: 689 LCASGGKDMKAMLWDLNDGKHLHT 760
+G D A LWD+ GK L T
Sbjct: 93 RLITGSADQTAKLWDVKSGKELFT 116
Score = 44.8 bits (101), Expect = 8e-05
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Frame = +3
Query: 309 LSGSWDKTLRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
+SG D +R+WD GK ++ ++ H + + S+ + D+ ++GS DKT KLW+
Sbjct: 191 VSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLWD 248
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Frame = +2
Query: 557 NPIIVSCGWDRTVKVWHLTNCKL---KINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 727
N IVS G D +++W KL +GH + ++ + D S +G D A L
Sbjct: 187 NQTIVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKL 246
Query: 728 WDLNDGKHLHTLTTMISSLPCASQP 802
WD+ + T TT++ A P
Sbjct: 247 WDMRTLTLIKTYTTVVPVNAVAMSP 271
Score = 37.9 bits (84), Expect = 0.009
Identities = 19/73 (26%), Positives = 37/73 (50%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
GH ++ + + +G+ S + D T +W G+ + H+ V S D+ ++
Sbjct: 35 GHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISRDSSRL 94
Query: 435 VSGSRDKTIKLWN 473
++GS D+T KLW+
Sbjct: 95 ITGSADQTAKLWD 107
Score = 36.7 bits (81), Expect = 0.020
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +3
Query: 210 DQRRKQLRYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 389
D +L S +GH I+ + ++D ++ L+GS DKT +LWD+ + +
Sbjct: 203 DAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLWDMRTLTLIKTYTT-V 261
Query: 390 KDVLSVAFS-VDNRQIVSGSRD 452
V +VA S + N ++ G +D
Sbjct: 262 VPVNAVAMSPLLNHVVLGGGQD 283
Score = 34.7 bits (76), Expect = 0.082
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
GHS + +S D + ++GS D+T +LWD+ +GK F+ SV FSV +
Sbjct: 77 GHSGAVWCCDISRDSSRLITGSADQTAKLWDVKSGKELFTFK-FGAPARSVDFSVGDHLA 135
Query: 435 V 437
V
Sbjct: 136 V 136
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 641 GHSGYLNTVTVSPDGSLCASGGKD 712
GH G +N + SPDG +SGG+D
Sbjct: 315 GHFGPINALAFSPDGKSFSSGGED 338
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 51.6 bits (118), Expect = 7e-07
Identities = 27/89 (30%), Positives = 44/89 (49%)
Frame = +3
Query: 231 RYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 410
++ + +I H+ +S + L+ + S SWD+T+++W +A K H V SV
Sbjct: 196 KHRTALWIKHADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSVV 255
Query: 411 FSVDNRQIVSGSRDKTIKLWNTLAECKYT 497
S + SGS D T+K W + KYT
Sbjct: 256 -STTEAIVFSGSADGTVKAWKRDQQGKYT 283
Score = 47.6 bits (108), Expect = 1e-05
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL 691
H+D VSC+ S N ++ S WDRT+KVW + + K + H +N+V VS ++
Sbjct: 205 HADAVSCL--SLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSV-VSTTEAI 261
Query: 692 CASGGKDMKAMLWDLN-DGKHL-HTL 763
SG D W + GK+ HTL
Sbjct: 262 VFSGSADGTVKAWKRDQQGKYTKHTL 287
Score = 33.9 bits (74), Expect = 0.14
Identities = 29/97 (29%), Positives = 41/97 (42%), Gaps = 11/97 (11%)
Frame = +3
Query: 213 QRRKQLRYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTT--RRFEDH 386
+R KQL Y I H ++ + L G+ SGS DKT+ +W T H
Sbjct: 323 EREKQLNYGG---ILKGHKLAVLCLEVAGSLVFSGSADKTICVWKRDGNIHTCLSVLTGH 379
Query: 387 TKDVLSVAFSVDNRQ---------IVSGSRDKTIKLW 470
T V +A D + SGS DK++K+W
Sbjct: 380 TGPVKCLAVEADREASERRDKKWIVYSGSLDKSVKVW 416
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 51.6 bits (118), Expect = 7e-07
Identities = 27/73 (36%), Positives = 39/73 (53%)
Frame = +3
Query: 252 IGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 431
I H +S + L+ D SGSWDKTL++W L+ K E H V +V D+
Sbjct: 242 IRHFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTVVSGFDD-L 300
Query: 432 IVSGSRDKTIKLW 470
+ +GS D T+K+W
Sbjct: 301 VFTGSADGTLKVW 313
Score = 42.3 bits (95), Expect = 4e-04
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL 691
H D VSC+ S N ++ S WD+T+KVW L++ K + H +NTV VS L
Sbjct: 244 HFDAVSCL--SLNEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTV-VSGFDDL 300
Query: 692 CASGGKDMKAMLWDLN-DGKHL-HTLTTMI 775
+G D +W GK + H L ++
Sbjct: 301 VFTGSADGTLKVWKREVQGKEMKHVLVQVL 330
Score = 31.1 bits (67), Expect = 1.0
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Frame = +2
Query: 566 IVSCGW-DRTVKVWHLTNCKLKINHLG--HSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 736
+V CG D TV W + H G H + + ++ GSL SGG D +W
Sbjct: 348 VVYCGSSDGTVNFWERQKY---LTHKGTIHGHRMAVLCLATAGSLLLSGGADKNICVWKR 404
Query: 737 N-DGKH 751
N DG H
Sbjct: 405 NGDGSH 410
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 51.6 bits (118), Expect = 7e-07
Identities = 37/115 (32%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCK-LKINHLGHSGYLNTVTVSPDGS 688
H D VS + S + + ++ S WDR+ K+W ++ K L H +N + VS DG
Sbjct: 191 HVDAVSSLALSQDGS--LLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVSKDG- 247
Query: 689 LCASGGKDMKAMLWDLNDGKH--LHTLTTMISSLPCASQPTDTGYVLLSDLPSRS 847
+G D K +W+ D KH + TLT +S++ + D G VL S RS
Sbjct: 248 FVYTGSADKKIKVWNKKDKKHSLVATLTKHLSAVNALAISED-GKVLYSGACDRS 301
Score = 50.8 bits (116), Expect = 1e-06
Identities = 23/81 (28%), Positives = 40/81 (49%)
Frame = +3
Query: 231 RYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 410
R+ ++ H +S + LS DG+ S SWD++ ++W + K E D ++
Sbjct: 182 RHKKCTWVHHVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAI 241
Query: 411 FSVDNRQIVSGSRDKTIKLWN 473
+ + +GS DK IK+WN
Sbjct: 242 VVSKDGFVYTGSADKKIKVWN 262
Score = 39.1 bits (87), Expect = 0.004
Identities = 31/89 (34%), Positives = 43/89 (48%), Gaps = 13/89 (14%)
Frame = +3
Query: 246 AFIGHSHFISDVVLSSDGNYALSGSWDKTLRLW-----DLAAGKTTRRFEDHTKDVLSVA 410
A GH I + ++SD LSGS DK+LR+W + E HTK V S+A
Sbjct: 323 ALRGHRKAIMCLAVASD--LVLSGSADKSLRVWRRGLMEKEGYSCLAVLEGHTKPVKSLA 380
Query: 411 FSVDNRQ--------IVSGSRDKTIKLWN 473
SV + + SGS D ++K+WN
Sbjct: 381 VSVSDSDSNSDYSCMVYSGSLDLSLKVWN 409
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Frame = +3
Query: 258 HSHFISDVVLSSDGNYALSGSWDKTLRLWD-LAAG-------KTTRRFEDHTKDVLSVAF 413
H ++ + +S DG SG+ D+++ +W+ L G H K ++ +A
Sbjct: 277 HLSAVNALAISEDGKVLYSGACDRSILVWERLINGDDEELHMSVVGALRGHRKAIMCLAV 336
Query: 414 SVDNRQIVSGSRDKTIKLW 470
+ D ++SGS DK++++W
Sbjct: 337 ASD--LVLSGSADKSLRVW 353
Score = 32.3 bits (70), Expect = 0.44
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Frame = +2
Query: 584 DRTVKVWHLTNCK--LKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD--LN-DGK 748
D+ +KVW+ + K L H +N + +S DG + SG D ++W+ +N D +
Sbjct: 255 DKKIKVWNKKDKKHSLVATLTKHLSAVNALAISEDGKVLYSGACDRSILVWERLINGDDE 314
Query: 749 HLH 757
LH
Sbjct: 315 ELH 317
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 100 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 207
G LRGH + +A D++LS S DK+L VW+
Sbjct: 322 GALRGHRKAIMCLAVAS---DLVLSGSADKSLRVWR 354
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/80 (21%), Positives = 32/80 (40%)
Frame = +2
Query: 626 KINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLTTMISSLPCASQPT 805
K + H ++++ +S DGSL S D +W +D K L ++ A +
Sbjct: 185 KCTWVHHVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVS 244
Query: 806 DTGYVLLSDLPSRSGIWKAR 865
G+V + +W +
Sbjct: 245 KDGFVYTGSADKKIKVWNKK 264
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 51.2 bits (117), Expect = 9e-07
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +3
Query: 228 LRYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSV 407
L ++S G+S I V S+DG ++GS D ++ ++DL A + + R HT DV +V
Sbjct: 218 LDFSSDEDGGYSFGIFSVKFSTDGREVVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTV 277
Query: 408 AFSVDN-RQIVSGSRDKTIKLWN 473
F+ ++ I+SGS D K+W+
Sbjct: 278 CFADESGNLILSGSDDNLCKVWD 300
Score = 41.1 bits (92), Expect = 0.001
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Frame = +3
Query: 252 IGHSHFISDVVLSSD-GNYALSGSWDKTLRLWD----LAAGKTTRRFEDHTKDVLSVAFS 416
+ H+ ++ V + + GN LSGS D ++WD + K H + V +
Sbjct: 268 VAHTSDVNTVCFADESGNLILSGSDDNLCKVWDRRCFIGRDKPAGVLVGHLEGVTFIDSR 327
Query: 417 VDNRQIVSGSRDKTIKLWN 473
D R +S +D+TIKLW+
Sbjct: 328 GDGRYFISNGKDQTIKLWD 346
Score = 32.3 bits (70), Expect = 0.44
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPD-G 685
G+S + V+FS + +V+ D ++ V+ L ++ + + H+ +NTV + + G
Sbjct: 227 GYSFGIFSVKFSTDGRE--VVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESG 284
Query: 686 SLCASGGKDMKAMLWD 733
+L SG D +WD
Sbjct: 285 NLILSGSDDNLCKVWD 300
Score = 31.9 bits (69), Expect = 0.58
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +3
Query: 252 IGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 350
+GH ++ + DG Y +S D+T++LWD+
Sbjct: 315 VGHLEGVTFIDSRGDGRYFISNGKDQTIKLWDI 347
Score = 28.7 bits (61), Expect = 5.4
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 5/80 (6%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINH-----LGHSGYLNTVTVS 676
H+ V+ V F+ N +I+S D KVW C + + +GH + +
Sbjct: 270 HTSDVNTVCFADESGN-LILSGSDDNLCKVWD-RRCFIGRDKPAGVLVGHLEGVTFIDSR 327
Query: 677 PDGSLCASGGKDMKAMLWDL 736
DG S GKD LWD+
Sbjct: 328 GDGRYFISNGKDQTIKLWDI 347
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 51.2 bits (117), Expect = 9e-07
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Frame = +3
Query: 309 LSGSWDKTLRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
+SG DK +R+WD GK ++ ++ H KD+ S+ + D+ ++GS DKT KLW+
Sbjct: 164 VSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWD 221
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/84 (32%), Positives = 40/84 (47%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GH ++ +R+ N ++ SC D T +W N + + GH+G + VS D S
Sbjct: 8 GHERPLTFLRY--NREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSS 65
Query: 689 LCASGGKDMKAMLWDLNDGKHLHT 760
+G D A LWD+ GK L T
Sbjct: 66 RLITGSADQTAKLWDVKSGKELFT 89
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = +2
Query: 557 NPIIVSCGWDRTVKVWHLTNCKL---KINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 727
N IVS G D+ +++W KL +GH + ++ + D S +G D A L
Sbjct: 160 NQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKL 219
Query: 728 WDLNDGKHLHTLTTMI 775
WD+ L T TT++
Sbjct: 220 WDMRTLTLLKTYTTVV 235
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/73 (27%), Positives = 36/73 (49%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
GH ++ + + +G+ S + D T LW G+ + H V S D+ ++
Sbjct: 8 GHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRL 67
Query: 435 VSGSRDKTIKLWN 473
++GS D+T KLW+
Sbjct: 68 ITGSADQTAKLWD 80
Score = 35.5 bits (78), Expect = 0.047
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 210 DQRRKQLRYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 350
D +L S +GH I+ + ++D ++ L+GS DKT +LWD+
Sbjct: 176 DAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDM 222
Score = 34.7 bits (76), Expect = 0.082
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
GH+ + +S D + ++GS D+T +LWD+ +GK F+ SV F+V +R
Sbjct: 50 GHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFK-FNAPTRSVDFAVGDRLA 108
Query: 435 V 437
V
Sbjct: 109 V 109
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/75 (21%), Positives = 30/75 (40%)
Frame = +2
Query: 641 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLTTMISSLPCASQPTDTGYV 820
GH L + + +G L S KD LW ++G+ L T ++ C D+ +
Sbjct: 8 GHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRL 67
Query: 821 LLSDLPSRSGIWKAR 865
+ + +W +
Sbjct: 68 ITGSADQTAKLWDVK 82
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 423 NRQIVSGSRDKTIKLWNTLAECKYTIQDEDTAIGCHVSD 539
N+ IVSG DK I++W+ AE ++ D +G H D
Sbjct: 160 NQTIVSGGEDKVIRIWD--AETGKLLKQSDEEVG-HKKD 195
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 51.2 bits (117), Expect = 9e-07
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Frame = +3
Query: 309 LSGSWDKTLRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
+SG DK +R+WD GK ++ ++ H KD+ S+ + D+ ++GS DKT KLW+
Sbjct: 164 VSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWD 221
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/84 (32%), Positives = 40/84 (47%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GH ++ +R+ N ++ SC D T +W N + + GH+G + VS D S
Sbjct: 8 GHERPLTFLRY--NREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSS 65
Query: 689 LCASGGKDMKAMLWDLNDGKHLHT 760
+G D A LWD+ GK L T
Sbjct: 66 RLITGSADQTAKLWDVKSGKELFT 89
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = +2
Query: 557 NPIIVSCGWDRTVKVWHLTNCKL---KINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 727
N IVS G D+ +++W KL +GH + ++ + D S +G D A L
Sbjct: 160 NQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKL 219
Query: 728 WDLNDGKHLHTLTTMI 775
WD+ L T TT++
Sbjct: 220 WDMRTLTLLKTYTTVV 235
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/73 (27%), Positives = 36/73 (49%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
GH ++ + + +G+ S + D T LW G+ + H V S D+ ++
Sbjct: 8 GHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRL 67
Query: 435 VSGSRDKTIKLWN 473
++GS D+T KLW+
Sbjct: 68 ITGSADQTAKLWD 80
Score = 35.9 bits (79), Expect = 0.035
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Frame = +3
Query: 210 DQRRKQLRYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 389
D +L S +GH I+ + ++D ++ L+GS DKT +LWD+ +T + +T
Sbjct: 176 DAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDM---RTLTLLKTYT 232
Query: 390 KDVLSVAFSVD---NRQIVSGSRD 452
V A S+ N ++ G +D
Sbjct: 233 TVVPVNAVSLSPLLNHVVLGGGQD 256
Score = 34.7 bits (76), Expect = 0.082
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
GH+ + +S D + ++GS D+T +LWD+ +GK F+ SV F+V +R
Sbjct: 50 GHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFK-FNAPTRSVDFAVGDRLA 108
Query: 435 V 437
V
Sbjct: 109 V 109
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/75 (21%), Positives = 30/75 (40%)
Frame = +2
Query: 641 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLTTMISSLPCASQPTDTGYV 820
GH L + + +G L S KD LW ++G+ L T ++ C D+ +
Sbjct: 8 GHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRL 67
Query: 821 LLSDLPSRSGIWKAR 865
+ + +W +
Sbjct: 68 ITGSADQTAKLWDVK 82
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 641 GHSGYLNTVTVSPDGSLCASGGKD 712
GH G +N + +PDG +SGG+D
Sbjct: 288 GHFGPINALAFNPDGKSFSSGGED 311
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 423 NRQIVSGSRDKTIKLWNTLAECKYTIQDEDTAIGCHVSD 539
N+ IVSG DK I++W+ AE ++ D +G H D
Sbjct: 160 NQTIVSGGEDKVIRIWD--AETGKLLKQSDEEVG-HKKD 195
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 51.2 bits (117), Expect = 9e-07
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Frame = +3
Query: 309 LSGSWDKTLRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
+SG DK +R+WD GK ++ ++ H KD+ S+ + D+ ++GS DKT KLW+
Sbjct: 164 VSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWD 221
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/84 (32%), Positives = 40/84 (47%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GH ++ +R+ N ++ SC D T +W N + + GH+G + VS D S
Sbjct: 8 GHERPLTFLRY--NREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSS 65
Query: 689 LCASGGKDMKAMLWDLNDGKHLHT 760
+G D A LWD+ GK L T
Sbjct: 66 RLITGSADQTAKLWDVKSGKELFT 89
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = +2
Query: 557 NPIIVSCGWDRTVKVWHLTNCKL---KINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 727
N IVS G D+ +++W KL +GH + ++ + D S +G D A L
Sbjct: 160 NQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKL 219
Query: 728 WDLNDGKHLHTLTTMI 775
WD+ L T TT++
Sbjct: 220 WDMRTLTLLKTYTTVV 235
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/73 (27%), Positives = 36/73 (49%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
GH ++ + + +G+ S + D T LW G+ + H V S D+ ++
Sbjct: 8 GHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRL 67
Query: 435 VSGSRDKTIKLWN 473
++GS D+T KLW+
Sbjct: 68 ITGSADQTAKLWD 80
Score = 35.9 bits (79), Expect = 0.035
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Frame = +3
Query: 210 DQRRKQLRYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 389
D +L S +GH I+ + ++D ++ L+GS DKT +LWD+ +T + +T
Sbjct: 176 DAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDM---RTLTLLKTYT 232
Query: 390 KDVLSVAFSVD---NRQIVSGSRD 452
V A S+ N ++ G +D
Sbjct: 233 TVVPVNAVSLSPLLNHVVLGGGQD 256
Score = 34.7 bits (76), Expect = 0.082
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
GH+ + +S D + ++GS D+T +LWD+ +GK F+ SV F+V +R
Sbjct: 50 GHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFK-FNAPTRSVDFAVGDRLA 108
Query: 435 V 437
V
Sbjct: 109 V 109
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/75 (21%), Positives = 30/75 (40%)
Frame = +2
Query: 641 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLTTMISSLPCASQPTDTGYV 820
GH L + + +G L S KD LW ++G+ L T ++ C D+ +
Sbjct: 8 GHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRL 67
Query: 821 LLSDLPSRSGIWKAR 865
+ + +W +
Sbjct: 68 ITGSADQTAKLWDVK 82
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 641 GHSGYLNTVTVSPDGSLCASGGKD 712
GH G +N + +PDG +SGG+D
Sbjct: 288 GHFGPINALAFNPDGKSFSSGGED 311
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 423 NRQIVSGSRDKTIKLWNTLAECKYTIQDEDTAIGCHVSD 539
N+ IVSG DK I++W+ AE ++ D +G H D
Sbjct: 160 NQTIVSGGEDKVIRIWD--AETGKLLKQSDEEVG-HKKD 195
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 50.8 bits (116), Expect = 1e-06
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 1/126 (0%)
Frame = +3
Query: 147 SEIPGHDLIFLSRQNSHRVEADQRRKQLRYTSKAFIGHSHFISDVVLSSDGNYALSGSWD 326
S+ GH +F S A + + + +I H + I D+ + L+ S D
Sbjct: 90 SDEDGHVSLFNSSSKKFASSATHQENTEKARFRDWIAHYNAIFDISWIKGDSCLLTASGD 149
Query: 327 KTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ-IVSGSRDKTIKLWNTLAECKYTIQ 503
+T+++WD+ K T HT V S+ N +VSGSRD LW+ CK +
Sbjct: 150 QTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWD--LRCKSSSH 207
Query: 504 DEDTAI 521
E+ I
Sbjct: 208 KEEFCI 213
Score = 37.5 bits (83), Expect = 0.012
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +2
Query: 566 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS-LCASGGKDMKAMLWDLND 742
+++ D+T+KVW + K +GH+G + ++ P S L SG +D LWDL
Sbjct: 143 LLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWDLRC 202
Query: 743 GKHLHTLTTMISS 781
H I+S
Sbjct: 203 KSSSHKEEFCINS 215
Score = 35.9 bits (79), Expect = 0.035
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 82 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 210
E K G L GH G V + ++P D+++S SRD +W L
Sbjct: 158 EENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWDL 200
Score = 35.9 bits (79), Expect = 0.035
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +3
Query: 267 FISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDN-RQIVS 440
F ++S DG Y LSGS D +W + + + H +V +V +S ++ +
Sbjct: 340 FFVRTMISPDGEYVLSGSSDGNAYIWQVNKPQVDPIILKGHDFEVTAVDWSPSEIGKVAT 399
Query: 441 GSRDKTIKLWN 473
S D T++LWN
Sbjct: 400 ASDDFTVRLWN 410
Score = 27.9 bits (59), Expect = 9.4
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 671 VSPDGSLCASGGKDMKAMLWDLN 739
+SPDG SG D A +W +N
Sbjct: 346 ISPDGEYVLSGSSDGNAYIWQVN 368
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 50.8 bits (116), Expect = 1e-06
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Frame = +3
Query: 240 SKAFIGHSHFISDVVLS-SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 416
++ F GHSH++ V + D N S S D+T+++W+L + + H K V V +
Sbjct: 135 TQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYF 194
Query: 417 V--DNRQIVSGSRDKTIKLWN-TLAECKYTIQDEDTAIGCHVSDSHPIMP 557
D +++GS D T K+W+ C T++ + VS HP +P
Sbjct: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSA-VS-FHPELP 242
Score = 49.2 bits (112), Expect = 4e-06
Identities = 21/66 (31%), Positives = 36/66 (54%)
Frame = +3
Query: 276 DVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDK 455
D D Y ++GS D T ++WD + E HT +V +V+F + I++GS D
Sbjct: 192 DYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDG 251
Query: 456 TIKLWN 473
T+++W+
Sbjct: 252 TVRIWH 257
Score = 40.3 bits (90), Expect = 0.002
Identities = 30/120 (25%), Positives = 45/120 (37%), Gaps = 2/120 (1%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVT--VSPD 682
GHS +V V F+P N S DRT+K+W+L + H +N V D
Sbjct: 140 GHSHYVMQVTFNPKDTNTF-ASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGD 198
Query: 683 GSLCASGGKDMKAMLWDLNDGKHLHTLTTMISSLPCASQPTDTGYVLLSDLPSRSGIWKA 862
+G D A +WD + TL ++ S + ++ IW A
Sbjct: 199 KPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWHA 258
Score = 36.7 bits (81), Expect = 0.020
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 10/90 (11%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLK--INH-------LGH-SGYL 658
GH+ VS V F P PII++ D TV++WH T +L+ +N+ +GH G
Sbjct: 227 GHTHNVSAVSFHPEL--PIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGHIKGSR 284
Query: 659 NTVTVSPDGSLCASGGKDMKAMLWDLNDGK 748
V +GS+ G+++ D N GK
Sbjct: 285 RVVIGYDEGSIMVKLGREIPVASMD-NSGK 313
Score = 35.9 bits (79), Expect = 0.035
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +1
Query: 112 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNY 231
GH+ +V Q+ NPK + S+S D+T+ +W L + N+
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF 179
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
GH+H +S V + ++GS D T+R+W + + V ++ +R++
Sbjct: 227 GHTHNVSAVSFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGHIKGSRRV 286
Query: 435 VSGSRDKTI 461
V G + +I
Sbjct: 287 VIGYDEGSI 295
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 50.0 bits (114), Expect = 2e-06
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Frame = +3
Query: 231 RYTSKAFIGHSHF--ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 404
R S A +G H IS + LS D SGSWDKT ++W ++ + H +D ++
Sbjct: 199 RNRSSAALGFRHLDAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESVNAH-EDAVN 257
Query: 405 VAFSVDNRQIVSGSRDKTIKLWNTLAECKYT 497
S + + +GS D T+K+W + K T
Sbjct: 258 AVVSGFDGLVFTGSADGTVKVWRREDQAKDT 288
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL 691
H D +SC+ S + ++ S WD+T KVW +++ + + H +N V DG L
Sbjct: 210 HLDAISCLALSEDKR--LLYSGSWDKTFKVWRVSDLRCVESVNAHEDAVNAVVSGFDG-L 266
Query: 692 CASGGKDMKAMLWDLND 742
+G D +W D
Sbjct: 267 VFTGSADGTVKVWRRED 283
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/82 (32%), Positives = 43/82 (52%)
Frame = +3
Query: 252 IGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 431
I H +S + L+ + SGSWDKTL++W L+ K + H + +VA D+
Sbjct: 246 IRHYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDSKCLESIQAHDDAINTVAAGFDD-L 304
Query: 432 IVSGSRDKTIKLWNTLAECKYT 497
+ +GS D T+K+W + K T
Sbjct: 305 LFTGSADGTLKVWKRELQGKGT 326
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/73 (34%), Positives = 36/73 (49%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL 691
H D VSC+ S N ++ S WD+T+KVW L++ K + H +NTV D L
Sbjct: 248 HYDAVSCL--SLNEELGLLYSGSWDKTLKVWRLSDSKCLESIQAHDDAINTVAAGFD-DL 304
Query: 692 CASGGKDMKAMLW 730
+G D +W
Sbjct: 305 LFTGSADGTLKVW 317
Score = 30.7 bits (66), Expect = 1.3
Identities = 28/88 (31%), Positives = 36/88 (40%), Gaps = 5/88 (5%)
Frame = +2
Query: 566 IVSCGW-DRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 739
+V CG D TV W L GH L + ++ GSL SGG D +W N
Sbjct: 352 VVYCGSSDGTVNFWEGQKYLSHGGTLRGHR--LAVLCLAAAGSLVLSGGADKNICVWRRN 409
Query: 740 -DGKH--LHTLTTMISSLPCASQPTDTG 814
DG H L L + + C + D G
Sbjct: 410 GDGSHSCLSVLMDHVGPVKCLTAVEDDG 437
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +3
Query: 246 AFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VD 422
+F GH + D+ S + LS S DKT+RLW+L++ +T + H+ V + F+ VD
Sbjct: 508 SFQGHVDDVLDLAWSKS-QHLLSSSMDKTVRLWNLSS-QTCLKVFSHSDYVTCIQFNPVD 565
Query: 423 NRQIVSGSRDKTIKLWN 473
+R +SGS D +++W+
Sbjct: 566 DRYFISGSLDAKVRVWS 582
Score = 36.7 bits (81), Expect = 0.020
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = +3
Query: 375 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDEDTAIGC 527
F+ H DVL +A+S ++ ++S S DKT++LWN ++ + + C
Sbjct: 509 FQGHVDDVLDLAWS-KSQHLLSSSMDKTVRLWNLSSQTCLKVFSHSDYVTC 558
Score = 36.3 bits (80), Expect = 0.027
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DG 685
GH D V + +S + ++S D+TV++W+L++ + + HS Y+ + +P D
Sbjct: 511 GHVDDVLDLAWSKSQH---LLSSSMDKTVRLWNLSS-QTCLKVFSHSDYVTCIQFNPVDD 566
Query: 686 SLCASGGKDMKAMLWDLND 742
SG D K +W + D
Sbjct: 567 RYFISGSLDAKVRVWSIPD 585
Score = 32.3 bits (70), Expect = 0.44
Identities = 18/79 (22%), Positives = 38/79 (48%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL 691
HSD+V+C++F+P + +S D V+VW + + ++ ++ + + +PDG
Sbjct: 552 HSDYVTCIQFNPVD-DRYFISGSLDAKVRVWSIPDRQV-VDWYDLHEMVTSACYTPDGQG 609
Query: 692 CASGGKDMKAMLWDLNDGK 748
G ++ +D K
Sbjct: 610 VLVGSYKGSCRMYSASDNK 628
Score = 31.5 bits (68), Expect = 0.76
Identities = 16/73 (21%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 258 HSHFISDVVLSS-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
HS +++ + + D Y +SGS D +R+W + + ++ H + V S ++ D + +
Sbjct: 552 HSDYVTCIQFNPVDDRYFISGSLDAKVRVWSIPDRQVVDWYDLH-EMVTSACYTPDGQGV 610
Query: 435 VSGSRDKTIKLWN 473
+ GS + ++++
Sbjct: 611 LVGSYKGSCRMYS 623
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 49.2 bits (112), Expect = 4e-06
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Frame = +3
Query: 180 SRQNSHRVEADQRRKQLRYTS-KAFIGHSHFISDVV-LSSDGNYA----LSGSWDKTLRL 341
SR + RV + + +YTS K +GH+ F+ + + Y +SGS D + +
Sbjct: 38 SRDRTIRVWSLDPSDKRKYTSEKILLGHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFV 97
Query: 342 WDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 470
W+L G+ + + H V VA +DN IVS S D+T+K W
Sbjct: 98 WNLMNGENIQTLKGHQMQVTGVA--IDNEDIVSSSVDQTLKRW 138
Score = 36.3 bits (80), Expect = 0.027
Identities = 25/93 (26%), Positives = 43/93 (46%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
GH ++ V + D +S S D+TL+ W G+ ++ H + +V + + ++
Sbjct: 111 GHQMQVTGVAI--DNEDIVSSSVDQTLKRW--RNGQLVESWDAHQSPIQAV-IRLPSGEL 165
Query: 435 VSGSRDKTIKLWNTLAECKYTIQDEDTAIGCHV 533
VSGS D ++KLW + DT G V
Sbjct: 166 VSGSSDASLKLWKGKTSLQTLSGHTDTVRGLAV 198
Score = 30.3 bits (65), Expect = 1.8
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 10/85 (11%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED-----HTKDVLSVAF-- 413
GH + + + +D N A S S D+T+R+W L + + HT V +A+
Sbjct: 18 GHDDDVRGICVCNDENIATS-SRDRTIRVWSLDPSDKRKYTSEKILLGHTSFVGPLAWIP 76
Query: 414 ---SVDNRQIVSGSRDKTIKLWNTL 479
++VSGS D + +WN +
Sbjct: 77 PTDEYPEGRLVSGSMDTFVFVWNLM 101
Score = 28.3 bits (60), Expect = 7.1
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = +1
Query: 91 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRL*VIRTS 270
KLR L GH+ V I + I +SSRD+T+ VW L + +K L + TS
Sbjct: 11 KLRCELHGHDDDVRGICVCND--ENIATSSRDRTIRVWSLDPSDKRKYTSEKIL-LGHTS 67
Query: 271 FL 276
F+
Sbjct: 68 FV 69
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 49.2 bits (112), Expect = 4e-06
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Frame = +3
Query: 180 SRQNSHRVEADQRRKQLRYTS-KAFIGHSHFISDVV-LSSDGNYA----LSGSWDKTLRL 341
SR + RV + + +YTS K +GH+ F+ + + Y +SGS D + +
Sbjct: 38 SRDRTIRVWSLDPSDKRKYTSEKILLGHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFV 97
Query: 342 WDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 470
W+L G+ + + H V VA +DN IVS S D+T+K W
Sbjct: 98 WNLMNGENIQTLKGHQMQVTGVA--IDNEDIVSSSVDQTLKRW 138
Score = 36.3 bits (80), Expect = 0.027
Identities = 25/93 (26%), Positives = 43/93 (46%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
GH ++ V + D +S S D+TL+ W G+ ++ H + +V + + ++
Sbjct: 111 GHQMQVTGVAI--DNEDIVSSSVDQTLKRW--RNGQLVESWDAHQSPIQAV-IRLPSGEL 165
Query: 435 VSGSRDKTIKLWNTLAECKYTIQDEDTAIGCHV 533
VSGS D ++KLW + DT G V
Sbjct: 166 VSGSSDASLKLWKGKTSLQTLSGHTDTVRGLAV 198
Score = 30.3 bits (65), Expect = 1.8
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 10/85 (11%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED-----HTKDVLSVAF-- 413
GH + + + +D N A S S D+T+R+W L + + HT V +A+
Sbjct: 18 GHDDDVRGICVCNDENIATS-SRDRTIRVWSLDPSDKRKYTSEKILLGHTSFVGPLAWIP 76
Query: 414 ---SVDNRQIVSGSRDKTIKLWNTL 479
++VSGS D + +WN +
Sbjct: 77 PTDEYPEGRLVSGSMDTFVFVWNLM 101
Score = 28.3 bits (60), Expect = 7.1
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = +1
Query: 91 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRL*VIRTS 270
KLR L GH+ V I + I +SSRD+T+ VW L + +K L + TS
Sbjct: 11 KLRCELHGHDDDVRGICVCND--ENIATSSRDRTIRVWSLDPSDKRKYTSEKIL-LGHTS 67
Query: 271 FL 276
F+
Sbjct: 68 FV 69
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 49.2 bits (112), Expect = 4e-06
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 3/115 (2%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL 691
H+D V+ + S I S WD+T+K+W ++ + K + H +N + VS +G++
Sbjct: 194 HADAVTALAVSDG----FIYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAIAVSTNGTV 249
Query: 692 CASGGKDMKAMLWDLNDGKHLHTLTTMI---SSLPCASQPTDTGYVLLSDLPSRS 847
+G D + +W G+ HTL + S A D G VL S RS
Sbjct: 250 -YTGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNALALNDDGSVLFSGSCDRS 303
Score = 44.8 bits (101), Expect = 8e-05
Identities = 24/80 (30%), Positives = 45/80 (56%)
Frame = +3
Query: 231 RYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 410
R+ + +I H+ ++ + +S DG + S SWDKTL++W + + + H V ++A
Sbjct: 185 RHKKRLWIEHADAVTALAVS-DG-FIYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAIA 242
Query: 411 FSVDNRQIVSGSRDKTIKLW 470
S N + +GS D+ I++W
Sbjct: 243 VST-NGTVYTGSADRRIRVW 261
Score = 41.9 bits (94), Expect = 5e-04
Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Frame = +3
Query: 258 HSHFISDVVLSSDGNYALSGSWDKTLRLW---DLAAGKTTR-RFEDHTKDVLSVAFSVDN 425
H ++ + L+ DG+ SGS D+++ +W D + R H K +LS+ F+V +
Sbjct: 279 HKSAVNALALNDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAILSL-FNVSD 337
Query: 426 RQIVSGSRDKTIKLWNTLAECKYT 497
++SGS D+T+++W + Y+
Sbjct: 338 -LLLSGSADRTVRIWRRGPDSSYS 360
Score = 35.9 bits (79), Expect = 0.035
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Frame = +3
Query: 258 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF----EDHTKDVLSVAFSVDN 425
H ++ + +S++G +GS D+ +R+W G+ E H V ++A + D
Sbjct: 234 HDDAVNAIAVSTNGT-VYTGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNALALNDDG 292
Query: 426 RQIVSGSRDKTIKLW 470
+ SGS D++I +W
Sbjct: 293 SVLFSGSCDRSILVW 307
Score = 31.5 bits (68), Expect = 0.76
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +1
Query: 79 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN 225
S + +RG LRGH+ + + D++LS S D+T+ +W+ D +
Sbjct: 313 SNYMAVRGALRGHDKAILSLFN---VSDLLLSGSADRTVRIWRRGPDSS 358
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLG----HSGYLNTVTVSP 679
H D V+ + S N + + DR ++VW + + + H +N + ++
Sbjct: 234 HDDAVNAIAVSTNGT---VYTGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNALALND 290
Query: 680 DGSLCASGGKDMKAMLWDLND 742
DGS+ SG D ++W+ D
Sbjct: 291 DGSVLFSGSCDRSILVWERED 311
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 48.8 bits (111), Expect = 5e-06
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +3
Query: 249 FIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDN 425
F GH+ I D+ S G + LS S D+T+RLW + + R H V VAF+ VD+
Sbjct: 359 FRGHTGEILDLSWSEKG-FLLSSSVDETVRLWRVGSSDECIRVFSHKSFVTCVAFNPVDD 417
Query: 426 RQIVSGSRDKTIKLWN 473
+SGS D +++W+
Sbjct: 418 NYFISGSIDGKVRIWD 433
Score = 35.9 bits (79), Expect = 0.035
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +3
Query: 258 HSHFISDVVLSS-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
H F++ V + D NY +SGS D +R+WD++ + + D + V ++ + D +
Sbjct: 403 HKSFVTCVAFNPVDDNYFISGSIDGKVRIWDVSQFRVV-DYTDIRQIVTALCYRPDGKGA 461
Query: 435 VSGSRDKTIKLWNT 476
V GS + ++T
Sbjct: 462 VVGSMTGECRFYHT 475
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/79 (20%), Positives = 34/79 (43%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL 691
H +V+CV F+P N +S D V++W ++ ++ +++ + + PDG
Sbjct: 403 HKSFVTCVAFNPVDDN-YFISGSIDGKVRIWDVSQFRV-VDYTDIRQIVTALCYRPDGKG 460
Query: 692 CASGGKDMKAMLWDLNDGK 748
G + + D +
Sbjct: 461 AVVGSMTGECRFYHTTDNQ 479
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 48.8 bits (111), Expect = 5e-06
Identities = 24/75 (32%), Positives = 38/75 (50%)
Frame = +3
Query: 258 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 437
H+ I +LS Y + S DKT+++W+L K + H + V FS+D +V
Sbjct: 216 HNSHILKCLLSPGNKYLATASSDKTVKIWNLDGFKLEKVLTGHERWVWDCDFSMDGEYLV 275
Query: 438 SGSRDKTIKLWNTLA 482
+ S D T +LW+ A
Sbjct: 276 TASSDTTARLWSMRA 290
Score = 44.8 bits (101), Expect = 8e-05
Identities = 29/104 (27%), Positives = 44/104 (42%)
Frame = +2
Query: 437 VWFSRQDYQTLEHPCGVQVYHPR*GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTN 616
VW S + QT+ + H H+ + SP N + + D+TVK+W+L
Sbjct: 194 VWRSLCERQTMTE---FEPLHKLQAHNSHILKCLLSPG--NKYLATASSDKTVKIWNLDG 248
Query: 617 CKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGK 748
KL+ GH ++ S DG + D A LW + GK
Sbjct: 249 FKLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRAGK 292
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 392
K GH ++ D S DG Y ++ S D T RLW + AGK ++ H K
Sbjct: 253 KVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRAGKEEMVYQAHRK 302
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/99 (24%), Positives = 45/99 (45%)
Frame = +3
Query: 189 NSHRVEADQRRKQLRYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTT 368
N H D R + F+ H+ + V G+ SGS D ++++WDL +
Sbjct: 60 NPHIRLFDLRSYNPHIPVRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQ 119
Query: 369 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 485
R F V +V + +++SG ++ I++W+ A+
Sbjct: 120 REFRS-VSPVNTVVLHPNQTELISGDQNGNIRVWDLRAD 157
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Frame = +3
Query: 333 LRLWDLAAGKT---TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECK 491
+RL+DL + R F HTK+V++V F + SGS D ++K+W+ + EC+
Sbjct: 63 IRLFDLRSYNPHIPVRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQ 119
Score = 33.5 bits (73), Expect = 0.19
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 7/75 (9%)
Frame = +3
Query: 270 ISDVVLSSDGNYALSGSWDKTLRLW-DLAAGKTTRRFED------HTKDVLSVAFSVDNR 428
I + + DG ++ + T +W L +T FE H +L S N+
Sbjct: 171 IRSLTVMWDGTMVVAANDRGTCYVWRSLCERQTMTEFEPLHKLQAHNSHILKCLLSPGNK 230
Query: 429 QIVSGSRDKTIKLWN 473
+ + S DKT+K+WN
Sbjct: 231 YLATASSDKTVKIWN 245
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice
sites at introns 4 and 6
Length = 1017
Score = 48.4 bits (110), Expect = 6e-06
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 300 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWN 473
NY S +D ++LWD+ G+ F +H K SV FS ++ SGS D ++KLWN
Sbjct: 767 NYLASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVKLWN 825
Score = 32.3 bits (70), Expect = 0.44
Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +2
Query: 548 NHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPD-GSLCASGGKDMKAM 724
N+ + S +D VK+W +T + + + H +V S + ASG D
Sbjct: 763 NYIRNYLASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVK 822
Query: 725 LWDLNDGKHLHTLTTMISSLPCASQPTDTGYVL 823
LW++N+ L T+ I+++ C + ++L
Sbjct: 823 LWNINERNCLGTIRN-IANVCCVQFSPQSSHLL 854
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 384 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
H K V S A +DN +V+ S D T+KLW+
Sbjct: 881 HNKAV-SYAKFLDNETLVTASTDNTLKLWD 909
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 48.0 bits (109), Expect = 8e-06
Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 3/129 (2%)
Frame = +2
Query: 488 QVYHPR*GHSDWVSCV---RFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYL 658
+V H GH+D V V +FS H +VS +DRT+K+W L + N + +
Sbjct: 306 RVRHTLTGHTDKVCAVDVSKFSSRH----VVSAAYDRTIKLWDL-HKGYCTNTVLFTSNC 360
Query: 659 NTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLTTMISSLPCASQPTDTGYVLLSDLP 838
N + +S DG SG D LWD+ GK L + S++ S + +L S
Sbjct: 361 NAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRD 420
Query: 839 SRSGIWKAR 865
+ ++ R
Sbjct: 421 NVHNVFDTR 429
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/66 (34%), Positives = 34/66 (51%)
Frame = +3
Query: 279 VVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 458
+ LS DG SG D LRLWD+ GK H+ V SV+ S + +I++ RD
Sbjct: 363 ICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNV 422
Query: 459 IKLWNT 476
+++T
Sbjct: 423 HNVFDT 428
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-V 419
K+ G I D+ ++ D ++ + L +WD+++G+ HT V +V S
Sbjct: 267 KSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKF 326
Query: 420 DNRQIVSGSRDKTIKLWN 473
+R +VS + D+TIKLW+
Sbjct: 327 SSRHVVSAAYDRTIKLWD 344
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +3
Query: 255 GHSHFISDVVLSS-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 431
GH+ + V +S + +S ++D+T++LWDL G T T + ++ S+D
Sbjct: 313 GHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTVL-FTSNCNAICLSIDGLT 371
Query: 432 IVSGSRDKTIKLWN 473
+ SG D ++LW+
Sbjct: 372 VFSGHMDGNLRLWD 385
Score = 35.5 bits (78), Expect = 0.047
Identities = 12/72 (16%), Positives = 33/72 (45%)
Frame = +3
Query: 258 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 437
H +V + +G D+ +++WD +G + ++L +A + DN+ ++
Sbjct: 230 HEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVI 289
Query: 438 SGSRDKTIKLWN 473
+ + + +W+
Sbjct: 290 AATSSNNLFVWD 301
Score = 35.5 bits (78), Expect = 0.047
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 578 GWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLH 757
G DR VK+W + L + G G + + V+ D + +WD++ G+ H
Sbjct: 250 GQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVWDVSSGRVRH 309
Query: 758 TLT 766
TLT
Sbjct: 310 TLT 312
Score = 30.7 bits (66), Expect = 1.3
Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 4/100 (4%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKL--KINHLGH--SGYLNTVTVS 676
GHS V+ V S N N I+ S G D V+ ++ + G+ + + +S
Sbjct: 397 GHSSAVTSVSLSRN-GNRILTS-GRDNVHNVFDTRTLEICGTLRASGNRLASNWSRSCIS 454
Query: 677 PDGSLCASGGKDMKAMLWDLNDGKHLHTLTTMISSLPCAS 796
PD A+G D +W L+ G + L S + C S
Sbjct: 455 PDDDYVAAGSADGSVHVWSLSKGNIVSILKEQTSPILCCS 494
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +2
Query: 551 HANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL-CASGGKDMKAML 727
H N +++ + VW +++ +++ GH+ + V VS S S D L
Sbjct: 283 HDNKSVIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKL 342
Query: 728 WDLNDGKHLHTL 763
WDL+ G +T+
Sbjct: 343 WDLHKGYCTNTV 354
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/93 (19%), Positives = 38/93 (40%)
Frame = +2
Query: 578 GWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLH 757
G D V+ + C +I+ H G ++ + +GG+D +WD N G +
Sbjct: 210 GTDHFVESTIPSTCANRIH--AHEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIK 267
Query: 758 TLTTMISSLPCASQPTDTGYVLLSDLPSRSGIW 856
+L + ++ + D V+ + + +W
Sbjct: 268 SLYGSLGNILDMAVTHDNKSVIAATSSNNLFVW 300
Score = 28.7 bits (61), Expect = 5.4
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWD---LAAGKTTRRFEDHTKDVLS-VAFSVD 422
GHS ++ V LS +GN L+ D ++D L T R + S S D
Sbjct: 397 GHSSAVTSVSLSRNGNRILTSGRDNVHNVFDTRTLEICGTLRASGNRLASNWSRSCISPD 456
Query: 423 NRQIVSGSRDKTIKLWN 473
+ + +GS D ++ +W+
Sbjct: 457 DDYVAAGSADGSVHVWS 473
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 48.0 bits (109), Expect = 8e-06
Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 3/122 (2%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GH + V C F + + +++ DR VK+W + + GH G + + VS + +
Sbjct: 303 GHRNAVYCAIF--DRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNA 360
Query: 689 LCASGGKDMKAMLWDLNDGKHLHTL---TTMISSLPCASQPTDTGYVLLSDLPSRSGIWK 859
L AS D +W L DG + L T ++++ + + +L S IW
Sbjct: 361 LVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWD 420
Query: 860 AR 865
AR
Sbjct: 421 AR 422
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/92 (22%), Positives = 38/92 (41%)
Frame = +3
Query: 195 HRVEADQRRKQLRYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR 374
H + Q K GH + + + G Y ++GS D+ +++W +
Sbjct: 283 HAIAKPSTMVQKMQNIKKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLAS 342
Query: 375 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 470
H D+ +A S +N + S S D I++W
Sbjct: 343 CRGHEGDITDLAVSSNNALVASASNDFVIRVW 374
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS---VDN 425
GH I+D+ +SS+ S S D +R+W L G HT V ++AFS
Sbjct: 345 GHEGDITDLAVSSNNALVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASV 404
Query: 426 RQIVSGSRDKTIKLWN 473
Q++S S D T ++W+
Sbjct: 405 YQLLSSSDDGTCRIWD 420
Score = 32.7 bits (71), Expect = 0.33
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDM--ILSSSRDKTLIVW 204
LRGH G VT IA +P+ + +LSSS D T +W
Sbjct: 385 LRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIW 419
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 47.6 bits (108), Expect = 1e-05
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 9/87 (10%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWD--LAAGKTTR----RFEDHTKDVLS 404
+ ++GH+ + + S GN SG D + +WD LA+ K TR RFE+HT V +
Sbjct: 246 ETYLGHTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHTAAVRA 305
Query: 405 VAFSVDNRQIVS---GSRDKTIKLWNT 476
+A+ +++ G D IK WNT
Sbjct: 306 LAWCPFQASLLATGGGVGDGKIKFWNT 332
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +3
Query: 315 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 485
G L LW + HT VL +A S + + S + D+ ++LWN E
Sbjct: 364 GFTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVFGE 420
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 47.6 bits (108), Expect = 1e-05
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
GH + + +SSDG ++GS DK L++W L G + H V+ V F + +
Sbjct: 580 GHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYL 639
Query: 435 VSGSRDKTIKLWNT-LAECKYTIQDEDTAIGC 527
S +D+ +K W+ E T++ I C
Sbjct: 640 FSIGKDRLVKYWDADKFEHLLTLEGHHAEIWC 671
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/72 (31%), Positives = 37/72 (51%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
GH ++D+V G +S S DK LR+WDL + H +V SV + R +
Sbjct: 146 GHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEERYV 205
Query: 435 VSGSRDKTIKLW 470
V+GS D+ ++ +
Sbjct: 206 VTGSADQELRFY 217
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/75 (26%), Positives = 36/75 (48%)
Frame = +3
Query: 249 FIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 428
F H ++ + + G+ SGS D + LWD+ R H V + F +
Sbjct: 102 FNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGK 161
Query: 429 QIVSGSRDKTIKLWN 473
++VS S+DK +++W+
Sbjct: 162 KLVSSSKDKFLRVWD 176
Score = 41.5 bits (93), Expect = 7e-04
Identities = 25/77 (32%), Positives = 41/77 (53%)
Frame = +2
Query: 515 SDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLC 694
+D V V SP+ A I V+ D TVKV+++ + K ++ GH + + +S DG L
Sbjct: 540 NDDVLAVAISPD-AKHIAVAL-LDSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELI 597
Query: 695 ASGGKDMKAMLWDLNDG 745
+G +D +W L+ G
Sbjct: 598 VTGSQDKNLKIWGLDFG 614
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = +3
Query: 282 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 461
+ SS + G D ++R+WD G F H V ++ ++ + SGS+D I
Sbjct: 71 IASSASSLVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDI 130
Query: 462 KLWNTLAE 485
LW+ + E
Sbjct: 131 ILWDVVGE 138
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +2
Query: 566 IVSCGW-DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 736
+V+ G+ D ++++W ++N H G + + + GS+ ASG KD +LWD+
Sbjct: 78 LVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDV 135
Score = 37.1 bits (82), Expect = 0.015
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +3
Query: 279 VVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 458
V +S D + D T++++ + + K H V+ + S D IV+GS+DK
Sbjct: 546 VAISPDAKHIAVALLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKN 605
Query: 459 IKLWN-TLAECKYTI 500
+K+W +C +I
Sbjct: 606 LKIWGLDFGDCHKSI 620
Score = 35.5 bits (78), Expect = 0.047
Identities = 18/81 (22%), Positives = 36/81 (44%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 422
K+ H + V + +Y S D+ ++ WD + E H ++ +A S
Sbjct: 618 KSIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNR 677
Query: 423 NRQIVSGSRDKTIKLWNTLAE 485
+V+GS D++++ W+ E
Sbjct: 678 GDFLVTGSHDRSMRRWDRSEE 698
Score = 33.9 bits (74), Expect = 0.14
Identities = 21/77 (27%), Positives = 31/77 (40%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL 691
H D V V+F N + S G DR VK W + + GH + + +S G
Sbjct: 623 HGDSVMGVKFVRN--THYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDF 680
Query: 692 CASGGKDMKAMLWDLND 742
+G D WD ++
Sbjct: 681 LVTGSHDRSMRRWDRSE 697
Score = 32.3 bits (70), Expect = 0.44
Identities = 31/121 (25%), Positives = 50/121 (41%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GH V C+ S + +IV+ D+ +K+W L + H + V +
Sbjct: 580 GHKLPVMCIDISSD--GELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTH 637
Query: 689 LCASGGKDMKAMLWDLNDGKHLHTLTTMISSLPCASQPTDTGYVLLSDLPSRSGIWKARR 868
S GKD WD + +HL TL + + C + ++ G L++ RS RR
Sbjct: 638 YLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLA-ISNRGDFLVTGSHDRS----MRR 692
Query: 869 W 871
W
Sbjct: 693 W 693
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 629 INHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 763
I H GH + +VT+S D +L S + +W+ + G L T+
Sbjct: 400 IEHQGHRSDVRSVTLSEDNTLLMSTSHS-EVKIWNPSTGSCLRTI 443
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/72 (31%), Positives = 37/72 (51%)
Frame = +3
Query: 258 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 437
H+ I +LS Y + S DKT+++W++ K + H + V FSVD +V
Sbjct: 210 HNGHILKCLLSPANKYLATASSDKTVKIWNVDGFKLEKVLTGHQRWVWDCVFSVDGEFLV 269
Query: 438 SGSRDKTIKLWN 473
+ S D T +LW+
Sbjct: 270 TASSDMTARLWS 281
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 410
K GH ++ D V S DG + ++ S D T RLW + AGK + ++ H K + A
Sbjct: 247 KVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGHHKATVCCA 302
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = +2
Query: 554 ANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 733
AN + + D+TVK+W++ KL+ GH ++ S DG + DM A LW
Sbjct: 222 ANKYLATASSDKTVKIWNVDGFKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWS 281
Query: 734 LNDGKHL 754
+ GK +
Sbjct: 282 MPAGKEV 288
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Frame = +3
Query: 258 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 437
H++ + V D + SGS D T+++WDL A + +E V +V + +++
Sbjct: 77 HTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEYES-VAAVNTVVLHPNQTELI 135
Query: 438 SGSRDKTIKLWNTLA-ECKYTIQDE-DTAI 521
SG ++ I++W+ A C + E DTA+
Sbjct: 136 SGDQNGNIRVWDLRANSCSCELVPEVDTAV 165
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/76 (28%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Frame = +3
Query: 261 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG--KTTRRFEDHTKDVLSVAFSVDNRQI 434
SH ++ + ++ D +Y L+ + + +RL+D+ + + ++ HT +V++V F D + +
Sbjct: 36 SH-VNRLEITPDKHY-LAAACNPHIRLFDVNSNSPQPVMTYDSHTNNVMAVGFQCDAKWM 93
Query: 435 VSGSRDKTIKLWNTLA 482
SGS D T+K+W+ A
Sbjct: 94 YSGSEDGTVKIWDLRA 109
Score = 36.3 bits (80), Expect = 0.027
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 7/67 (10%)
Frame = +3
Query: 294 DGNYALSGSWDKTLRLWDLAAGKTT-------RRFEDHTKDVLSVAFSVDNRQIVSGSRD 452
DG ++ + T +W L GK T + + H +L S N+ + + S D
Sbjct: 173 DGTMVVAANNRGTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSD 232
Query: 453 KTIKLWN 473
KT+K+WN
Sbjct: 233 KTVKIWN 239
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/76 (30%), Positives = 38/76 (50%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GH D++ V+F +H NP IVS D+T+++W+ + GH+ Y+ + P
Sbjct: 91 GHLDYIRTVQF--HHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKED 148
Query: 689 LCASGGKDMKAMLWDL 736
L S D +WD+
Sbjct: 149 LVVSASLDQTVRVWDI 164
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/103 (24%), Positives = 41/103 (39%)
Frame = +2
Query: 548 NHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 727
+++ P+ VS G D +KVW+ + LGH Y+ TV + S D +
Sbjct: 60 HNSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRI 119
Query: 728 WDLNDGKHLHTLTTMISSLPCASQPTDTGYVLLSDLPSRSGIW 856
W+ + LT + CAS V+ + L +W
Sbjct: 120 WNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVW 162
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/74 (25%), Positives = 37/74 (50%)
Frame = +3
Query: 252 IGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 431
+GH +I V + + +S S D+T+R+W+ + H V+ +F
Sbjct: 90 LGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDL 149
Query: 432 IVSGSRDKTIKLWN 473
+VS S D+T+++W+
Sbjct: 150 VVSASLDQTVRVWD 163
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 333 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTI 500
++LWD G RF++H V V F VSG D IK+WN C +T+
Sbjct: 33 IQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTL 89
Score = 36.7 bits (81), Expect = 0.020
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKL-KINHL-GHSGYLNTVTVSPD 682
GH V+ F P P+IVS DR VK+W + K +++ L GH +++V
Sbjct: 202 GHDRGVNWASFHPTL--PLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAK 259
Query: 683 GSLCASGGKDMKAMLWD 733
+ S +D +WD
Sbjct: 260 QDIIVSNSEDKSIRVWD 276
Score = 36.3 bits (80), Expect = 0.027
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +3
Query: 309 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
+SG D +++W+ + H + +V F +N IVS S D+TI++WN
Sbjct: 67 VSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWN 121
Score = 35.9 bits (79), Expect = 0.035
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +3
Query: 309 LSGSWDKTLRLWDLAAGKTTR--RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
+SG+ D+ ++LW + K H +V SV F IVS S DK+I++W+
Sbjct: 220 VSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWD 276
Score = 33.5 bits (73), Expect(2) = 8e-04
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLK 628
GH+ +V C F P ++VS D+TV+VW + K K
Sbjct: 133 GHNHYVMCASFHPKE--DLVVSASLDQTVRVWDIGALKKK 170
Score = 33.5 bits (73), Expect = 0.19
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +1
Query: 73 KMSETLKLR-GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 216
+M+ET TLRGH V+ + + K D+I+S+S DK++ VW T+
Sbjct: 232 RMNETKAWEVDTLRGHMNNVSSVMFHAKQ-DIIVSNSEDKSIRVWDATK 279
Score = 32.3 bits (70), Expect = 0.44
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +3
Query: 225 QLRYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 362
Q R GH+H++ + +S S D+T+R+WD+ A K
Sbjct: 123 QSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALK 168
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 210
L GHN +V + +PK D+++S+S D+T+ VW +
Sbjct: 131 LTGHNHYVMCASFHPK-EDLVVSASLDQTVRVWDI 164
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWD 347
GH + +S V+ + + +S S DK++R+WD
Sbjct: 246 GHMNNVSSVMFHAKQDIIVSNSEDKSIRVWD 276
Score = 27.1 bits (57), Expect(2) = 8e-04
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +2
Query: 641 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGK 748
GH +N + P L SG D + LW +N+ K
Sbjct: 202 GHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETK 237
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 47.2 bits (107), Expect = 1e-05
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +3
Query: 249 FIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDN 425
F+GHS I D+ S + N LS S D ++RLW + F H V SV F+ VD+
Sbjct: 352 FLGHSGDILDISWSKN-NRLLSASVDNSVRLWQIGCEDCLGIFS-HNNYVTSVQFNPVDD 409
Query: 426 RQIVSGSRDKTIKLWNTLAECK 491
+SGS D +++W+ ++C+
Sbjct: 410 DHFISGSIDGKVRIWSA-SQCQ 430
Score = 31.5 bits (68), Expect = 0.76
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +3
Query: 360 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 470
K F H+ D+L +++S +NR ++S S D +++LW
Sbjct: 347 KPLHEFLGHSGDILDISWSKNNR-LLSASVDNSVRLW 382
Score = 28.3 bits (60), Expect = 7.1
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Frame = +3
Query: 198 RVEADQRRKQLRYTSKAFIG-----HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 362
RV+ + +K+ + S F G H I + S DG Y S D LR+W + +
Sbjct: 225 RVKVKEYKKEAKELSALFKGQEIQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVEDE 284
Query: 363 TTRRFEDH 386
R E+H
Sbjct: 285 ---RCEEH 289
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 115 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 216
HN +VT + NP D +S S D + +W ++
Sbjct: 395 HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQ 428
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 47.2 bits (107), Expect = 1e-05
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +3
Query: 249 FIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDN 425
F+GHS I D+ S + N LS S D ++RLW + F H V SV F+ VD+
Sbjct: 352 FLGHSGDILDISWSKN-NRLLSASVDNSVRLWQIGCEDCLGIFS-HNNYVTSVQFNPVDD 409
Query: 426 RQIVSGSRDKTIKLWNTLAECK 491
+SGS D +++W+ ++C+
Sbjct: 410 DHFISGSIDGKVRIWSA-SQCQ 430
Score = 31.5 bits (68), Expect = 0.76
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +3
Query: 360 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 470
K F H+ D+L +++S +NR ++S S D +++LW
Sbjct: 347 KPLHEFLGHSGDILDISWSKNNR-LLSASVDNSVRLW 382
Score = 28.3 bits (60), Expect = 7.1
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Frame = +3
Query: 198 RVEADQRRKQLRYTSKAFIG-----HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 362
RV+ + +K+ + S F G H I + S DG Y S D LR+W + +
Sbjct: 225 RVKVKEYKKEAKELSALFKGQEIQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVEDE 284
Query: 363 TTRRFEDH 386
R E+H
Sbjct: 285 ---RCEEH 289
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 115 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 216
HN +VT + NP D +S S D + +W ++
Sbjct: 395 HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQ 428
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +3
Query: 300 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI-VSGSRDKTIKL 467
N SGS DK +++WD+A GK E H K V +VA++ ++ +SGSRD+T+ L
Sbjct: 228 NIVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVL 284
Score = 37.1 bits (82), Expect = 0.015
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Frame = +3
Query: 297 GNYALSGSWDKTLRLWDLAAGKTTR------RFEDHTKDVLSVAFSVDNRQIV-SGSRDK 455
GN+ G+ + ++ +WDL R T + + F+ +NR IV SGS DK
Sbjct: 180 GNFVAIGTMESSIEIWDLDLVNEVLPCVQLGRIAGQT--LFFLTFNWENRNIVASGSEDK 237
Query: 456 TIKLWN-TLAECKYTIQDEDTAI 521
+K+W+ +CK T++ + +
Sbjct: 238 KVKVWDVATGKCKVTMEHHEKKV 260
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +2
Query: 686 SLCASGGKDMKAMLWDLNDGKHLHTLTTMISSLPCASQPTDTGYVLLSDLPSRSGIWKAR 865
++ ASG +D K +WD+ GK T+ + + T VLLS R+ + K
Sbjct: 228 NIVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVLKDG 287
Query: 866 R 868
R
Sbjct: 288 R 288
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 47.2 bits (107), Expect = 1e-05
Identities = 32/89 (35%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Frame = +3
Query: 249 FIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD----VLSVAFS 416
F GHS ++ VV S + L+GS D T R+WD GK + K V S+A
Sbjct: 197 FKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCVKVIGSQDKKSRLRVSSMALD 256
Query: 417 VDNRQIVSGSRDKTIKLWNTLA-ECKYTI 500
+V G + K + LWN A EC TI
Sbjct: 257 GSESWLVCG-QGKNLALWNLPASECVQTI 284
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +2
Query: 566 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 745
+ + D W + + K+K+ GHS YL+TV S +G +D A +WD G
Sbjct: 174 VFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTG 233
Query: 746 K 748
K
Sbjct: 234 K 234
Score = 36.7 bits (81), Expect = 0.020
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +3
Query: 324 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTI 500
D WD+ +GK F+ H+ + +V QI++GS D T ++W+ +C I
Sbjct: 180 DSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCVKVI 239
Query: 501 QDEDTAIGCHVS 536
+D VS
Sbjct: 240 GSQDKKSRLRVS 251
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 46.8 bits (106), Expect = 2e-05
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +3
Query: 246 AFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VD 422
+F GH + D+ S LS S DKT+RLWD+ + F H V V F+ +D
Sbjct: 514 SFTGHLDDVLDLSWSRS-QLLLSSSMDKTVRLWDIETQSCLKLFA-HNDYVTCVQFNPLD 571
Query: 423 NRQIVSGSRDKTIKLWN 473
+SGS D I++WN
Sbjct: 572 EDYFISGSLDAKIRIWN 588
Score = 35.5 bits (78), Expect = 0.047
Identities = 19/79 (24%), Positives = 39/79 (49%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL 691
H+D+V+CV+F+P + +S D +++W+++N ++ + + V +PDG
Sbjct: 558 HNDYVTCVQFNPLDED-YFISGSLDAKIRIWNISNRQV-VEWNDLKEMVTAVCYTPDGQA 615
Query: 692 CASGGKDMKAMLWDLNDGK 748
G + L+ D K
Sbjct: 616 AFVGSINGHCRLYSAEDCK 634
Score = 32.7 bits (71), Expect = 0.33
Identities = 19/79 (24%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +3
Query: 258 HSHFISDVVLSS-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
H+ +++ V + D +Y +SGS D +R+W++ + + + D + V +V ++ D +
Sbjct: 558 HNDYVTCVQFNPLDEDYFISGSLDAKIRIWNI-SNRQVVEWNDLKEMVTAVCYTPDGQAA 616
Query: 435 VSGSRDKTIKLWNTLAECK 491
GS + +L++ +CK
Sbjct: 617 FVGSINGHCRLYSA-EDCK 634
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 644 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 742
H G + T+ SPD L AS G+D +W++ +
Sbjct: 410 HQGGIWTMKFSPDSHLLASAGEDCAIHVWEVQE 442
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT 213
L HN +VT + NP D +S S D + +W ++
Sbjct: 555 LFAHNDYVTCVQFNPLDEDYFISGSLDAKIRIWNIS 590
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 46.8 bits (106), Expect = 2e-05
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF------S 416
GH+ ++ V S DG +GS D+T+RLWDL + +H V SVAF
Sbjct: 241 GHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAFRPPGGTG 300
Query: 417 VDNRQIVSGSRDKTIKLWN 473
V ++ S S DK++ L++
Sbjct: 301 VRAGRLASVSDDKSVSLYD 319
Score = 42.3 bits (95), Expect = 4e-04
Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = +3
Query: 255 GHSHFISDVVLSS-DGNYALSGSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNR 428
GH+ + +V S D SGS D + + D A GKT HT VLSV S D
Sbjct: 198 GHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHD-AEGKTLLGSMSGHTSWVLSVDASPDGG 256
Query: 429 QIVSGSRDKTIKLWN 473
I +GS D+T++LW+
Sbjct: 257 AIATGSSDRTVRLWD 271
Score = 41.1 bits (92), Expect = 0.001
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Frame = +2
Query: 488 QVYHPR*GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNT 664
++ H GH+ V + FSP +P ++ G D H K + + GH+ ++ +
Sbjct: 191 KLLHQLEGHNMPVRSLVFSP--VDPRVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLS 248
Query: 665 VTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLT 766
V SPDG A+G D LWDL + T++
Sbjct: 249 VDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMS 282
Score = 31.9 bits (69), Expect = 0.58
Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 3/123 (2%)
Frame = +2
Query: 512 HSDWVSCVRFSP-NHANPIIVSCG-WDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDG 685
H D V + P P ++ G D TVK+W L + GHS + + P G
Sbjct: 13 HEDSVWAATWVPATEDRPALLLTGSLDETVKLWRPDELDLVRTNTGHSLGVAALAAHPSG 72
Query: 686 SLCASGGKDMKAMLWDLNDGKHLHTLTTMISSL-PCASQPTDTGYVLLSDLPSRSGIWKA 862
+ AS D ++D++ + L S + +P T + + +W
Sbjct: 73 IIAASSSIDSFVRVFDVDTNATIAVLEAPPSEVWGMQFEPKGTILAVAGGSSASVKLWDT 132
Query: 863 RRW 871
W
Sbjct: 133 ASW 135
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 79 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 210
+E L G++ GH WV + +P I + S D+T+ +W L
Sbjct: 230 AEGKTLLGSMSGHTSWVLSVDASPD-GGAIATGSSDRTVRLWDL 272
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 46.8 bits (106), Expect = 2e-05
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHL----GHSGYLNTVTVSP 679
HS++V+CVRF+P+ + I VS D+ ++ C++ + L GH G + V+ SP
Sbjct: 186 HSNFVNCVRFAPDGSKFITVSS--DKKGIIYDGKTCEI-LGELSSDDGHKGSIYAVSWSP 242
Query: 680 DGSLCASGGKDMKAMLWDLND 742
DG + D A +WD++D
Sbjct: 243 DGKQVLTVSADKSAKIWDISD 263
Score = 40.3 bits (90), Expect = 0.002
Identities = 24/75 (32%), Positives = 35/75 (46%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GHS V P I V+CG D V + K K++ HS ++N V +PDGS
Sbjct: 142 GHSRRVLSCAIKPTRPFRI-VTCGEDFLVNFYEGPPFKFKLSSREHSNFVNCVRFAPDGS 200
Query: 689 LCASGGKDMKAMLWD 733
+ D K +++D
Sbjct: 201 KFITVSSDKKGIIYD 215
Score = 38.3 bits (85), Expect = 0.007
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Frame = +3
Query: 258 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF------EDHTKDVLSVAFSV 419
HS+F++ V + DG+ ++ S DK ++D GKT + H + +V++S
Sbjct: 186 HSNFVNCVRFAPDGSKFITVSSDKKGIIYD---GKTCEILGELSSDDGHKGSIYAVSWSP 242
Query: 420 DNRQIVSGSRDKTIKLWN 473
D +Q+++ S DK+ K+W+
Sbjct: 243 DGKQVLTVSADKSAKIWD 260
Score = 37.9 bits (84), Expect = 0.009
Identities = 20/77 (25%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKI-NHLGHSGYLNTVTVSPDGS 688
H +S +R+SP+ + + S +R VW + ++K+ N L HS +N + SP+ +
Sbjct: 490 HRGAISVIRYSPDLS--MFASADLNREAVVWDRVSREMKLKNMLYHSARINCLAWSPNST 547
Query: 689 LCASGGKDMKAMLWDLN 739
+ A+G D ++++++
Sbjct: 548 MVATGSLDTCVIVYEVD 564
Score = 31.1 bits (67), Expect = 1.0
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +3
Query: 249 FIGHSHFISDV-VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN 425
F GH +S + VL + +Y LSGS+D + W L G + T++ F+
Sbjct: 320 FSGHMKNVSSLAVLKGNADYILSGSYDGLICKWMLGRGFCGKL--QRTQNSQIKCFAAHE 377
Query: 426 RQIVSGSRDKTI 461
+IV+ D I
Sbjct: 378 EEIVTSGYDNKI 389
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLA 353
GH I V S DG L+ S DK+ ++WD++
Sbjct: 230 GHKGSIYAVSWSPDGKQVLTVSADKSAKIWDIS 262
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 46.8 bits (106), Expect = 2e-05
Identities = 29/74 (39%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQ 431
GH I D+ S LS S DKT+RLWD+ KT + H V + FS VD
Sbjct: 504 GHLDAILDLSWSKS-QLLLSSSMDKTVRLWDIET-KTCLKLFAHNDYVTCIQFSPVDENY 561
Query: 432 IVSGSRDKTIKLWN 473
+SGS D I++W+
Sbjct: 562 FLSGSLDAKIRIWS 575
Score = 33.9 bits (74), Expect = 0.14
Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = +3
Query: 237 TSKAFIGHSHFISDVVLSS-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 413
T H+ +++ + S D NY LSGS D +R+W + + + D + V + +
Sbjct: 538 TCLKLFAHNDYVTCIQFSPVDENYFLSGSLDAKIRIWSI-QDRHVVEWSDLHEMVTAACY 596
Query: 414 SVDNRQIVSGSRDKTIKLWNTLAECK 491
+ D + + GS + ++T +CK
Sbjct: 597 TPDGQGALIGSHKGICRAYDT-EDCK 621
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 610
H+D+V+C++FSP N +S D +++W +
Sbjct: 545 HNDYVTCIQFSPVDEN-YFLSGSLDAKIRIWSI 576
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +3
Query: 258 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLA-AGKTTRRFEDHTKDVLSVAFSVDNRQI 434
H+H I+DV + + S+DKT+++WD + G R H V+S+ F ++
Sbjct: 549 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTEL 608
Query: 435 V-SGSRDKTIKLWNTLAECKYTIQDEDTAI 521
+ S + I+ W+ A C ++ T +
Sbjct: 609 LCSCDSNNDIRFWDINASCVRAVKGASTQV 638
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +3
Query: 288 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 467
S DG S DK + +W++ + E+H + V F ++ Q+ + S DKTIK+
Sbjct: 517 SYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKI 576
Query: 468 WN 473
W+
Sbjct: 577 WD 578
Score = 41.9 bits (94), Expect = 5e-04
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +2
Query: 533 VRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGK 709
VRF P ++ + TV ++ + N ++N GHS +++V SP+G L AS +
Sbjct: 638 VRFQPRTGQ--FLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSE 695
Query: 710 DMKAMLWDLNDGKHLHTLT 766
D LW L+ G +H L+
Sbjct: 696 D-AVKLWSLSSGDCIHELS 713
Score = 36.7 bits (81), Expect = 0.020
Identities = 24/91 (26%), Positives = 38/91 (41%)
Frame = +3
Query: 249 FIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 428
F GHS + V S +G S S D ++LW L++G + SV F
Sbjct: 671 FKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYP 729
Query: 429 QIVSGSRDKTIKLWNTLAECKYTIQDEDTAI 521
++ + I+LWNT+ T+ + I
Sbjct: 730 DLLVIGGYQAIELWNTMENKCMTVAGHECVI 760
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +3
Query: 258 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLA-AGKTTRRFEDHTKDVLSVAFSVDNRQI 434
H+H I+DV + + S+DKT+++WD + G R H V+S+ F ++
Sbjct: 551 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTEL 610
Query: 435 V-SGSRDKTIKLWNTLAECKYTIQDEDTAI 521
+ S + I+ W+ A C ++ T +
Sbjct: 611 LCSCDSNNDIRFWDINASCVRAVKGASTQV 640
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +3
Query: 288 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 467
S DG S DK + +W++ + E+H + V F ++ Q+ + S DKTIK+
Sbjct: 519 SYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 468 WN 473
W+
Sbjct: 579 WD 580
Score = 41.9 bits (94), Expect = 5e-04
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +2
Query: 533 VRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGK 709
VRF P ++ + TV ++ + N ++N GHS +++V SP+G L AS +
Sbjct: 640 VRFQPRTGQ--FLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSE 697
Query: 710 DMKAMLWDLNDGKHLHTLT 766
D LW L+ G +H L+
Sbjct: 698 D-AVKLWSLSSGDCIHELS 715
Score = 36.7 bits (81), Expect = 0.020
Identities = 24/91 (26%), Positives = 38/91 (41%)
Frame = +3
Query: 249 FIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 428
F GHS + V S +G S S D ++LW L++G + SV F
Sbjct: 673 FKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYP 731
Query: 429 QIVSGSRDKTIKLWNTLAECKYTIQDEDTAI 521
++ + I+LWNT+ T+ + I
Sbjct: 732 DLLVIGGYQAIELWNTMENKCMTVAGHECVI 762
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +3
Query: 258 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLA-AGKTTRRFEDHTKDVLSVAFSVDNRQI 434
H+H I+DV + + S+DKT+++WD + G R H V+S+ F ++
Sbjct: 551 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTEL 610
Query: 435 V-SGSRDKTIKLWNTLAECKYTIQDEDTAI 521
+ S + I+ W+ A C ++ T +
Sbjct: 611 LCSCDSNNDIRFWDINASCVRAVKGASTQV 640
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +3
Query: 288 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 467
S DG S DK + +W++ + E+H + V F ++ Q+ + S DKTIK+
Sbjct: 519 SYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 468 WN 473
W+
Sbjct: 579 WD 580
Score = 41.9 bits (94), Expect = 5e-04
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +2
Query: 533 VRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGK 709
VRF P ++ + TV ++ + N ++N GHS +++V SP+G L AS +
Sbjct: 640 VRFQPRTGQ--FLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSE 697
Query: 710 DMKAMLWDLNDGKHLHTLT 766
D LW L+ G +H L+
Sbjct: 698 D-AVKLWSLSSGDCIHELS 715
Score = 36.7 bits (81), Expect = 0.020
Identities = 24/91 (26%), Positives = 38/91 (41%)
Frame = +3
Query: 249 FIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 428
F GHS + V S +G S S D ++LW L++G + SV F
Sbjct: 673 FKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYP 731
Query: 429 QIVSGSRDKTIKLWNTLAECKYTIQDEDTAI 521
++ + I+LWNT+ T+ + I
Sbjct: 732 DLLVIGGYQAIELWNTMENKCMTVAGHECVI 762
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +3
Query: 258 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLA-AGKTTRRFEDHTKDVLSVAFSVDNRQI 434
H+H I+DV + + S+DKT+++WD + G R H V+S+ F ++
Sbjct: 551 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTEL 610
Query: 435 V-SGSRDKTIKLWNTLAECKYTIQDEDTAI 521
+ S + I+ W+ A C ++ T +
Sbjct: 611 LCSCDSNNDIRFWDINASCVRAVKGASTQV 640
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +3
Query: 288 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 467
S DG S DK + +W++ + E+H + V F ++ Q+ + S DKTIK+
Sbjct: 519 SYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 468 WN 473
W+
Sbjct: 579 WD 580
Score = 41.9 bits (94), Expect = 5e-04
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +2
Query: 533 VRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGK 709
VRF P ++ + TV ++ + N ++N GHS +++V SP+G L AS +
Sbjct: 640 VRFQPRTGQ--FLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSE 697
Query: 710 DMKAMLWDLNDGKHLHTLT 766
D LW L+ G +H L+
Sbjct: 698 D-AVKLWSLSSGDCIHELS 715
Score = 36.7 bits (81), Expect = 0.020
Identities = 24/91 (26%), Positives = 38/91 (41%)
Frame = +3
Query: 249 FIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 428
F GHS + V S +G S S D ++LW L++G + SV F
Sbjct: 673 FKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYP 731
Query: 429 QIVSGSRDKTIKLWNTLAECKYTIQDEDTAI 521
++ + I+LWNT+ T+ + I
Sbjct: 732 DLLVIGGYQAIELWNTMENKCMTVAGHECVI 762
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +3
Query: 258 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLA-AGKTTRRFEDHTKDVLSVAFSVDNRQI 434
H+H I+DV + + S+DKT+++WD + G R H V+S+ F ++
Sbjct: 551 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTEL 610
Query: 435 V-SGSRDKTIKLWNTLAECKYTIQDEDTAI 521
+ S + I+ W+ A C ++ T +
Sbjct: 611 LCSCDSNNDIRFWDINASCVRAVKGASTQV 640
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +3
Query: 288 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 467
S DG S DK + +W++ + E+H + V F ++ Q+ + S DKTIK+
Sbjct: 519 SYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 468 WN 473
W+
Sbjct: 579 WD 580
Score = 41.9 bits (94), Expect = 5e-04
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +2
Query: 533 VRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGK 709
VRF P ++ + TV ++ + N ++N GHS +++V SP+G L AS +
Sbjct: 640 VRFQPRTGQ--FLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSE 697
Query: 710 DMKAMLWDLNDGKHLHTLT 766
D LW L+ G +H L+
Sbjct: 698 D-AVKLWSLSSGDCIHELS 715
Score = 36.7 bits (81), Expect = 0.020
Identities = 24/91 (26%), Positives = 38/91 (41%)
Frame = +3
Query: 249 FIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 428
F GHS + V S +G S S D ++LW L++G + SV F
Sbjct: 673 FKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYP 731
Query: 429 QIVSGSRDKTIKLWNTLAECKYTIQDEDTAI 521
++ + I+LWNT+ T+ + I
Sbjct: 732 DLLVIGGYQAIELWNTMENKCMTVAGHECVI 762
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Frame = +2
Query: 572 SCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKH 751
S G+D +VW L + + GH + +V SP+G ASGG+D + +WDL K
Sbjct: 147 SSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKL 206
Query: 752 LHTLTTMISSLPCAS-QPTDTGYVLLSDLPSRSGIWKAR 865
L+ + ++ + +P + ++ + IW R
Sbjct: 207 LYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGR 245
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +3
Query: 303 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
+ S +D R+WDL + F+ H K VLSV FS + + SG D ++W+
Sbjct: 144 FKASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWD 200
Score = 37.5 bits (83), Expect = 0.012
Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Frame = +3
Query: 249 FIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 428
F GH + V S +G + SG D R+WDL K H V V + R
Sbjct: 168 FQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYIIPAHVNLVSQVKYEPQER 227
Query: 429 Q-IVSGSRDKTIKLWN 473
+ + S D + +W+
Sbjct: 228 YFLATASHDMNVNIWS 243
Score = 35.1 bits (77), Expect = 0.062
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 14/114 (12%)
Frame = +3
Query: 177 LSRQNSHRVEADQRRKQ-----LRYTSKAFIGHSHFISD-----VVLSSDGNYALSGSWD 326
+ R+N R + D+ + L++ +G S F D LS DG ++ S
Sbjct: 25 IQRENRRRNDPDEDKNAETKLALKHCKDMVLGSSKFGDDRPLTGCSLSRDGKILVTCSLS 84
Query: 327 KTLRLWDLAAGKTTRRF---EDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNT 476
+LW++ + T + + H + V V FS VD+ + + S D+T K+W T
Sbjct: 85 GVPKLWEVP--QVTNKIVVLKGHKEHVTDVVFSSVDDECLATASTDRTEKIWKT 136
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 46.8 bits (106), Expect = 2e-05
Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 2/131 (1%)
Frame = +3
Query: 168 LIFLSRQNSHRV-EADQRRKQLRYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLW 344
L+ S N R E + L KA I H + DG SG DK ++W
Sbjct: 40 LVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQAKMW 99
Query: 345 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDEDTAIG 524
L +G H + ++A+ + +GS DKT+K W+T + + +
Sbjct: 100 PLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSWDKTLKYWDTRQQ--NPVHTQQLPDK 157
Query: 525 CH-VSDSHPIM 554
C+ +S HP+M
Sbjct: 158 CYTLSVKHPLM 168
Score = 35.9 bits (79), Expect = 0.035
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Frame = +3
Query: 270 ISDVVLSSDGNYALSGSWDKTLRLWDL-----AAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
IS + S + ++ SWD +R W++ + + H + VL A+ D +
Sbjct: 28 ISSLSFSPRADILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDGTTV 87
Query: 435 VSGSRDKTIKLWNTLA 482
SG DK K+W L+
Sbjct: 88 FSGGCDKQAKMWPLLS 103
Score = 35.5 bits (78), Expect = 0.047
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Frame = +2
Query: 515 SDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINH-----LGHSGYLNTVTVSP 679
+D +S + FSP I+V+ WD V+ W ++ + + H +
Sbjct: 25 ADSISSLSFSPRA--DILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKD 82
Query: 680 DGSLCASGGKDMKAMLWDLNDG 745
DG+ SGG D +A +W L G
Sbjct: 83 DGTTVFSGGCDKQAKMWPLLSG 104
Score = 32.3 bits (70), Expect = 0.44
Identities = 17/65 (26%), Positives = 27/65 (41%)
Frame = +2
Query: 566 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 745
+ S G D+ K+W L + + H G + + P +L A+G D WD
Sbjct: 87 VFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSWDKTLKYWDTRQQ 146
Query: 746 KHLHT 760
+HT
Sbjct: 147 NPVHT 151
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 46.4 bits (105), Expect = 3e-05
Identities = 21/76 (27%), Positives = 36/76 (47%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 422
K GH + + +L G Y ++GS D+ +++W + H D+ +A S +
Sbjct: 239 KRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSN 298
Query: 423 NRQIVSGSRDKTIKLW 470
N I S S D I++W
Sbjct: 299 NIFIASASNDCVIRVW 314
Score = 44.0 bits (99), Expect = 1e-04
Identities = 31/122 (25%), Positives = 51/122 (41%), Gaps = 3/122 (2%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GH + V C + + +++ DR VKVW + + GH G + + VS +
Sbjct: 243 GHRNAVYCAIL--DRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNNI 300
Query: 689 LCASGGKDMKAMLWDLNDGKHLHTL---TTMISSLPCASQPTDTGYVLLSDLPSRSGIWK 859
AS D +W L DG + L T ++++ + +P +L S IW
Sbjct: 301 FIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIWD 360
Query: 860 AR 865
AR
Sbjct: 361 AR 362
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV---DN 425
GH I+D+ +SS+ + S S D +R+W L G HT V ++AFS
Sbjct: 285 GHEGDITDLAVSSNNIFIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSP 344
Query: 426 RQIVSGSRDKTIKLWN 473
Q++S S D T ++W+
Sbjct: 345 YQLLSSSDDGTCRIWD 360
Score = 33.9 bits (74), Expect = 0.14
Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPK--YPDMILSSSRDKTLIVW 204
LRGH G VT IA +P+ P +LSSS D T +W
Sbjct: 325 LRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIW 359
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/74 (32%), Positives = 35/74 (47%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
GH+ + D+ S D + SGS D T+ +W++ G T H V V + I
Sbjct: 116 GHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGSFI 175
Query: 435 VSGSRDKTIKLWNT 476
S S DKT+ +W T
Sbjct: 176 ASQSDDKTVIIWRT 189
Score = 37.5 bits (83), Expect = 0.012
Identities = 23/83 (27%), Positives = 37/83 (44%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GH+ V + +SP+ + ++ S D TV +W++ GH + VT P GS
Sbjct: 116 GHTADVVDLNWSPDDS--MLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGS 173
Query: 689 LCASGGKDMKAMLWDLNDGKHLH 757
AS D ++W +D H
Sbjct: 174 FIASQSDDKTVIIWRTSDWGMAH 196
Score = 36.7 bits (81), Expect = 0.020
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 345 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
D+ K HT DV+ + +S D+ + SGS D T+ +WN
Sbjct: 104 DVENWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWN 146
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/86 (22%), Positives = 33/86 (38%)
Frame = +2
Query: 614 NCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLTTMISSLPCA 793
N K + GH+ + + SPD S+ ASG D +W++ G L +S +
Sbjct: 107 NWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGV 166
Query: 794 SQPTDTGYVLLSDLPSRSGIWKARRW 871
+ ++ IW+ W
Sbjct: 167 TWDPIGSFIASQSDDKTVIIWRTSDW 192
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 207
LRGH V + +P I S S DKT+I+W+
Sbjct: 156 LRGHLSLVKGVTWDP-IGSFIASQSDDKTVIIWR 188
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 46.4 bits (105), Expect = 3e-05
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +3
Query: 300 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWN 473
NY S +D +++WD G+ ++ +H K SV FS D + VSGS D ++KLW+
Sbjct: 779 NYLASTDYDGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLWS 837
Score = 35.9 bits (79), Expect = 0.035
Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +3
Query: 279 VVLSSDGNYALS-GSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGSRD 452
V SS N+ L+ GS D + +DL KT H K V V F +D+ IVS S D
Sbjct: 856 VQFSSYSNHLLAFGSADYKVYCYDLRYVKTPWCTLAGHEKAVSYVKF-MDSETIVSASTD 914
Query: 453 KTIKLWN 473
++KLWN
Sbjct: 915 NSLKLWN 921
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 46.4 bits (105), Expect = 3e-05
Identities = 25/73 (34%), Positives = 38/73 (52%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL 691
HSD VSC+ + + ++ S WDRTVKVW + + K + H +N+VT + SL
Sbjct: 134 HSDAVSCLSLAEDQG--LLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSVTTAE--SL 189
Query: 692 CASGGKDMKAMLW 730
+G D +W
Sbjct: 190 VFTGSADGTVKVW 202
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/80 (30%), Positives = 40/80 (50%)
Frame = +3
Query: 231 RYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 410
R + +I HS +S + L+ D S SWD+T+++W + K + H V SV
Sbjct: 125 RCRTALWIKHSDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSV- 183
Query: 411 FSVDNRQIVSGSRDKTIKLW 470
+ + +GS D T+K+W
Sbjct: 184 -TTAESLVFTGSADGTVKVW 202
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 46.0 bits (104), Expect = 3e-05
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED-HTK-DVLSVAFSVDNR 428
G S I+ V SS G+ ++ S D +RL+D + K R + H K +V S F+ D R
Sbjct: 172 GVSGAINQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQR 231
Query: 429 QIVSGSRDKTIKLW 470
++S +D T+KLW
Sbjct: 232 FVLSSGKDSTVKLW 245
Score = 28.3 bits (60), Expect = 7.1
Identities = 20/99 (20%), Positives = 39/99 (39%), Gaps = 2/99 (2%)
Frame = +2
Query: 458 YQTLEHPCGVQVYHPR*GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH--LTNCKLKI 631
Y + C + P G S ++ VR+S + I ++ D ++++ C I
Sbjct: 155 YDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGS--IYITASKDGAIRLFDGVSAKCVRSI 212
Query: 632 NHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGK 748
+ + + + D S GKD LW++ G+
Sbjct: 213 GNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWEIGSGR 251
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 46.0 bits (104), Expect = 3e-05
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED-HTK-DVLSVAFSVDNR 428
G S I+ V SS G+ ++ S D +RL+D + K R + H K +V S F+ D R
Sbjct: 264 GVSGAINQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQR 323
Query: 429 QIVSGSRDKTIKLW 470
++S +D T+KLW
Sbjct: 324 FVLSSGKDSTVKLW 337
Score = 28.3 bits (60), Expect = 7.1
Identities = 20/99 (20%), Positives = 39/99 (39%), Gaps = 2/99 (2%)
Frame = +2
Query: 458 YQTLEHPCGVQVYHPR*GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH--LTNCKLKI 631
Y + C + P G S ++ VR+S + I ++ D ++++ C I
Sbjct: 247 YDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGS--IYITASKDGAIRLFDGVSAKCVRSI 304
Query: 632 NHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGK 748
+ + + + D S GKD LW++ G+
Sbjct: 305 GNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWEIGSGR 343
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 46.0 bits (104), Expect = 3e-05
Identities = 30/91 (32%), Positives = 47/91 (51%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL 691
H+D +SC+ HA II S WD+T+KVW L++ K + H +N + V+ DG +
Sbjct: 173 HADSISCLAV---HAG-IIYSGSWDKTLKVWRLSDLKCLESIKAHDDAINGL-VAGDGRV 227
Query: 692 CASGGKDMKAMLWDLNDGKHLHTLTTMISSL 784
S D K +W K + + ++ SSL
Sbjct: 228 -YSASADGKVKIWGKEKRKQIESTSSSSSSL 257
Score = 41.1 bits (92), Expect = 0.001
Identities = 26/80 (32%), Positives = 42/80 (52%)
Frame = +3
Query: 231 RYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 410
R + +I H+ IS + + + Y SGSWDKTL++W L+ K + H D ++
Sbjct: 164 RNHKRLWIEHADSISCLAVHAGIIY--SGSWDKTLKVWRLSDLKCLESIKAH-DDAINGL 220
Query: 411 FSVDNRQIVSGSRDKTIKLW 470
+ D R + S S D +K+W
Sbjct: 221 VAGDGR-VYSASADGKVKIW 239
Score = 32.3 bits (70), Expect = 0.44
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 7/74 (9%)
Frame = +3
Query: 270 ISDVVLSSDGNYALSGS-------WDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 428
++ VV+S DGN+ G W+K + D + H VL + V
Sbjct: 272 VNSVVVSGDGNWVYGGGSDGFVIGWEKKEKEGDFEEWRLGFETRGHNMAVLCMC--VVGE 329
Query: 429 QIVSGSRDKTIKLW 470
+ SGS DK+I LW
Sbjct: 330 MVCSGSADKSIGLW 343
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 46.0 bits (104), Expect = 3e-05
Identities = 23/66 (34%), Positives = 33/66 (50%)
Frame = +3
Query: 273 SDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRD 452
S + ++SDG G D +++L KT H V +A S DN +V+GSRD
Sbjct: 2630 SVIAITSDGEIITGGHADNSIKLVSSDGAKTLETAFGHCAPVTCLALSPDNNFLVTGSRD 2689
Query: 453 KTIKLW 470
T+ LW
Sbjct: 2690 STVLLW 2695
Score = 32.7 bits (71), Expect = 0.33
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 237 TSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR 371
T + GH ++ + LS D N+ ++GS D T+ LW + T+R
Sbjct: 2660 TLETAFGHCAPVTCLALSPDNNFLVTGSRDSTVLLWRIHKAFTSR 2704
Score = 31.5 bits (68), Expect = 0.76
Identities = 18/89 (20%), Positives = 38/89 (42%)
Frame = +2
Query: 584 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 763
D ++K+ K GH + + +SPD + +G +D +LW ++ K +
Sbjct: 2647 DNSIKLVSSDGAKTLETAFGHCAPVTCLALSPDNNFLVTGSRDSTVLLWRIH--KAFTSR 2704
Query: 764 TTMISSLPCASQPTDTGYVLLSDLPSRSG 850
T++ + P+ T L++ + G
Sbjct: 2705 TSVSEPSTGSGAPSSTSNTNLANTLANKG 2733
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +1
Query: 79 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 210
S+ K T GH VT +A +P + +++ SRD T+++W++
Sbjct: 2655 SDGAKTLETAFGHCAPVTCLALSPDN-NFLVTGSRDSTVLLWRI 2697
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 45.6 bits (103), Expect = 4e-05
Identities = 36/143 (25%), Positives = 67/143 (46%), Gaps = 7/143 (4%)
Frame = +3
Query: 147 SEIPGHDLIFLSRQNSHRVEADQRRKQLRYTSKAFIGHSHFISDVVLSSDGNYALSGSWD 326
S + G DL+F Q+ + + A + H ++ V L N SGS D
Sbjct: 235 SLVVGTDLLFAGTQDGSILAWRYNAATNCFEPSASLT-GHTLAVVTLYVGANRLYSGSMD 293
Query: 327 KTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL----AECKY 494
KT+++W L + + DH+ V+S+ ++ ++S S D T+K+W + E Y
Sbjct: 294 KTIKVWSLDNLQCIQTLTDHSSVVMSLI--CWDQFLLSCSLDNTVKIWAAIEGGNLEVTY 351
Query: 495 TIQDEDTAI---GCHVSDSHPIM 554
T ++E + G H +++ P++
Sbjct: 352 THKEEHGVLALCGVHDAEAKPVL 374
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTT 368
GH +S + L S + +GS D+TLR+WD A+G+ T
Sbjct: 149 GHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCT 186
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/56 (23%), Positives = 30/56 (53%)
Frame = +3
Query: 372 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDEDTAIGCHVSD 539
+ + H K V +A + ++ +GS+D+T+++W+ + + IGC +S+
Sbjct: 146 QLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCTGVLKLGGEIGCVLSE 201
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1
Query: 82 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 204
E+ L L GH V+ IA P D + + S+D+TL VW
Sbjct: 139 ESFALLTQLDGHEKLVSGIAL-PSGSDKLYTGSKDETLRVW 178
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 44.8 bits (101), Expect = 8e-05
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Frame = +3
Query: 276 DVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDK 455
D++ S D +G D T L+D +G+ H+K V SV F D+ +++ S DK
Sbjct: 229 DILHSKD--VIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADK 286
Query: 456 TIKLWNTLAE----CKYTIQDEDTAI 521
T+++W + C YT+ D +
Sbjct: 287 TVRIWRNPGDGNYACGYTLNDHSAEV 312
Score = 41.5 bits (93), Expect = 7e-04
Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 7/105 (6%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLW------DLAAGKTTRRFEDHTKDVLSVAFS 416
GHS ++ V D + L+ S DKT+R+W + A G T DH+ +V +V
Sbjct: 262 GHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYT---LNDHSAEVRAVTVH 318
Query: 417 VDNRQIVSGSRDKTIKLWN-TLAECKYTIQDEDTAIGCHVSDSHP 548
N+ VS S D T ++ + C + D+ + + HP
Sbjct: 319 PTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHP 363
Score = 36.7 bits (81), Expect = 0.020
Identities = 14/60 (23%), Positives = 35/60 (58%)
Frame = +3
Query: 294 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
DG +G+ +++WD+ + +F+ HT +V +++FS +N ++ + + ++LW+
Sbjct: 364 DGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFS-ENGYFLATAAEDGVRLWD 422
Score = 34.3 bits (75), Expect = 0.11
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 5/100 (5%)
Frame = +2
Query: 470 EHPCGVQVYHPR*GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTN-----CKLKIN 634
+ P G Q+ GHS V+ V+F + + ++++ D+TV++W C +N
Sbjct: 250 DRPSG-QILSTLTGHSKKVTSVKFVGD--SDLVLTASADKTVRIWRNPGDGNYACGYTLN 306
Query: 635 HLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHL 754
HS + VTV P S D +DL+ G L
Sbjct: 307 D--HSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCL 344
Score = 31.9 bits (69), Expect = 0.58
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 766 HNDIITALCFSTNRYWLCAAFGPSIKIWDL 855
H +TA+ FS N Y+L A +++WDL
Sbjct: 394 HTGEVTAISFSENGYFLATAAEDGVRLWDL 423
Score = 31.5 bits (68), Expect = 0.76
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 551 HANPIIVSCGWDRTV-KVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 727
H + +I+ G ++V K+W + + GH+G + ++ S +G A+ +D L
Sbjct: 362 HPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED-GVRL 420
Query: 728 WDL 736
WDL
Sbjct: 421 WDL 423
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +1
Query: 91 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN 225
++ TL GH+ VT + D++L++S DKT+ +W+ D N
Sbjct: 255 QILSTLTGHSKKVTSVKFVGD-SDLVLTASADKTVRIWRNPGDGN 298
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +2
Query: 695 ASGGKDMKAMLWDLNDGKHLHTLTTMISSLPCASQPTDTGYVLLSDLPSRSGIWK 859
A+GG D A+L+D G+ L TLT + D+ VL + IW+
Sbjct: 238 ATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWR 292
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 44.8 bits (101), Expect = 8e-05
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Frame = +3
Query: 276 DVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDK 455
D++ S D +G D T L+D +G+ H+K V SV F D+ +++ S DK
Sbjct: 229 DILHSKD--VIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADK 286
Query: 456 TIKLWNTLAE----CKYTIQDEDTAI 521
T+++W + C YT+ D +
Sbjct: 287 TVRIWRNPGDGNYACGYTLNDHSAEV 312
Score = 41.5 bits (93), Expect = 7e-04
Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 7/105 (6%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLW------DLAAGKTTRRFEDHTKDVLSVAFS 416
GHS ++ V D + L+ S DKT+R+W + A G T DH+ +V +V
Sbjct: 262 GHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYT---LNDHSAEVRAVTVH 318
Query: 417 VDNRQIVSGSRDKTIKLWN-TLAECKYTIQDEDTAIGCHVSDSHP 548
N+ VS S D T ++ + C + D+ + + HP
Sbjct: 319 PTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHP 363
Score = 36.7 bits (81), Expect = 0.020
Identities = 14/60 (23%), Positives = 35/60 (58%)
Frame = +3
Query: 294 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
DG +G+ +++WD+ + +F+ HT +V +++FS +N ++ + + ++LW+
Sbjct: 364 DGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFS-ENGYFLATAAEDGVRLWD 422
Score = 34.3 bits (75), Expect = 0.11
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 5/100 (5%)
Frame = +2
Query: 470 EHPCGVQVYHPR*GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTN-----CKLKIN 634
+ P G Q+ GHS V+ V+F + + ++++ D+TV++W C +N
Sbjct: 250 DRPSG-QILSTLTGHSKKVTSVKFVGD--SDLVLTASADKTVRIWRNPGDGNYACGYTLN 306
Query: 635 HLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHL 754
HS + VTV P S D +DL+ G L
Sbjct: 307 D--HSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCL 344
Score = 31.9 bits (69), Expect = 0.58
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 766 HNDIITALCFSTNRYWLCAAFGPSIKIWDL 855
H +TA+ FS N Y+L A +++WDL
Sbjct: 394 HTGEVTAISFSENGYFLATAAEDGVRLWDL 423
Score = 31.5 bits (68), Expect = 0.76
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 551 HANPIIVSCGWDRTV-KVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 727
H + +I+ G ++V K+W + + GH+G + ++ S +G A+ +D L
Sbjct: 362 HPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED-GVRL 420
Query: 728 WDL 736
WDL
Sbjct: 421 WDL 423
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +1
Query: 91 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN 225
++ TL GH+ VT + D++L++S DKT+ +W+ D N
Sbjct: 255 QILSTLTGHSKKVTSVKFVGD-SDLVLTASADKTVRIWRNPGDGN 298
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +2
Query: 695 ASGGKDMKAMLWDLNDGKHLHTLTTMISSLPCASQPTDTGYVLLSDLPSRSGIWK 859
A+GG D A+L+D G+ L TLT + D+ VL + IW+
Sbjct: 238 ATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWR 292
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 44.8 bits (101), Expect = 8e-05
Identities = 23/87 (26%), Positives = 42/87 (48%)
Frame = +3
Query: 252 IGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 431
+GH +I V + + +S S D+T+R+W+ + H V+ +F
Sbjct: 90 LGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDL 149
Query: 432 IVSGSRDKTIKLWNTLAECKYTIQDED 512
+VS S D+T+++W+ A K T+ D
Sbjct: 150 VVSASLDQTVRVWDIGALRKKTVSPAD 176
Score = 44.8 bits (101), Expect = 8e-05
Identities = 22/76 (28%), Positives = 37/76 (48%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GH D++ V+F +H P IVS D+T+++W+ + GH+ Y+ + P
Sbjct: 91 GHLDYIRTVQF--HHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKED 148
Query: 689 LCASGGKDMKAMLWDL 736
L S D +WD+
Sbjct: 149 LVVSASLDQTVRVWDI 164
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/103 (25%), Positives = 42/103 (40%)
Frame = +2
Query: 548 NHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 727
+++ P+ VS G D +KVW+ N + LGH Y+ TV + S D +
Sbjct: 60 HNSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRI 119
Query: 728 WDLNDGKHLHTLTTMISSLPCASQPTDTGYVLLSDLPSRSGIW 856
W+ + LT + CAS V+ + L +W
Sbjct: 120 WNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVW 162
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +3
Query: 333 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
++LWD G RF++H V V F VSG D IK+WN
Sbjct: 33 IQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWN 79
Score = 37.5 bits (83), Expect = 0.012
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKL-KINHL-GHSGYLNTVTVSPD 682
GH V+ F P P+IVS DR VK+W + K +++ L GH +++V
Sbjct: 202 GHDRGVNWAAFHPTL--PLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAK 259
Query: 683 GSLCASGGKDMKAMLWDLNDGKHLHT 760
+ S +D +WD L T
Sbjct: 260 QDIIVSNSEDKSIRVWDATKRTGLQT 285
Score = 35.9 bits (79), Expect = 0.035
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +3
Query: 309 LSGSWDKTLRLWDLAAGKTTR--RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
+SG+ D+ ++LW + K H +V SV F IVS S DK+I++W+
Sbjct: 220 VSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWD 276
Score = 33.5 bits (73), Expect = 0.19
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +1
Query: 73 KMSETLKLR-GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 216
+M+ET TLRGH V+ + + K D+I+S+S DK++ VW T+
Sbjct: 232 RMNETKAWEVDTLRGHMNNVSSVMFHAKQ-DIIVSNSEDKSIRVWDATK 279
Score = 32.3 bits (70), Expect = 0.44
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +3
Query: 309 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
+SG D +++W+ + H + +V F + IVS S D+TI++WN
Sbjct: 67 VSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
Score = 31.9 bits (69), Expect = 0.58
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +3
Query: 225 QLRYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAA 356
Q R GH+H++ + +S S D+T+R+WD+ A
Sbjct: 123 QSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA 166
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 210
L GHN +V + +PK D+++S+S D+T+ VW +
Sbjct: 131 LTGHNHYVMCASFHPK-EDLVVSASLDQTVRVWDI 164
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWD 347
GH + +S V+ + + +S S DK++R+WD
Sbjct: 246 GHMNNVSSVMFHAKQDIIVSNSEDKSIRVWD 276
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 44.4 bits (100), Expect = 1e-04
Identities = 23/80 (28%), Positives = 38/80 (47%)
Frame = +3
Query: 258 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 437
H+ +S + L + S SWD T+++W +A K H + SV D+ +
Sbjct: 234 HNDAVSSLSLDVELGLLYSSSWDTTIKVWRIADSKCLESIHAHDDAINSVMSGFDD-LVF 292
Query: 438 SGSRDKTIKLWNTLAECKYT 497
+GS D T+K+W + K T
Sbjct: 293 TGSADGTVKVWKRELQGKGT 312
Score = 34.7 bits (76), Expect = 0.082
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL 691
H+D VS + ++ S WD T+KVW + + K + H +N+V +S L
Sbjct: 234 HNDAVSSLSLDVELG--LLYSSSWDTTIKVWRIADSKCLESIHAHDDAINSV-MSGFDDL 290
Query: 692 CASGGKDMKAMLW--DLNDGKHLHTLTTMI 775
+G D +W +L HTL ++
Sbjct: 291 VFTGSADGTVKVWKRELQGKGTKHTLAQVL 320
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 44.4 bits (100), Expect = 1e-04
Identities = 23/77 (29%), Positives = 39/77 (50%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 422
K GHS ++D SS+ Y S S DKT+R+W+L+ G R + V+
Sbjct: 210 KQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCIRVIYGISPQYCIRFHPVN 269
Query: 423 NRQIVSGSRDKTIKLWN 473
N + +G+ +K + ++N
Sbjct: 270 NNFLSAGNANKELTVFN 286
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +1
Query: 106 LRGHNGWVTQI--ATNPKYPDMILSSSRDKTLIVWKLTR 216
L GH+ VT ++N +Y I SSS DKT+ VW+L+R
Sbjct: 212 LTGHSKDVTDFDFSSNNQY---IASSSLDKTIRVWELSR 247
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLT 613
GHS V+ FS N N I S D+T++VW L+
Sbjct: 214 GHSKDVTDFDFSSN--NQYIASSSLDKTIRVWELS 246
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/75 (32%), Positives = 36/75 (48%)
Frame = +3
Query: 249 FIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 428
F GH +S V S+ A S S D TLRLWD+ R F HT + V +V++
Sbjct: 545 FSGHKKAVSYVKFLSNNELA-SASTDSTLRLWDVKDNLPVRTFRGHTNEKNFVGLTVNSE 603
Query: 429 QIVSGSRDKTIKLWN 473
+ GS + +++
Sbjct: 604 YLACGSETNEVYVYH 618
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +3
Query: 300 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNT 476
N+ S ++ + +WD+ ++ +E+H K SV FS + +VSGS D +K+W T
Sbjct: 434 NHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCT 493
Query: 477 LAECKYTIQDEDTAIGC 527
E D I C
Sbjct: 494 RQEASVINIDMKANICC 510
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = +3
Query: 303 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 482
Y+ WD +LRL L K R F+ H V+S++ +SGS D+T+ LW+
Sbjct: 92 YSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQRV 151
Query: 483 E 485
E
Sbjct: 152 E 152
Score = 32.3 bits (70), Expect = 0.44
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +3
Query: 222 KQLRYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 347
K LRY F GH + + L S G +SGS D+T+ LWD
Sbjct: 111 KYLRY----FKGHHDRVVSLSLCSGGECFISGSLDRTVLLWD 148
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +2
Query: 548 NHANPIIVSC--GWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKA 721
+H +I S GWD ++++ L + K GH + ++++ G SG D
Sbjct: 85 SHPTTVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTV 144
Query: 722 MLWD 733
+LWD
Sbjct: 145 LLWD 148
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = +3
Query: 303 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 482
Y+ WD +LRL L K R F+ H V+S++ +SGS D+T+ LW+
Sbjct: 89 YSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQRV 148
Query: 483 E 485
E
Sbjct: 149 E 149
Score = 32.3 bits (70), Expect = 0.44
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +3
Query: 222 KQLRYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 347
K LRY F GH + + L S G +SGS D+T+ LWD
Sbjct: 108 KYLRY----FKGHHDRVVSLSLCSGGECFISGSLDRTVLLWD 145
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +2
Query: 548 NHANPIIVSC--GWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKA 721
+H +I S GWD ++++ L + K GH + ++++ G SG D
Sbjct: 82 SHPTTVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTV 141
Query: 722 MLWD 733
+LWD
Sbjct: 142 LLWD 145
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 43.6 bits (98), Expect = 2e-04
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = +3
Query: 324 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL 479
D +RL+D+ K R F HT + + FS D + ++S S D ++++W+ +
Sbjct: 536 DFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDVI 587
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 362
+ F GH+ I+D+ S DG + +S S D +LR+WD+ K
Sbjct: 551 REFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDVILAK 590
Score = 32.7 bits (71), Expect = 0.33
Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 8/99 (8%)
Frame = +2
Query: 515 SDW-VSC--VRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDG 685
S W V C V+ + N ++ + D ++++ + K+ GH+ + + S DG
Sbjct: 510 SQWDVGCSLVKIVYHRVNGLLATVADDFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDG 569
Query: 686 SLCASGGKDMKAMLWDL-----NDGKHLHTLTTMISSLP 787
S D +WD+ DG H+ T +S P
Sbjct: 570 KWVISSSMDGSLRIWDVILAKQIDGVHVDVPITALSLSP 608
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +1
Query: 766 HNDIITALCFSTNRYW-LCAAFGPSIKIWDL 855
H D IT LCFS + W + ++ S++IWD+
Sbjct: 556 HTDRITDLCFSEDGKWVISSSMDGSLRIWDV 586
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +1
Query: 772 DIITALCFSTNRYWLCAAFGPSIKIWDLESKEM 870
++I C STN + A + +K+WD + +E+
Sbjct: 476 EVIGVACDSTNTLMISAGYHGDLKVWDFKKREL 508
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/77 (29%), Positives = 38/77 (49%)
Frame = +3
Query: 267 FISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 446
F D++ S D +G D T L+D +G+ H+K V S+ F D +++ S
Sbjct: 226 FSMDILHSKD--VIATGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTAS 283
Query: 447 RDKTIKLWNTLAECKYT 497
DKT+++W + YT
Sbjct: 284 SDKTVRIWGCSEDGNYT 300
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAA-GKTTRR--FEDHTKDVLSVAFSVDN 425
GHS ++ + D + L+ S DKT+R+W + G T R +DH+ +V +V N
Sbjct: 262 GHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVRAVTVHATN 321
Query: 426 RQIVSGSRDKT 458
+ VS S D T
Sbjct: 322 KYFVSASLDST 332
Score = 32.7 bits (71), Expect = 0.33
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +2
Query: 551 HANPIIVSCGWDRT-VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 727
H + +I+ G ++ VK+W + + GH+G + +++ S +G A+ D L
Sbjct: 363 HPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALD-GVRL 421
Query: 728 WDLNDGKHLHT 760
WDL K+ T
Sbjct: 422 WDLRKLKNFRT 432
Score = 32.7 bits (71), Expect = 0.33
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 766 HNDIITALCFSTNRYWLCAAFGPSIKIWDL 855
HN IT++ FS N Y+L A +++WDL
Sbjct: 395 HNGEITSISFSENGYFLATAALDGVRLWDL 424
Score = 31.9 bits (69), Expect = 0.58
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Frame = +2
Query: 470 EHPCGVQVYHPR*GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLT---NCKLKINHL 640
+ P G Q+ GHS V+ ++F + ++++ D+TV++W + N +
Sbjct: 250 DRPSG-QILSTLTGHSKKVTSIKFVGD--TDLVLTASSDKTVRIWGCSEDGNYTSRHTLK 306
Query: 641 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLT 766
HS + VTV S D +DL+ G L +T
Sbjct: 307 DHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVT 348
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 91 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN 225
++ TL GH+ VT I D++L++S DKT+ +W + D N
Sbjct: 255 QILSTLTGHSKKVTSIKFVGD-TDLVLTASSDKTVRIWGCSEDGN 298
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +2
Query: 695 ASGGKDMKAMLWDLNDGKHLHTLTTMISSLPCASQPTDTGYVLLSDLPSRSGIW 856
A+GG D A+L+D G+ L TLT + DT VL + IW
Sbjct: 238 ATGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIW 291
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = +3
Query: 288 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 467
SSDG S DK LW K E+HT + + FS ++ + S DKT+++
Sbjct: 660 SSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRV 719
Query: 468 WN 473
W+
Sbjct: 720 WD 721
Score = 38.3 bits (85), Expect = 0.007
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +3
Query: 258 HSHFISDVVLSSDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAF-SVDNRQ 431
H+ I+D+ S + S+DKT+R+WD G + R F H+ V S+ F + +
Sbjct: 692 HTAMITDIRFSPSQLRLATSSFDKTVRVWDADNKGYSLRTFMGHSSMVTSLDFHPIKDDL 751
Query: 432 IVSGSRDKTIKLWN 473
I S D I+ W+
Sbjct: 752 ICSCDNDNEIRYWS 765
Score = 31.5 bits (68), Expect = 0.76
Identities = 18/68 (26%), Positives = 35/68 (51%)
Frame = +2
Query: 527 SCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG 706
SCV F P + + +++ C +++++W+++ K + H G + ++ VS L AS
Sbjct: 867 SCV-FHPAYPSLLVIGCY--QSLELWNMSENKT-MTLPAHEGLITSLAVSTATGLVASAS 922
Query: 707 KDMKAMLW 730
D LW
Sbjct: 923 HDKLVKLW 930
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +2
Query: 674 SPDGSLCASGGKDMKAMLWDLNDGKHLHTL---TTMISSL 784
S DG + AS G D KA+LW + K TL T MI+ +
Sbjct: 660 SSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDI 699
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/71 (26%), Positives = 30/71 (42%)
Frame = +2
Query: 533 VRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 712
+RF P + S V V + ++ + GH+ +N+V P G AS +D
Sbjct: 782 IRFQPRVGKYLAASSA--NLVNVLDVETQAIRHSLQGHANPINSVCWDPSGDFLASVSED 839
Query: 713 MKAMLWDLNDG 745
M +W L G
Sbjct: 840 M-VKVWTLGTG 849
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 43.2 bits (97), Expect = 2e-04
Identities = 32/120 (26%), Positives = 49/120 (40%), Gaps = 3/120 (2%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GHS V F P I +CG D V + K +H HS ++N + SPDG+
Sbjct: 6 GHSRRVLSCAFKPTRPFRI-ATCGEDFLVNFYDGPPFKFHSSHREHSNFVNCIRYSPDGT 64
Query: 689 LCASGGKDMKAMLWDLNDGKHLHTLTT---MISSLPCASQPTDTGYVLLSDLPSRSGIWK 859
+ D K M++D G + L + S+ S D+ VL + +W+
Sbjct: 65 KFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPDSKRVLTVSADKSAKVWE 124
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +3
Query: 258 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF--ED-HTKDVLSVAFSVDNR 428
HS+F++ + S DG ++ S DK ++D G ED H + +V++S D++
Sbjct: 50 HSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPDSK 109
Query: 429 QIVSGSRDKTIKLW 470
++++ S DK+ K+W
Sbjct: 110 RVLTVSADKSAKVW 123
Score = 35.9 bits (79), Expect = 0.035
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH-LTNCKLK--INHLGHSGYLNTVTVSPD 682
HS++V+C+R+SP+ I VS D+ ++ T K+ + GH G + V+ SPD
Sbjct: 50 HSNFVNCIRYSPDGTKFITVSS--DKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPD 107
Query: 683 GSLCASGGKDMKAMLWDL-NDG 745
+ D A +W++ DG
Sbjct: 108 SKRVLTVSADKSAKVWEVAEDG 129
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 644 HSGYLNTVTVSPDGSLCASGGKDMKAMLWD 733
H G L + SPD ++ ASG + +A++WD
Sbjct: 355 HRGALTVIRYSPDLTMFASGDANREAVVWD 384
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 42.7 bits (96), Expect = 3e-04
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 8/108 (7%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
GHS ++ + G SGS DKT+++WDL + + HT V S+ ++ +
Sbjct: 256 GHSGEVTCFAVG--GQMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSLL--CWDKCL 311
Query: 435 VSGSRDKTIKLW----NTLAECKYTIQDEDTAI----GCHVSDSHPIM 554
+S S D TIK+W N + + T + E +++ G H +++ PI+
Sbjct: 312 ISSSLDGTIKVWAYSENGILKVVQTRRQEQSSVHALSGMHDAEAKPII 359
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 79 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 210
S+ K +L GH+G VT A + M+ S S DKT+ +W L
Sbjct: 245 SDPFKYLTSLEGHSGEVTCFAVGGQ---MLYSGSVDKTIKMWDL 285
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +2
Query: 641 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL---TTMISSLPC 790
GHSG + V G + SG D +WDLN + + TL T ++SL C
Sbjct: 256 GHSGEVTCFAVG--GQMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSLLC 306
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 42.3 bits (95), Expect = 4e-04
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 3/131 (2%)
Frame = +3
Query: 180 SRQNSHRVEADQRRKQLRYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG 359
+R S+R A + + K H ++ V ++DG+ LSGS D+ + LWD
Sbjct: 28 NRSFSNRFSASEDLLRRLGLDKKLDKHKGCVNTVSFNADGDILLSGSDDRQVILWDWQTA 87
Query: 360 KTTRRFED-HTKDVLSVAFS--VDNRQIVSGSRDKTIKLWNTLAECKYTIQDEDTAIGCH 530
F+ H ++ F D+R IV+ + DK ++ ++ + E + Q E + +G H
Sbjct: 88 SVKLSFDSGHFNNIFQAKFMPFSDDRTIVTSAADKQVR-YSKILE---SGQVETSLLGKH 143
Query: 531 VSDSHPIMPTP 563
H + P
Sbjct: 144 QGPVHKLAVEP 154
Score = 35.1 bits (77), Expect = 0.062
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 644 HSGYLNTVTVSPDGSLCASGGKDMKAMLWD 733
H G +NTV+ + DG + SG D + +LWD
Sbjct: 54 HKGCVNTVSFNADGDILLSGSDDRQVILWD 83
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 42.3 bits (95), Expect = 4e-04
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK--DVLSVAFS--VD 422
GH H + DV + +GS D LR+WD + H++ VL+VA S +
Sbjct: 15 GHRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHSRANGVLAVAASPWLG 74
Query: 423 NRQIVSGSRDKTIKLWN 473
+I+S RD T+K W+
Sbjct: 75 EDKIISQGRDGTVKCWD 91
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +3
Query: 270 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 449
+S + DG A + WD +R+++ G + H +V++S D + S S
Sbjct: 311 VSGTSIRVDGKIAATAGWDHRIRVYNYRKGNALAILKYHRATCNAVSYSPDCELMASASE 370
Query: 450 DKTIKLW 470
D T+ LW
Sbjct: 371 DATVALW 377
Score = 35.9 bits (79), Expect = 0.035
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = +2
Query: 563 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 736
I + GWD ++V++ H N V+ SPD L AS +D LW L
Sbjct: 322 IAATAGWDHRIRVYNYRKGNALAILKYHRATCNAVSYSPDCELMASASEDATVALWKL 379
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 42.3 bits (95), Expect = 4e-04
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW----HLTNCKLKINHLGHSGYLNTVTVS 676
GH D+V C SP + + ++V+ +D TVKVW H +N +IN H + V
Sbjct: 176 GHKDYVRCGDCSPVN-DSMLVTGSYDHTVKVWDARVHTSNWIAEIN---HGLPVEDVVYL 231
Query: 677 PDGSLCA-SGGKDMKAMLWDLNDG 745
P G L A +GG +K +WDL G
Sbjct: 232 PSGGLIATAGGNSVK--VWDLIGG 253
Score = 33.9 bits (74), Expect = 0.14
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 566 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWD 733
+VS G D VK W + + + LGH Y+ SP + S+ +G D +WD
Sbjct: 151 LVSGGDDGVVKYWDVAGATVISDLLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVWD 207
Score = 31.9 bits (69), Expect = 0.58
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +3
Query: 294 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLW 470
D + +SG D ++ WD+A H V S V++ +V+GS D T+K+W
Sbjct: 147 DKLHLVSGGDDGVVKYWDVAGATVISDLLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVW 206
Query: 471 N 473
+
Sbjct: 207 D 207
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 41.9 bits (94), Expect = 5e-04
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWD--LAAGKTT----RRFEDHTKDVLS 404
+ + GH+ + + S G SG D + +WD +A+ +T R E+HT V +
Sbjct: 260 ETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKA 319
Query: 405 VAFSVDNRQIVS---GSRDKTIKLWNT 476
+A+ +++ G D+TIK WNT
Sbjct: 320 LAWCPFQANLLATGGGGGDRTIKFWNT 346
Score = 31.9 bits (69), Expect = 0.58
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +3
Query: 315 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
G L LW + HT VL +A S D + S + D+T++ WN
Sbjct: 378 GFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWN 430
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 375 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQ 503
+ HT++V + +S +Q+ SG D + +W+ ++A T Q
Sbjct: 262 YRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQ 305
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +2
Query: 566 IVSCGWDRTVKVWHLTNCKLK--INHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 739
+++ D TV +W + + G + ++ +PDG A G + + LWD
Sbjct: 153 VLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSA 212
Query: 740 DGKHLHTL 763
+ L TL
Sbjct: 213 SNRQLRTL 220
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 41.9 bits (94), Expect = 5e-04
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWD--LAAGKTT----RRFEDHTKDVLS 404
+ + GH+ + + S G SG D + +WD +A+ +T R E+HT V +
Sbjct: 250 ETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKA 309
Query: 405 VAFSVDNRQIVS---GSRDKTIKLWNT 476
+A+ +++ G D+TIK WNT
Sbjct: 310 LAWCPFQANLLATGGGGGDRTIKFWNT 336
Score = 31.9 bits (69), Expect = 0.58
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +3
Query: 315 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
G L LW + HT VL +A S D + S + D+T++ WN
Sbjct: 368 GFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWN 420
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 375 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQ 503
+ HT++V + +S +Q+ SG D + +W+ ++A T Q
Sbjct: 252 YRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQ 295
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +2
Query: 566 IVSCGWDRTVKVWHLTNCKLK--INHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 739
+++ D TV +W + + G + ++ +PDG A G + + LWD
Sbjct: 143 VLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSA 202
Query: 740 DGKHLHTL 763
+ L TL
Sbjct: 203 SNRQLRTL 210
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 41.9 bits (94), Expect = 5e-04
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Frame = +2
Query: 509 GHSDWVSCVRFSP--NHAN---PIIVSCGWDRTVKVWHLTN------CKLKINHLGHSGY 655
GH+D V V ++P +HA+ PI+ SC D TV++W ++ CK + H+
Sbjct: 18 GHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEET-HTRT 76
Query: 656 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLTTM 772
+ + SP G L A+ D +W N G ++T+
Sbjct: 77 VRSCAWSPSGQLLATASFDGTTGIWK-NYGSEFECISTL 114
Score = 35.5 bits (78), Expect = 0.047
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK---TTRRFEDHTKDVLSVAFSVDN 425
GH + + V ++ G+ + S DK++ +W++ G HT+DV V +
Sbjct: 116 GHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTM 175
Query: 426 RQIVSGSRDKTIKLW 470
+ S S D TIK+W
Sbjct: 176 DVLFSCSYDNTIKVW 190
Score = 35.1 bits (77), Expect = 0.062
Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +3
Query: 258 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK--TTRRFEDHTKDVLSVAFSVDNRQ 431
H+ + S G + S+D T +W + E H +V SV+++
Sbjct: 73 HTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGSC 132
Query: 432 IVSGSRDKTIKLWNTLAECKY 494
+ + SRDK++ +W L +Y
Sbjct: 133 LATCSRDKSVWIWEVLEGNEY 153
Score = 31.9 bits (69), Expect = 0.58
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Frame = +3
Query: 312 SGSWDKTLRLWD---LAAGKTTRRF--EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 476
S S D T+R+W+ L+ T + E HT+ V S A+S + + + S D T +W
Sbjct: 44 SCSGDNTVRIWEQSSLSRSWTCKTVLEETHTRTVRSCAWSPSGQLLATASFDGTTGIWKN 103
Query: 477 LA---ECKYTIQDEDTAI 521
EC T++ + +
Sbjct: 104 YGSEFECISTLEGHENEV 121
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = +2
Query: 437 VWFSRQDYQTLEHPCGVQVYHPR*GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTN 616
VW+S D E+ C + GHS V + F N A +V+C D T+K+W
Sbjct: 189 VWWSEDDDG--EYQCVQTLGESNNGHSSTVWSISF--NAAGDKMVTCSDDLTLKIWGTDI 244
Query: 617 CKLK 628
K++
Sbjct: 245 AKMQ 248
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTN------C--KLKINHLGHSGYLNT 664
GH+ V V++ P ++ SC +D T+KVW + C L ++ GHS + +
Sbjct: 161 GHTQDVKMVQWHPTM--DVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWS 218
Query: 665 VTVSPDGSLCASGGKDMKAMLWDLNDGK 748
++ + G + D+ +W + K
Sbjct: 219 ISFNAAGDKMVTCSDDLTLKIWGTDIAK 246
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLW-------DLAAGKTTRRFED-HTKDVLSVA 410
GH+ + V + S S+D T+++W + +T + H+ V S++
Sbjct: 161 GHTQDVKMVQWHPTMDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSIS 220
Query: 411 FSVDNRQIVSGSRDKTIKLWNT 476
F+ ++V+ S D T+K+W T
Sbjct: 221 FNAAGDKMVTCSDDLTLKIWGT 242
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/80 (22%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLK-INHL-GHSGYLNTVTVSPDG 685
H+ V +SP+ ++ + +D T +W + + I+ L GH + +V+ + G
Sbjct: 73 HTRTVRSCAWSPS--GQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASG 130
Query: 686 SLCASGGKDMKAMLWDLNDG 745
S A+ +D +W++ +G
Sbjct: 131 SCLATCSRDKSVWIWEVLEG 150
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 610
H + V+ V++SP N ++ S D VK+W L
Sbjct: 316 HENDVNSVQWSPGEGNRLLASASDDGMVKIWQL 348
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 41.9 bits (94), Expect = 5e-04
Identities = 26/118 (22%), Positives = 56/118 (47%), Gaps = 1/118 (0%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHAN-PIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
H+D V CV+FSP+ A P+ + G D+ + +W L + + H + ++T
Sbjct: 283 HTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQHSTPRF-ICEHEEGVTSLTWIGTSK 341
Query: 689 LCASGGKDMKAMLWDLNDGKHLHTLTTMISSLPCASQPTDTGYVLLSDLPSRSGIWKA 862
A+G + +WD G +HT ++ S T+T +++ + + + ++++
Sbjct: 342 YLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNTDFIVSVSVDNTARVFES 399
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Frame = +3
Query: 258 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI- 434
H+ ++ + ++S+ + A+SGS D ++ + ++ GK HT V V FS + I
Sbjct: 241 HTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIP 300
Query: 435 --VSGSRDKTIKLWN 473
+G DK + +W+
Sbjct: 301 LAATGGMDKKLIIWD 315
Score = 37.9 bits (84), Expect = 0.009
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +2
Query: 641 GHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLNDGKHLHTLTTMISSLPCASQPTDTGY 817
GH G L + SP D +L A+GG D KA LW + +G L S+ C + D G
Sbjct: 68 GHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYD-GQ 126
Query: 818 VLLS 829
+L S
Sbjct: 127 LLAS 130
Score = 37.1 bits (82), Expect = 0.015
Identities = 22/79 (27%), Positives = 35/79 (44%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GH + + SP A ++ + G D +W + N GH ++ + S DG
Sbjct: 68 GHKGELYALACSPTDAT-LVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDGQ 126
Query: 689 LCASGGKDMKAMLWDLNDG 745
L ASGG D ++D + G
Sbjct: 127 LLASGGLDGVVQIFDASSG 145
Score = 35.1 bits (77), Expect = 0.062
Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +3
Query: 249 FIGHSHFISDVVLS-SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN 425
F GH + + S +D +G D LW + G H V +AFS D
Sbjct: 66 FTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDG 125
Query: 426 RQIVSGSRDKTIKLWN 473
+ + SG D +++++
Sbjct: 126 QLLASGGLDGVVQIFD 141
Score = 35.1 bits (77), Expect = 0.062
Identities = 19/84 (22%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +3
Query: 228 LRYTSKAFI-GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 404
L++++ FI H ++ + Y +G + T+ +WD G + H V +
Sbjct: 316 LQHSTPRFICEHEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQA 375
Query: 405 VAFSVDNRQIVSGSRDKTIKLWNT 476
++ S + IVS S D T +++ +
Sbjct: 376 ISVSTNTDFIVSVSVDNTARVFES 399
Score = 33.5 bits (73), Expect = 0.19
Identities = 17/73 (23%), Positives = 34/73 (46%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
GH +S + S DG SG D ++++D ++G + + V + +
Sbjct: 111 GHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIV 170
Query: 435 VSGSRDKTIKLWN 473
++GS D ++ +WN
Sbjct: 171 LAGSEDCSLWMWN 183
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 41.5 bits (93), Expect = 7e-04
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +3
Query: 300 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKL 467
N S S DK +++WD+A G E HTK+V +VA++ ++SGS D+T+ L
Sbjct: 247 NILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTVVL 303
Score = 37.1 bits (82), Expect = 0.015
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Frame = +3
Query: 255 GHSHFISDVVLS-SDGNYALSGSWDKTLRLWDLAAGKTT--RRFEDHTKDVLSVAFSVDN 425
GH + V + S N +GS D+T++LWDL+ + + + + +AFS DN
Sbjct: 367 GHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNEPSCIATHNPNAGGLFFIAFSPDN 426
Query: 426 RQIVS-GSRDKTIKLWNTLAE 485
+++ G +KLW+TL++
Sbjct: 427 PFLLAMGGVMGELKLWDTLSD 447
Score = 36.7 bits (81), Expect = 0.020
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLK--INHLGHSGYLNTVTVSPD 682
GH + + V ++ + N ++ + DRTVK+W L+N + H ++G L + SPD
Sbjct: 367 GHDEAATSVSYNISAPN-LLATGSKDRTVKLWDLSNNEPSCIATHNPNAGGLFFIAFSPD 425
Query: 683 GS-LCASGGKDMKAMLWD 733
L A GG + LWD
Sbjct: 426 NPFLLAMGGVMGELKLWD 443
Score = 34.7 bits (76), Expect = 0.082
Identities = 12/40 (30%), Positives = 26/40 (65%)
Frame = +1
Query: 103 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDE 222
T+ GH+ T ++ N P+++ + S+D+T+ +W L+ +E
Sbjct: 364 TINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNE 403
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 41.5 bits (93), Expect = 7e-04
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +2
Query: 563 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLN 739
+++S D+TV++W T C ++ H+ Y+ V +P + + ASG D KA +W L+
Sbjct: 285 LLLSASKDKTVRLWR-TGCDQCLHVFHHNNYVTCVEFNPVNKNNFASGSIDGKARIWGLS 343
Query: 740 DGKHLHTLTTMISSLPCASQPTDTGYVL 823
+ + + S + QP G+V+
Sbjct: 344 EERVVAWTDVRDSISAISYQPNGNGFVV 371
Score = 41.1 bits (92), Expect = 0.001
Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQ 431
GH+ + D+ S D N LS S DKT+RLW + F H V V F+ V+
Sbjct: 270 GHTGDVLDLAWS-DSNLLLSASKDKTVRLWRTGCDQCLHVFH-HNNYVTCVEFNPVNKNN 327
Query: 432 IVSGSRDKTIKLWNTLAE 485
SGS D ++W E
Sbjct: 328 FASGSIDGKARIWGLSEE 345
Score = 33.9 bits (74), Expect = 0.14
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +2
Query: 626 KINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 730
KIN GH G + T+ SPDG A+GG+D +W
Sbjct: 193 KIN--GHKGKIWTLKFSPDGKYLATGGEDGVVKIW 225
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDE 222
L GH G V +A + +++LS+S+DKT+ +W+ D+
Sbjct: 268 LYGHTGDVLDLAWSDS--NLLLSASKDKTVRLWRTGCDQ 304
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 41.1 bits (92), Expect = 0.001
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 7/122 (5%)
Frame = +3
Query: 210 DQRRKQLRYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 389
D +Y + HS ++ V+ + Y SGS DKT+++WDL + + H
Sbjct: 295 DSESDPFKYLTSLEGHHSGEVTCFVVGGEVLY--SGSVDKTIKVWDLNTLQCRMTLKQHI 352
Query: 390 KDVLSVAFSVDNRQIVSGSRDKTIKLW----NTLAECKYTIQDE---DTAIGCHVSDSHP 548
V S+ ++ ++S S D TIKLW N + T + E T G H +++ P
Sbjct: 353 GTVTSLL--CWDKCLISSSLDGTIKLWACSENESLKVVQTRKQELSVHTLCGMHDAEAKP 410
Query: 549 IM 554
IM
Sbjct: 411 IM 412
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3
Query: 246 AFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR 371
A GH + I + L + S S D TL +WD +G+ R
Sbjct: 182 ALEGHKNDIKGIALPQGSDKLFSVSGDGTLLIWDCNSGQCVR 223
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 41.1 bits (92), Expect = 0.001
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Frame = +3
Query: 249 FIGHSHFISDVVLSSDGNYALSGSWDKTLRLWD--LAAGKTTR----RFEDHTKDVLSVA 410
++GH+ + + S G SG D + +WD LA+ TR RFE+HT V ++A
Sbjct: 232 YVGHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALA 291
Query: 411 FSVDNRQIVS---GSRDKTIKLWNT 476
+ +++ G D I WNT
Sbjct: 292 WCPFQASLLATGGGVGDGKINFWNT 316
Score = 35.9 bits (79), Expect = 0.035
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +3
Query: 315 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 485
G L LW + HT VL +A S D + S + D+T++LWN E
Sbjct: 348 GFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGE 404
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 384 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQ 503
HT++V + +S +++ SG D + +W+ +LA T Q
Sbjct: 235 HTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQ 275
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDL--AAGKTTRR 374
GH+ + + S DG S + D+TLRLW++ KTT++
Sbjct: 370 GHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPPKTTKK 411
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 41.1 bits (92), Expect = 0.001
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWD---LAAGKTTR----RFEDHTKDVL 401
+ ++GH+ + + S G SG D + +WD +A+ TR RFE+HT V
Sbjct: 212 ETYLGHTEEVCGLKWSESGKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEHTAAVR 271
Query: 402 SVAFSVDNRQIVS---GSRDKTIKLWNT 476
++A+ +++ G D IK WNT
Sbjct: 272 ALAWCPFQASLLATGGGVGDGKIKFWNT 299
Score = 35.9 bits (79), Expect = 0.035
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +3
Query: 315 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 485
G L LW + HT VL +A S D + S + D+T++LWN E
Sbjct: 331 GFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGE 387
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDL--AAGKTTRR 374
GH+ + + S DG S + D+TLRLW++ KTT++
Sbjct: 353 GHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPPKTTKK 394
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 41.1 bits (92), Expect = 0.001
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Frame = +3
Query: 219 RKQLRYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 398
R Q + SK GH I + SSD SG D L +W+ + + RF +H V
Sbjct: 279 RTQEDHVSK-LKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAV 337
Query: 399 LSVAFSVDNRQIVS---GSRDKTIKLWNTLAECKYTIQDEDTAI 521
++A+S + +++ G+ D+ I+ WNT D ++ +
Sbjct: 338 KAIAWSPHHFGLLASGGGTADRCIRFWNTTTNTHLNCVDTNSQV 381
Score = 36.3 bits (80), Expect = 0.027
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +3
Query: 312 SGSWDKTLRLWDLAAGKT-TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
SGS DK++ D+ + + + H ++ + +S DNR++ SG D + +WN
Sbjct: 266 SGSRDKSILQRDIRTQEDHVSKLKGHKSEICGLKWSSDNRELASGGNDNKLFVWN 320
Score = 34.7 bits (76), Expect = 0.082
Identities = 22/77 (28%), Positives = 38/77 (49%)
Frame = +3
Query: 231 RYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 410
+ T +G + V + G + G+ T+++WD+ K R E H V ++A
Sbjct: 199 KVTKLCDLGVDETVCSVGWALRGTHLAIGTSSGTVQIWDVLRCKNIRTMEGHRLRVGALA 258
Query: 411 FSVDNRQIVSGSRDKTI 461
+S + + SGSRDK+I
Sbjct: 259 WS--SSVLSSGSRDKSI 273
Score = 34.3 bits (75), Expect = 0.11
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +3
Query: 270 ISDVVLSSDGNYALS--GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSG 443
+ ++V S + N +S G + +W H+ VL +A S D + IV+G
Sbjct: 381 VCNLVWSKNVNELVSTHGYSQNQIIVWKYPTMSKLATLTGHSYRVLYLAVSPDGQTIVTG 440
Query: 444 SRDKTIKLWNTLAECKYTIQDEDTAIG 524
+ D+T++ WN K Q ++ IG
Sbjct: 441 AGDETLRFWNVFPSPK--SQSRESEIG 465
Score = 32.3 bits (70), Expect = 0.44
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 350
GHS+ + + +S DG ++G+ D+TLR W++
Sbjct: 420 GHSYRVLYLAVSPDGQTIVTGAGDETLRFWNV 451
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +2
Query: 551 HANPIIVSCGWDRT-VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 727
+ N ++ + G+ + + VW GHS + + VSPDG +G D
Sbjct: 389 NVNELVSTHGYSQNQIIVWKYPTMSKLATLTGHSYRVLYLAVSPDGQTIVTGAGDETLRF 448
Query: 728 WDL 736
W++
Sbjct: 449 WNV 451
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 41.1 bits (92), Expect = 0.001
Identities = 22/75 (29%), Positives = 38/75 (50%)
Frame = +3
Query: 249 FIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 428
F GH + L ++ A S S D + +LWD G FE H V + AFS D +
Sbjct: 57 FEGHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSQDTK 115
Query: 429 QIVSGSRDKTIKLWN 473
+++G +K +++++
Sbjct: 116 YLITGGFEKILRVFD 130
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/60 (35%), Positives = 29/60 (48%)
Frame = +3
Query: 297 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 476
GN ++G D +RL+D GK + H V V F+ SGS D TI++W T
Sbjct: 240 GNKFVAGGEDMWVRLFDFHTGKEIGCNKGHHGPVHCVRFAPTGESYASGSEDGTIRIWQT 299
Score = 31.9 bits (69), Expect = 0.58
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Frame = +3
Query: 255 GHSHFISDVVLSS---DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN 425
GHS + D+ S DG + +S S D L + G FE H V S +
Sbjct: 14 GHSRPVVDLFYSPITPDGFFLISASKDSQPMLRNGETGDWIGTFEGHKGAVWSSCLDNNA 73
Query: 426 RQIVSGSRDKTIKLWNTL 479
+ S S D + KLW+ L
Sbjct: 74 LRAASASADFSAKLWDAL 91
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 333 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
+RLWD+ +GK + E + V S S D R I + T+K W+
Sbjct: 170 VRLWDVRSGKIVQTLETKS-PVTSAEVSQDGRYITTAD-GSTVKFWD 214
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/61 (29%), Positives = 25/61 (40%)
Frame = +2
Query: 641 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLTTMISSLPCASQPTDTGYV 820
GH G + + + + AS D A LWD G LH+ CA DT Y+
Sbjct: 59 GHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFS-QDTKYL 117
Query: 821 L 823
+
Sbjct: 118 I 118
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/69 (24%), Positives = 28/69 (40%)
Frame = +2
Query: 524 VSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 703
+ P N + G D V+++ K + GH G ++ V +P G ASG
Sbjct: 230 IESASLEPKSGNKFVAG-GEDMWVRLFDFHTGKEIGCNKGHHGPVHCVRFAPTGESYASG 288
Query: 704 GKDMKAMLW 730
+D +W
Sbjct: 289 SEDGTIRIW 297
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 41.1 bits (92), Expect = 0.001
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGH-SGYLNTVTVSPDG 685
GH VSCV+ +++ D TVK+W + + + +G S + ++
Sbjct: 937 GHDSQVSCVKMLSGER---VLTAAHDGTVKMWDVRT-DMCVATVGRCSSAILSLEYDDST 992
Query: 686 SLCASGGKDMKAMLWDLNDGKHLHTL 763
+ A+ G+D A +WD+ GK +H L
Sbjct: 993 GILAAAGRDTVANIWDIRSGKQMHKL 1018
Score = 38.7 bits (86), Expect = 0.005
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +3
Query: 291 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 470
S G A +G D +WD+ +GK + + HTK + S+ D +++GS D T ++W
Sbjct: 991 STGILAAAGR-DTVANIWDIRSGKQMHKLKGHTKWIRSIRMVEDT--LITGSDDWTARVW 1047
Query: 471 N-TLAECKYTIQDEDTAIGCHVSDSHPIMPTP 563
+ + C D + CH + +P
Sbjct: 1048 SVSRGSC-------DAVLACHAGPVQSVEYSP 1072
Score = 37.9 bits (84), Expect = 0.009
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Frame = +3
Query: 216 RRKQLRYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD 395
R +LR T K GH+ + +SSD +SGS D ++ +WD + + H
Sbjct: 887 RGSELRATLK---GHTGTVR--AISSDRGKIVSGSDDLSVIVWDKQTTQLLEELKGHDSQ 941
Query: 396 VLSVAFSVDNRQIVSGSRDKTIKLWNTLAE-CKYTIQDEDTAI 521
V V + ++++ + D T+K+W+ + C T+ +AI
Sbjct: 942 VSCVKM-LSGERVLTAAHDGTVKMWDVRTDMCVATVGRCSSAI 983
Score = 37.5 bits (83), Expect = 0.012
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Frame = +3
Query: 294 DGNYALSGSWDKTLRLWD--LAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 467
D + +SGS D +++WD L + + HT V ++ S D +IVSGS D ++ +
Sbjct: 866 DAGFFISGSTDCLVKIWDPSLRGSELRATLKGHTGTVRAI--SSDRGKIVSGSDDLSVIV 923
Query: 468 WN-TLAECKYTIQDEDTAIGC 527
W+ + ++ D+ + C
Sbjct: 924 WDKQTTQLLEELKGHDSQVSC 944
Score = 31.1 bits (67), Expect = 1.0
Identities = 22/98 (22%), Positives = 41/98 (41%), Gaps = 2/98 (2%)
Frame = +2
Query: 497 HPR*GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVS 676
H GH+ W+ +R +++ D T +VW ++ H+G + +V S
Sbjct: 1016 HKLKGHTKWIRSIRM----VEDTLITGSDDWTARVWSVSRGSCDAVLACHAGPVQSVEYS 1071
Query: 677 PDGSLCASGGKDMKAMLWDLNDG--KHLHTLTTMISSL 784
P +G D W+ ++G K + +T SS+
Sbjct: 1072 PFDKGIITGSADGLLRFWENDEGGIKCVKNITLHSSSI 1109
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +1
Query: 91 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 204
+LR TL+GH G V I+++ I+S S D ++IVW
Sbjct: 890 ELRATLKGHTGTVRAISSD---RGKIVSGSDDLSVIVW 924
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/61 (21%), Positives = 29/61 (47%)
Frame = +2
Query: 563 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 742
I+ + G D +W + + K GH+ ++ ++ + D + +G D A +W ++
Sbjct: 994 ILAAAGRDTVANIWDIRSGKQMHKLKGHTKWIRSIRMVEDTLI--TGSDDWTARVWSVSR 1051
Query: 743 G 745
G
Sbjct: 1052 G 1052
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/77 (25%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE-DHTKDVLSVAF--SVDN 425
GH ++ + +S+G+ +SGS D + +W+ ++ K + HT ++ F +
Sbjct: 48 GHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVPETSD 107
Query: 426 RQIVSGSRDKTIKLWNT 476
+VSG+ D ++L+NT
Sbjct: 108 ELVVSGAGDAEVRLFNT 124
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +2
Query: 641 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLTT 769
GH G +N + + +GSL SG D++ +W+ + K LH++ T
Sbjct: 48 GHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDT 90
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/84 (21%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Frame = +3
Query: 243 KAFIGHSHFISDV----VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 410
+ ++GH + +D+ L G Y SGS D +W+ G+ + + +
Sbjct: 611 RRYVGHCNVGTDIKQASFLGQRGEYIASGSDDGRWFIWEKQTGRLMKVLVGDESVLNCIQ 670
Query: 411 FSVDNRQIVSGSRDKTIKLWNTLA 482
+ + + D TIK+W+ A
Sbjct: 671 CHPFDSVVATSGIDNTIKIWSPTA 694
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/82 (24%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +3
Query: 237 TSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG---KTTRRFEDHTKDVLSV 407
T++ H+ + + S +G Y S S D+T +W+++A H K V+++
Sbjct: 266 TAQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAI 325
Query: 408 AFSVDNRQIVSGSRDKTIKLWN 473
+S D+RQ+++ ++ I+ W+
Sbjct: 326 LWSPDDRQVLTCGAEEVIRRWD 347
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/92 (25%), Positives = 45/92 (48%)
Frame = +3
Query: 294 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
DG ++G D+++ +WDL + T+ V +A + D + +VS +D I L++
Sbjct: 372 DGQGIIAGMTDRSICMWDLDGREKECWKGQRTQKVSDIAMTDDGKWLVSVCKDSVISLFD 431
Query: 474 TLAECKYTIQDEDTAIGCHVSDSHPIMPTPLL 569
A + I++ED +S+ + + LL
Sbjct: 432 REATVERLIEEEDMITSFSLSNDNKYILVNLL 463
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/74 (22%), Positives = 37/74 (50%)
Frame = +3
Query: 252 IGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 431
+GH + ++ S D L+ ++ +R WD+ +G +E +S + D +
Sbjct: 316 VGHHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISPISCGWYPDGQG 375
Query: 432 IVSGSRDKTIKLWN 473
I++G D++I +W+
Sbjct: 376 IIAGMTDRSICMWD 389
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/68 (29%), Positives = 36/68 (52%)
Frame = +3
Query: 270 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 449
+SD+ ++ DG + +S D + L+D A T R + + S + S DN+ I+
Sbjct: 406 VSDIAMTDDGKWLVSVCKDSVISLFDREA--TVERLIEEEDMITSFSLSNDNKYILVNLL 463
Query: 450 DKTIKLWN 473
++ I+LWN
Sbjct: 464 NQEIRLWN 471
Score = 38.7 bits (86), Expect = 0.005
Identities = 31/126 (24%), Positives = 52/126 (41%), Gaps = 4/126 (3%)
Frame = +2
Query: 455 DYQTLEHPCGVQVYHPR*GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLT---NCKL 625
D+Q +H Q H+D V ++FS H + S D+T +W ++ + L
Sbjct: 254 DHQCGKHQIPSQTAQILESHTDEVWFLQFS--HNGKYLASSSKDQTAIIWEISADGHISL 311
Query: 626 KINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLTT-MISSLPCASQP 802
K +GH + + SPD + G + WD++ G +H IS + C P
Sbjct: 312 KHTLVGHHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISPISCGWYP 371
Query: 803 TDTGYV 820
G +
Sbjct: 372 DGQGII 377
Score = 35.9 bits (79), Expect = 0.035
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 566 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDG-SLCASGGKDMKAMLWDLN 739
I S D V +WH + KL + GH+G +N V+ SP + AS D +W L+
Sbjct: 504 IASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGLD 562
Score = 33.5 bits (73), Expect = 0.19
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 303 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN-RQIVSGSRDKTIKLW 470
+ SGS D + +W + GK H V V++S N + S S D TI++W
Sbjct: 503 FIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIW 559
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +3
Query: 360 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDEDTAIGCH 530
+T + E HT +V + FS + + + S S+D+T +W A+ ++ + T +G H
Sbjct: 265 QTAQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISL--KHTLVGHH 319
Score = 32.7 bits (71), Expect = 0.33
Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = +2
Query: 485 VQVYHPR*GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNT 664
+ + H GH V + +SP+ +++CG + ++ W + + H+ G ++
Sbjct: 309 ISLKHTLVGHHKPVIAILWSPDDRQ--VLTCGAEEVIRRWDVDSGDCV--HMYEKGGISP 364
Query: 665 VTVS--PDGSLCASGGKDMKAMLWDLNDGK 748
++ PDG +G D +WDL DG+
Sbjct: 365 ISCGWYPDGQGIIAGMTDRSICMWDL-DGR 393
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 124 WVTQIATNPKYPDMILSSSRDKTLIVWKLTRD 219
W Q + N KY + SSS+D+T I+W+++ D
Sbjct: 278 WFLQFSHNGKY---LASSSKDQTAIIWEISAD 306
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 85 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 216
T KL L GH G V ++ +P M+ S+S D T+ +W L R
Sbjct: 520 TGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGLDR 563
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 610
GH+ V+CV +SP + + ++ S D T+++W L
Sbjct: 529 GHAGAVNCVSWSPTNLH-MLASASDDGTIRIWGL 561
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +3
Query: 300 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTI 461
N S S DK +++WD+A G E HTK+V +VA++ ++SGS D+T+
Sbjct: 279 NILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTV 333
Score = 37.9 bits (84), Expect = 0.009
Identities = 20/68 (29%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = +3
Query: 291 SDGNYALSGSWDKTLRLWDLAAGKTT--RRFEDHTKDVLSVAFSVDNRQIVS-GSRDKTI 461
S N +GS DK+++LWDL+ + + + + V S++F+VDN +++ G +
Sbjct: 415 STPNLLATGSMDKSVKLWDLSNNEPSCIATHQPNAGAVFSISFAVDNPFLLAIGGSKGEL 474
Query: 462 KLWNTLAE 485
+W+TL +
Sbjct: 475 HVWDTLLD 482
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Frame = +3
Query: 294 DGNYALSGSWDKTLRLWDLAAGKTTRRF----EDHTKDVLSVAFSVDNRQIVSGSRDKTI 461
DG G D ++++W L G +R + HT D+ SV FS D R ++S S D ++
Sbjct: 338 DGKRIAGGVGDGSIQIWSLKPGWGSRPDIYVGKAHTDDITSVKFSSDGRILLSRSFDGSL 397
Query: 462 KLWN 473
K+W+
Sbjct: 398 KVWD 401
Score = 39.1 bits (87), Expect = 0.004
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +3
Query: 234 YTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR-FE--DHTKDVLS 404
Y KA H+ I+ V SSDG LS S+D +L++WDL K + FE + +
Sbjct: 367 YVGKA---HTDDITSVKFSSDGRILLSRSFDGSLKVWDLRQMKEALKVFEGLPNYYPQTN 423
Query: 405 VAFSVDNRQIVSGS 446
VAFS D + I++G+
Sbjct: 424 VAFSPDEQIILTGT 437
Score = 33.5 bits (73), Expect = 0.19
Identities = 15/47 (31%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +3
Query: 210 DQRRKQLRYTSKAFI-GHSHFISDVVLSSDGNYALSGSWDKTLRLWD 347
++ R Q+ +++ + GH+ +S + + S G LSGS+D T+R++D
Sbjct: 159 EENRYQIPLSNEIQLKGHTKIVSSLAVDSAGARVLSGSYDYTVRMYD 205
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = +2
Query: 566 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLND 742
+ S ++ V+VW + +L H + ++ S D +L ASG D LW +N
Sbjct: 549 VASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQ 608
Query: 743 GKHLHTLTTMISSLPCASQPTDTG 814
G + T+ T +++ C P++TG
Sbjct: 609 GVSIGTIKTK-ANICCVQFPSETG 631
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +3
Query: 312 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF-SVDNRQIVSGSRDKTIKLWN 473
S +++ +++WD+A + ++H K V S+ + S D + SGS D ++KLW+
Sbjct: 551 SSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWS 605
Score = 31.5 bits (68), Expect = 0.76
Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +3
Query: 288 SSDGNYALSGSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 464
S G GS D + +DL K H K V V F VD+ +VS S D T+K
Sbjct: 628 SETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRF-VDSSTLVSSSTDNTLK 686
Query: 465 LWN 473
LW+
Sbjct: 687 LWD 689
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = +2
Query: 566 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLND 742
+ S ++ V+VW + +L H + ++ S D +L ASG D LW +N
Sbjct: 549 VASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQ 608
Query: 743 GKHLHTLTTMISSLPCASQPTDTG 814
G + T+ T +++ C P++TG
Sbjct: 609 GVSIGTIKTK-ANICCVQFPSETG 631
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +3
Query: 312 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF-SVDNRQIVSGSRDKTIKLWN 473
S +++ +++WD+A + ++H K V S+ + S D + SGS D ++KLW+
Sbjct: 551 SSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWS 605
Score = 31.5 bits (68), Expect = 0.76
Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +3
Query: 288 SSDGNYALSGSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 464
S G GS D + +DL K H K V V F VD+ +VS S D T+K
Sbjct: 628 SETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRF-VDSSTLVSSSTDNTLK 686
Query: 465 LWN 473
LW+
Sbjct: 687 LWD 689
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/75 (29%), Positives = 38/75 (50%)
Frame = +3
Query: 249 FIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 428
F GH + L ++ A S S D + +LWD G FE H V + AFS D +
Sbjct: 57 FEGHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSEDTK 115
Query: 429 QIVSGSRDKTIKLWN 473
+++G +K +++++
Sbjct: 116 SLLTGGFEKILRVFD 130
Score = 33.5 bits (73), Expect = 0.19
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +3
Query: 297 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 476
G ++G D +R++D G+ + H V V F+ SGS D TI++W T
Sbjct: 240 GEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIWQT 299
Score = 31.5 bits (68), Expect = 0.76
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Frame = +3
Query: 255 GHSHFISDVVLSS---DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN 425
GHS + D+ S DG + +S S D L + G FE H V S +
Sbjct: 14 GHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSCLDNNA 73
Query: 426 RQIVSGSRDKTIKLWNTL 479
+ S S D + KLW+ L
Sbjct: 74 LRAASASADFSAKLWDAL 91
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 333 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
+RLWD+ +GK + E + V S S D R I + T+K W+
Sbjct: 170 VRLWDVRSGKIVQTLETKS-PVTSAEVSQDGRYITTAD-GSTVKFWD 214
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/75 (29%), Positives = 38/75 (50%)
Frame = +3
Query: 249 FIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 428
F GH + L ++ A S S D + +LWD G FE H V + AFS D +
Sbjct: 57 FEGHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSEDTK 115
Query: 429 QIVSGSRDKTIKLWN 473
+++G +K +++++
Sbjct: 116 SLLTGGFEKILRVFD 130
Score = 33.5 bits (73), Expect = 0.19
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +3
Query: 297 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 476
G ++G D +R++D G+ + H V V F+ SGS D TI++W T
Sbjct: 240 GEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIWQT 299
Score = 31.5 bits (68), Expect = 0.76
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Frame = +3
Query: 255 GHSHFISDVVLSS---DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN 425
GHS + D+ S DG + +S S D L + G FE H V S +
Sbjct: 14 GHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSCLDNNA 73
Query: 426 RQIVSGSRDKTIKLWNTL 479
+ S S D + KLW+ L
Sbjct: 74 LRAASASADFSAKLWDAL 91
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 333 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
+RLWD+ +GK + E + V S S D R I + T+K W+
Sbjct: 170 VRLWDVRSGKIVQTLETKS-PVTSAEVSQDGRYITTAD-GSTVKFWD 214
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Frame = +3
Query: 240 SKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR----RFEDHTKDVLSV 407
S+ + GH + V +S+G SGS D+T R+W++ ++ + HT V +
Sbjct: 13 SREYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQL 72
Query: 408 AFSVDNRQIV-SGSRDKTIKLWN 473
+ + +V + S DK+++LW+
Sbjct: 73 CWDPKHSDLVATASGDKSVRLWD 95
Score = 35.9 bits (79), Expect = 0.035
Identities = 15/52 (28%), Positives = 31/52 (59%)
Frame = +3
Query: 312 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 467
+ S DK++RLWD +GK T++ E +++ ++ + D + G+RD + +
Sbjct: 84 TASGDKSVRLWDARSGKCTQQVELSGENI-NITYKPDGTHVAVGNRDDELTI 134
Score = 33.9 bits (74), Expect = 0.14
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 204
L+GH V Q+ +PK+ D++ ++S DK++ +W
Sbjct: 62 LKGHTDSVDQLCWDPKHSDLVATASGDKSVRLW 94
Score = 33.1 bits (72), Expect = 0.25
Identities = 18/65 (27%), Positives = 28/65 (43%)
Frame = +3
Query: 279 VVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 458
+ + G Y GS D + LWD++ R F V +++F+ I S S D
Sbjct: 197 IAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVRTISFNYSGEYIASASEDLF 256
Query: 459 IKLWN 473
I + N
Sbjct: 257 IDIAN 261
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/61 (27%), Positives = 25/61 (40%)
Frame = +2
Query: 590 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLTT 769
TV+V + K H+ + + P G A G D LWD++D L T T
Sbjct: 172 TVEVLSYPSLKPLDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTK 231
Query: 770 M 772
+
Sbjct: 232 L 232
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 40.3 bits (90), Expect = 0.002
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 19/116 (16%)
Frame = +3
Query: 183 RQNSHRVEADQRRKQLRYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 362
R N+ RV+ Q + R K H H ++ V LS D + S S D T+ WD+++GK
Sbjct: 123 RANALRVQDLQSSDKFRVIVK----HQHSVTGVALSDDDSRGFSVSKDGTILHWDVSSGK 178
Query: 363 TTR--------------RFED-----HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
+ +F++ H K L++A S D R + +G D + LW+
Sbjct: 179 SDEYKWPSDEVLKSHGLKFQESWYTRHNKQSLALAVSSDGRYLATGGVDCHVHLWD 234
Score = 34.7 bits (76), Expect = 0.082
Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 15/97 (15%)
Frame = +3
Query: 228 LRYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR------------ 371
L++ + H+ + +SSDG Y +G D + LWD+ + +
Sbjct: 195 LKFQESWYTRHNKQSLALAVSSDGRYLATGGVDCHVHLWDIRTREHVQVNKLKNNQVKDS 254
Query: 372 ---RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
F H V S+ F ++ SGS D T+ +WN
Sbjct: 255 VHCAFTGHCGIVSSLCFREGTAELFSGSYDGTLSIWN 291
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 644 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHL 754
H+ + VS DG A+GG D LWD+ +H+
Sbjct: 205 HNKQSLALAVSSDGRYLATGGVDCHVHLWDIRTREHV 241
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 40.3 bits (90), Expect = 0.002
Identities = 24/75 (32%), Positives = 36/75 (48%)
Frame = +3
Query: 291 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 470
S+ + +GS D T++ W L G H K V+S V N + SGS D T++LW
Sbjct: 595 SEYGHVYTGSGDNTIKAWSLQDGSLLCTMSGH-KSVVSTLVVV-NGVLYSGSWDGTVRLW 652
Query: 471 NTLAECKYTIQDEDT 515
+ T+ E+T
Sbjct: 653 SLSDNSLLTVLGEET 667
Score = 36.7 bits (81), Expect = 0.020
Identities = 30/100 (30%), Positives = 42/100 (42%), Gaps = 16/100 (16%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT------KDVLSVAFS 416
GH +S +V+ + Y SGSWD T+RLW L+ + T D L +
Sbjct: 625 GHKSVVSTLVVVNGVLY--SGSWDGTVRLWSLSDNSLLTVLGEETPGIIWRDDTLMKSMK 682
Query: 417 VDNRQIVS----------GSRDKTIKLWNTLAECKYTIQD 506
+ N I+S G DKTI + L K +QD
Sbjct: 683 IQNGAILSIAVNGKWLFTGGWDKTINVQGNLGRLKRNVQD 722
Score = 33.1 bits (72), Expect = 0.25
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = +2
Query: 584 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 763
D T+K W L + L GH ++T+ V + SG D LW L+D L L
Sbjct: 606 DNTIKAWSLQDGSLLCTMSGHKSVVSTLVVV--NGVLYSGSWDGTVRLWSLSDNSLLTVL 663
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 39.9 bits (89), Expect = 0.002
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Frame = +3
Query: 192 SHRVEADQRR-KQLRYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTT 368
S R+ A + R K+L K GH ++ V +S G+ +SGS D+ + LW+ +G
Sbjct: 32 SRRISASEGRVKKLDLYGK-LNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRK 90
Query: 369 RRF-EDHTKDVLSVAF--SVDNRQIVSGSRDKTIKLWNTLAECK 491
+ H ++V F D+R I++ D ++L L K
Sbjct: 91 LSYPSGHCENVFQTKFIPFTDDRTIITSGADGQVRLGQILENGK 134
Score = 31.5 bits (68), Expect = 0.76
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 641 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 745
GH G +N V + G + SG D + MLW+ G
Sbjct: 53 GHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSG 87
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLS-SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS- 416
+ F H++ + V + G+ S S D TLR+WD+ +T H ++LS ++
Sbjct: 143 RTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIPAHDFEILSCDWNK 202
Query: 417 VDNRQIVSGSRDKTIKLWN 473
D+ + + S DKT+K+W+
Sbjct: 203 YDDCILATSSVDKTVKVWD 221
Score = 37.9 bits (84), Expect = 0.009
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 309 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI-VSGSRDKTIKLWN 473
L+ SWD T++LW + + R F++H V ++ + + S S D T+++W+
Sbjct: 123 LTSSWDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWD 178
Score = 36.3 bits (80), Expect = 0.027
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +2
Query: 563 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGY-LNTVTVSPD-GSLCASGGKDMKAMLWD 733
I+ + D+TVKVW + + ++ + L GY + V SP SL AS DM LWD
Sbjct: 207 ILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLWD 265
Score = 32.7 bits (71), Expect = 0.33
Identities = 26/122 (21%), Positives = 45/122 (36%), Gaps = 2/122 (1%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGS 688
H+ V V ++P + + S WD TVK+W + H+ + +P G
Sbjct: 105 HAREVQSVDYNPTRRDSFLTS-SWDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNPKHGD 163
Query: 689 LCASGGKDMKAMLWDLND-GKHLHTLTTMISSLPCASQPTDTGYVLLSDLPSRSGIWKAR 865
+ AS D +WD+ + G + L C D + S + +W R
Sbjct: 164 VFASASGDCTLRIWDVREPGSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVKVWDVR 223
Query: 866 RW 871
+
Sbjct: 224 SY 225
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1
Query: 103 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIP 240
T + H V Q NPK+ D+ S+S D TL +W + + IP
Sbjct: 144 TFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIP 189
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 39.5 bits (88), Expect = 0.003
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
Frame = +3
Query: 135 NCN*SEIPGHDLIFLSRQNSHRVEADQRRKQLRYTSKAFIGHSHFISDVVLSSDGNYALS 314
N N S G + R+ +++ E Q + TS +GH+ +S VV + + S
Sbjct: 233 NTNESTSEGESVSVKKRKGNNQAEESQSEGEA-VTS--LVGHTQCVSSVVWP-EHDVIYS 288
Query: 315 GSWDKTLRLWDLAAGK-TTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
SWD ++R WD+ GK + F + + V + I +G D +++W+
Sbjct: 289 SSWDHSVRRWDVETGKDSLNLFCGKALNTVDVG-GESSALIAAGGSDPILRVWD 341
Score = 32.3 bits (70), Expect = 0.44
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 347
K GH + V GN S SWD T+ LW+
Sbjct: 199 KILRGHKASVQSVSAQKSGNMVCSSSWDCTINLWN 233
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 39.5 bits (88), Expect = 0.003
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
Frame = +3
Query: 135 NCN*SEIPGHDLIFLSRQNSHRVEADQRRKQLRYTSKAFIGHSHFISDVVLSSDGNYALS 314
N N S G + R+ +++ E Q + TS +GH+ +S VV + + S
Sbjct: 233 NTNESTSEGESVSVKKRKGNNQAEESQSEGEA-VTS--LVGHTQCVSSVVWP-EHDVIYS 288
Query: 315 GSWDKTLRLWDLAAGK-TTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
SWD ++R WD+ GK + F + + V + I +G D +++W+
Sbjct: 289 SSWDHSVRRWDVETGKDSLNLFCGKALNTVDVG-GESSALIAAGGSDPILRVWD 341
Score = 33.1 bits (72), Expect = 0.25
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +3
Query: 249 FIGHSHFISDVVL-SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN 425
F HS +IS S + LS S+D + LWDL + H VLS +
Sbjct: 354 FSSHSSWISACKWHKSSWFHLLSASYDGKIMLWDLRTAWPLSVIDTHNDKVLSADW-WKG 412
Query: 426 RQIVSGSRDKTIKLWNTLA 482
+VSG D +++ + +A
Sbjct: 413 ESVVSGGADSNLRISSGIA 431
Score = 32.3 bits (70), Expect = 0.44
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 347
K GH + V GN S SWD T+ LW+
Sbjct: 199 KILRGHKASVQSVSAQKSGNMVCSSSWDCTINLWN 233
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +2
Query: 590 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 763
TV +W T+ + H G +++V P+G L A+ GK+ K +WDL + + T+
Sbjct: 262 TVTMWKPTSQAPLVQMQCHPGPVSSVAFHPNGHLMATSGKERKIKIWDLRKFEEVQTI 319
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/75 (28%), Positives = 37/75 (49%)
Frame = +3
Query: 249 FIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 428
F GH + L + A S S D T ++W+ G FE H V + AFS D
Sbjct: 52 FEGHKGAVWSCSLDKNAIRAASASADFTAKIWNALTGDELHSFE-HKHIVRACAFSEDTH 110
Query: 429 QIVSGSRDKTIKLWN 473
++++G +K +++++
Sbjct: 111 RLLTGGMEKILRIFD 125
Score = 37.9 bits (84), Expect = 0.009
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 5/105 (4%)
Frame = +3
Query: 255 GHSHFISDVVLSS---DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN 425
GHS + DV S DG + +S S D L + G FE H V S + +
Sbjct: 9 GHSRPVVDVAYSPVTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCSLDKNA 68
Query: 426 RQIVSGSRDKTIKLWNTL-AECKYTIQDEDTAIGCHVS-DSHPIM 554
+ S S D T K+WN L + ++ + + C S D+H ++
Sbjct: 69 IRAASASADFTAKIWNALTGDELHSFEHKHIVRACAFSEDTHRLL 113
Score = 31.9 bits (69), Expect = 0.58
Identities = 25/104 (24%), Positives = 48/104 (46%), Gaps = 2/104 (1%)
Frame = +2
Query: 566 IVSCGWDRTVKVWHLTNCKLKINHLGHS-GYLNTVT-VSPDGSLCASGGKDMKAMLWDLN 739
+++ G ++ ++++ L +G+S G + TV + D ++ +S LWD+
Sbjct: 112 LLTGGMEKILRIFDLNRPDAPPKEVGNSPGSIRTVEWLHSDNTILSSCTDTGDIRLWDIR 171
Query: 740 DGKHLHTLTTMISSLPCASQPTDTGYVLLSDLPSRSGIWKARRW 871
K +HTL T S + A D Y+ +D S W A+ +
Sbjct: 172 SDKIVHTLETK-SPVTSAEVSQDGRYITTAD-GSSVKFWDAKNF 213
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/58 (25%), Positives = 26/58 (44%)
Frame = +3
Query: 297 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 470
GN ++G D + +D G+ + H V V ++ SGS D T+++W
Sbjct: 235 GNTFIAGGEDMWVHRFDFQTGEEIGCNKGHHGPVHCVRYAPGGESYTSGSEDGTVRIW 292
Score = 28.7 bits (61), Expect = 5.4
Identities = 21/77 (27%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
Frame = +2
Query: 524 VSCVRFSPNHANPIIVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGSLCAS 700
V P H N I G D V + T ++ N GH G ++ V +P G S
Sbjct: 225 VESASLEPKHGNTFIAG-GEDMWVHRFDFQTGEEIGCNK-GHHGPVHCVRYAPGGESYTS 282
Query: 701 GGKDMKAMLWDLNDGKH 751
G +D +W + H
Sbjct: 283 GSEDGTVRIWVVGSVNH 299
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/83 (26%), Positives = 39/83 (46%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 422
K+ H + D+ S D Y +SGS D + +WD+ G + + H V VA+
Sbjct: 47 KSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPL 106
Query: 423 NRQIVSGSRDKTIKLWNTLAECK 491
+ + S S D+T +++ + K
Sbjct: 107 AKYVASLSSDRTCRIYANKPQTK 129
Score = 31.5 bits (68), Expect = 0.76
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 360 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
K + H KDVL + +S D+ ++SGS D + +W+
Sbjct: 44 KVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWD 81
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/83 (26%), Positives = 39/83 (46%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 422
K+ H + D+ S D Y +SGS D + +WD+ G + + H V VA+
Sbjct: 106 KSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPL 165
Query: 423 NRQIVSGSRDKTIKLWNTLAECK 491
+ + S S D+T +++ + K
Sbjct: 166 AKYVASLSSDRTCRIYANKPQTK 188
Score = 37.5 bits (83), Expect = 0.012
Identities = 24/96 (25%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Frame = +3
Query: 204 EADQRRKQLRYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED 383
+A+++ + Y S + H ++ + S G SG+ L +W L +T + ++
Sbjct: 46 QAEKKVPSVSYQS-SLTYHGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKV 104
Query: 384 HT------KDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
H KDVL + +S D+ ++SGS D + +W+
Sbjct: 105 HKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWD 140
Score = 29.5 bits (63), Expect = 3.1
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL----TNCKLKINHL--GHSGYLNTVTV 673
H V+ +RFSP+ ++ S + +W L TN K++ H + +
Sbjct: 63 HGCAVNTIRFSPS--GELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQW 120
Query: 674 SPDGSLCASGGKDMKAMLWDLNDG 745
SPD + SG D ++WD+N G
Sbjct: 121 SPDDAYLISGSVDNSCIIWDVNKG 144
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/83 (26%), Positives = 39/83 (46%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 422
K+ H + D+ S D Y +SGS D + +WD+ G + + H V VA+
Sbjct: 106 KSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPL 165
Query: 423 NRQIVSGSRDKTIKLWNTLAECK 491
+ + S S D+T +++ + K
Sbjct: 166 AKYVASLSSDRTCRIYANKPQTK 188
Score = 37.5 bits (83), Expect = 0.012
Identities = 24/96 (25%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Frame = +3
Query: 204 EADQRRKQLRYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED 383
+A+++ + Y S + H ++ + S G SG+ L +W L +T + ++
Sbjct: 46 QAEKKVPSVSYQS-SLTYHGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKV 104
Query: 384 HT------KDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
H KDVL + +S D+ ++SGS D + +W+
Sbjct: 105 HKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWD 140
Score = 29.5 bits (63), Expect = 3.1
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL----TNCKLKINHL--GHSGYLNTVTV 673
H V+ +RFSP+ ++ S + +W L TN K++ H + +
Sbjct: 63 HGCAVNTIRFSPS--GELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQW 120
Query: 674 SPDGSLCASGGKDMKAMLWDLNDG 745
SPD + SG D ++WD+N G
Sbjct: 121 SPDDAYLISGSVDNSCIIWDVNKG 144
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +3
Query: 219 RKQLRYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 398
R Q + SK +GH + + S D SG D L +W+ + + + +HT V
Sbjct: 285 RVQSDFVSK-LVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAV 343
Query: 399 LSVAFSVDNRQIVS---GSRDKTIKLWNT 476
++ +S +++ G+ D+ I+ WNT
Sbjct: 344 KAITWSPHQSSLLASGGGTADRCIRFWNT 372
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +3
Query: 333 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDED 512
+ LW + H+ VL +A S D + IV+G+ D+T++ WN K +D
Sbjct: 410 IMLWKYPSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNVFPSVKMQTPVKD 469
Query: 513 TAI 521
T +
Sbjct: 470 TGL 472
Score = 33.5 bits (73), Expect = 0.19
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +3
Query: 282 VLSSDGNYALSGSWDKTLRLWDLAAGKT-TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 458
VL+ + SGS D+ + D+ + H +V + +S D+R++ SG D
Sbjct: 262 VLAWNSRILSSGSRDRNILQHDIRVQSDFVSKLVGHKSEVCGLKWSHDDRELASGGNDNQ 321
Query: 459 IKLWNTLAECKYTIQDEDTA 518
+ +WN ++ E TA
Sbjct: 322 LLVWNNHSQQPILKLTEHTA 341
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 350
GHS + + S DG ++G+ D+TLR W++
Sbjct: 426 GHSMRVLYLATSPDGQTIVTGAGDETLRFWNV 457
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/77 (24%), Positives = 36/77 (46%)
Frame = +3
Query: 231 RYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 410
+ T +G + + V + +G+Y G+ +++WD K R H +A
Sbjct: 205 KVTKLCDLGPNDSVCSVQWTREGSYISIGTSHGQVQVWDGTQCKRVRTMGGHQTRTGVLA 264
Query: 411 FSVDNRQIVSGSRDKTI 461
+ ++R + SGSRD+ I
Sbjct: 265 W--NSRILSSGSRDRNI 279
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/63 (22%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +2
Query: 551 HANPIIVSCGWDRT-VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 727
+ N I+ + G+ + + +W + GHS + + SPDG +G D
Sbjct: 395 NVNEIVSTHGYSQNQIMLWKYPSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRF 454
Query: 728 WDL 736
W++
Sbjct: 455 WNV 457
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 39.1 bits (87), Expect = 0.004
Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 3/131 (2%)
Frame = +3
Query: 180 SRQNSHRVEADQRRKQLRYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG 359
SR S+R A + K H ++ V +++G+ +SGS D+ + LWD G
Sbjct: 32 SRNFSNRFSASENLVLRLEIYKKLEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLG 91
Query: 360 KTTRRFED-HTKDVLSVAFS--VDNRQIVSGSRDKTIKLWNTLAECKYTIQDEDTAIGCH 530
F H +V F D+R IV+ + D ++ + L K E + +G H
Sbjct: 92 NVKLSFHSGHANNVFQAKFMPFSDDRTIVTCAADGMVRRASILEGDKV----ETSFLGLH 147
Query: 531 VSDSHPIMPTP 563
+H + P
Sbjct: 148 QGRAHKLCIEP 158
Score = 33.5 bits (73), Expect = 0.19
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 644 HSGYLNTVTVSPDGSLCASGGKDMKAMLWD 733
H G +NTV+ + +G + SG D + +LWD
Sbjct: 58 HKGCVNTVSFNAEGDVLISGSDDRRVVLWD 87
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 38.7 bits (86), Expect = 0.005
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
Frame = +3
Query: 249 FIGHSHFISDVVLSSDGNYALSGSWDKTLRLWD---LAAGKTTR----RFEDHTKDVLSV 407
++GH+ + + S G SG + +WD +A+ K TR RFE+HT V ++
Sbjct: 245 YLGHTEEVCGLKWSESGKKLASGGNYNVVHIWDHRSVASSKPTRQWLHRFEEHTAAVRAL 304
Query: 408 AFSVDNRQIVS---GSRDKTIKLWNT 476
A+ +++ G D IK WNT
Sbjct: 305 AWCPFQATLLATGGGVGDGKIKFWNT 330
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +3
Query: 315 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 485
G L LW + HT VL +A S + + S + D+ ++LWN E
Sbjct: 362 GFTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVFGE 418
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 38.7 bits (86), Expect = 0.005
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 288 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIK 464
SSDG S D T+++ D GK + H + V F + +IV SGS D ++
Sbjct: 112 SSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEVR 171
Query: 465 LWNT-LAEC 488
LWN EC
Sbjct: 172 LWNAKTGEC 180
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +3
Query: 312 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
SGS D +RLW+ G+ R D + + S+AF + S K + +W+
Sbjct: 163 SGSLDHEVRLWNAKTGECIRT-HDFYRPIASIAFHAGGELLAVASGHK-LHIWH 214
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 38.7 bits (86), Expect = 0.005
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 288 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIK 464
SSDG S D T+++ D GK + H + V F + +IV SGS D ++
Sbjct: 112 SSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEVR 171
Query: 465 LWNT-LAEC 488
LWN EC
Sbjct: 172 LWNAKTGEC 180
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +3
Query: 312 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
SGS D +RLW+ G+ R D + + S+AF + S K + +W+
Sbjct: 163 SGSLDHEVRLWNAKTGECIRT-HDFYRPIASIAFHAGGELLAVASGHK-LHIWH 214
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +3
Query: 294 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN-RQIVSGSRDKTIKLW 470
D ++ SGS D + +W+L K H+ V V+++ N R + S S D+TI++W
Sbjct: 454 DSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
Score = 37.9 bits (84), Expect = 0.009
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Frame = +3
Query: 270 ISDVVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDH--TKDVLSVAFS-VDNRQIV 437
I+ + +S DG + + + + LWDLA K +F H +K V+ F +D+ I
Sbjct: 400 ITSLSISGDGKFFIVNLSCQEIHLWDLAGEWKQPLKFSGHRQSKYVIRSCFGGLDSSFIA 459
Query: 438 SGSRDKTIKLWN 473
SGS D + +WN
Sbjct: 460 SGSEDSQVYIWN 471
Score = 35.1 bits (77), Expect = 0.062
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 6/117 (5%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH-LTNCKLKINHL--GHSGYLNTVTVSPD 682
H + V V+FS ++ + + D T +W L + K+++ H H ++ V+ SPD
Sbjct: 223 HKNEVWFVQFS--NSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWSPD 280
Query: 683 GSLCASGGKDMKAMLWDLNDGKHLHTL---TTMISSLPCASQPTDTGYVLLSDLPSR 844
+ + G LWD++ G HT T + CA P T V S P R
Sbjct: 281 DTKLLTCGNAEVLKLWDVDTGVLRHTFGNNNTGFTVSSCAWFPDSTRLVCGSSDPER 337
Score = 34.3 bits (75), Expect = 0.11
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 204
L GH+ V ++ NPK P M+ S+S D+T+ +W
Sbjct: 481 LSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/82 (23%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Frame = +3
Query: 237 TSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR---RFEDHTKDVLSV 407
T + + H + + V S+ G Y + S D T +W + E H V V
Sbjct: 216 TVQILVAHKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFV 275
Query: 408 AFSVDNRQIVSGSRDKTIKLWN 473
++S D+ ++++ + +KLW+
Sbjct: 276 SWSPDDTKLLTCGNAEVLKLWD 297
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 680 DGSLCASGGKDMKAMLWDLNDGKHLHTLTTMISSLPCAS 796
D S ASG +D + +W+L + K L L+ ++ C S
Sbjct: 454 DSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVS 492
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 38.3 bits (85), Expect = 0.007
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 5/107 (4%)
Frame = +3
Query: 168 LIFLSRQNSHRVEADQRRKQLRYTSKAFIG-----HSHFISDVVLSSDGNYALSGSWDKT 332
L+ S +S R+ KQL+ T G +H S ++ SS N +G +
Sbjct: 39 LVTSSEDDSLRLFDIANAKQLKITYHKKHGTDRVCFTHHPSSLICSSRYNLESTGESLRY 98
Query: 333 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
L ++D + R F+ H V+S+ S N +SGS D++++LW+
Sbjct: 99 LSMYD---NRILRYFKGHKDRVVSLCMSPINDSFMSGSLDRSVRLWD 142
Score = 33.5 bits (73), Expect = 0.19
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF--EDHTKDVLSVAFSVDNR 428
G + ++D+ S+DG L + + + + D G+ F E + F+ D +
Sbjct: 198 GDTAEVNDIKFSNDGKSMLLTTTNNNIYVLDAYRGEKKCGFSLEPSQGTPIEATFTPDGK 257
Query: 429 QIVSGSRDKTIKLWN 473
++SGS D T+ WN
Sbjct: 258 YVLSGSGDGTLHAWN 272
Score = 32.3 bits (70), Expect = 0.44
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +3
Query: 276 DVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 446
+ + DG Y LSGS D TL W++ R+E++ V + ++ V+ S
Sbjct: 249 EATFTPDGKYVLSGSGDGTLHAWNIENPSEVARWENNIGVVSCLKWAPRRAMFVAAS 305
Score = 31.9 bits (69), Expect = 0.58
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
Frame = +3
Query: 192 SHRVEADQRRKQLRYTS-------KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 350
S R + + LRY S + F GH + + +S + +SGS D+++RLWDL
Sbjct: 84 SSRYNLESTGESLRYLSMYDNRILRYFKGHKDRVVSLCMSPINDSFMSGSLDRSVRLWDL 143
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 38.3 bits (85), Expect = 0.007
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Frame = +3
Query: 219 RKQLRYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 398
R Q + SK GH + + S D SG D L +W+ + + ++ +HT V
Sbjct: 322 RCQEDHVSK-LAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYSEHTAAV 380
Query: 399 LSVAFSVDNRQIVS---GSRDKTIKLWNT 476
++A+S +++ G+ D+ I+ WNT
Sbjct: 381 KAIAWSPHVHGLLASGGGTADRCIRFWNT 409
Score = 36.7 bits (81), Expect = 0.020
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 384 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDEDTAIG 524
HT VL +A S D + IV+G+ D+T++ WN K Q+ D+ IG
Sbjct: 464 HTYRVLYLAVSPDGQTIVTGAGDETLRFWNVFPSPK--SQNTDSEIG 508
Score = 36.3 bits (80), Expect = 0.027
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +3
Query: 312 SGSWDKTLRLWDLAAGKT-TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
SGS DK++ D+ + + H +V + +S DNR++ SG D + +WN
Sbjct: 309 SGSRDKSILQRDIRCQEDHVSKLAGHKSEVCGLKWSYDNRELASGGNDNRLFVWN 363
Score = 32.3 bits (70), Expect = 0.44
Identities = 21/77 (27%), Positives = 37/77 (48%)
Frame = +3
Query: 231 RYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 410
+ T +G + V + G + G+ +++WD + K TR E H V ++A
Sbjct: 242 KVTKLCDLGAEDSVCSVGWALRGTHLAVGTSTGKVQIWDASRCKRTRTMEGHRLRVGALA 301
Query: 411 FSVDNRQIVSGSRDKTI 461
+ + + SGSRDK+I
Sbjct: 302 WG--SSVLSSGSRDKSI 316
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 350
GH++ + + +S DG ++G+ D+TLR W++
Sbjct: 463 GHTYRVLYLAVSPDGQTIVTGAGDETLRFWNV 494
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 37.9 bits (84), Expect = 0.009
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +3
Query: 288 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIK 464
S+DG S D T+++ D G + H + V F + +IV SGS D ++
Sbjct: 115 STDGRTLASTHGDHTVKIIDCETGNCLKVLTGHRRTPWVVRFHPHHSEIVASGSLDLEVR 174
Query: 465 LWN-TLAEC 488
LWN T +EC
Sbjct: 175 LWNTTTSEC 183
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/77 (27%), Positives = 35/77 (45%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
GH VRF P+H+ I+ S D V++W+ T + +HL + + ++ +G
Sbjct: 146 GHRRTPWVVRFHPHHSE-IVASGSLDLEVRLWNTTTSECIRSHLFYRP-IASIAFHAEGE 203
Query: 689 LCASGGKDMKAMLWDLN 739
L A K +W N
Sbjct: 204 LLAV-ASGHKLHMWHYN 219
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 37.9 bits (84), Expect = 0.009
Identities = 19/83 (22%), Positives = 37/83 (44%)
Frame = +3
Query: 231 RYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 410
RY+ GH+ + V L + + +D +R+WD+ G + + + ++A
Sbjct: 152 RYSIDTLYGHTEAVRTVFLLASAKLVFTSGYDSIVRMWDMEEGLSIAASKPLGCTIRALA 211
Query: 411 FSVDNRQIVSGSRDKTIKLWNTL 479
D + +V+G D I W +L
Sbjct: 212 --ADTKLLVAGGTDGFIHCWKSL 232
Score = 31.5 bits (68), Expect = 0.76
Identities = 23/82 (28%), Positives = 37/82 (45%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 434
GH I+ + L D SGSWD ++R+WD ++ K + H+ V +A
Sbjct: 255 GHEGPITSLAL--DMTSIFSGSWDMSVRIWDRSSMKCVKTLR-HSDWVWGLAPHETTLAS 311
Query: 435 VSGSRDKTIKLWNTLAECKYTI 500
SGS + +W+ +E I
Sbjct: 312 TSGS---DVYIWDVSSETPLAI 330
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 37.9 bits (84), Expect = 0.009
Identities = 35/144 (24%), Positives = 68/144 (47%), Gaps = 8/144 (5%)
Frame = +3
Query: 147 SEIPGHDLIFLSRQN-SHRVEADQRRKQLRYTSKAFIGHSHFISDVVLSSDGNYALSGSW 323
S + G DL+F Q+ S V + + +GH+ ++ V L N SG+
Sbjct: 228 SLVVGTDLLFAGTQDGSILVWRYNSTTSCFDPAASLLGHT--LAVVSLYVGANRLYSGAM 285
Query: 324 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL----AECK 491
D ++++W L + + +HT V+S+ ++ ++S S D T+K+W E
Sbjct: 286 DNSIKVWSLDNLQCIQTLTEHTSVVMSLI--CWDQFLLSCSLDNTVKIWAATEGGNLEVT 343
Query: 492 YTIQDEDTAI---GCHVSDSHPIM 554
YT ++E + G H +++ P++
Sbjct: 344 YTHKEEYGVLALCGVHDAEAKPVL 367
Score = 34.3 bits (75), Expect = 0.11
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTT 368
GH ++ + L S + + S D+T+R+WD A+G+ T
Sbjct: 142 GHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCT 179
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/56 (19%), Positives = 30/56 (53%)
Frame = +3
Query: 372 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDEDTAIGCHVSD 539
+ + H K V +A + ++ + S+D+T+++W+ + + + +GC +S+
Sbjct: 139 QLDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCTGVLNLGGEVGCIISE 194
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 37.5 bits (83), Expect = 0.012
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Frame = +3
Query: 201 VEADQRRKQLRYTSKAFIGHSHFISDVVLSSDGNYAL-SGSWDKTLRLWDL---AAGKTT 368
+ A + K L + F H + DV Y S D+ L +WDL +A K
Sbjct: 208 INATPKNKSLD-AQQIFKAHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPV 266
Query: 369 RRFEDHTKDVLSVAFSVDNRQIVS-GSRDKTIKLWN 473
+ H+ +V +AF+ N +V+ GS DKT+KL++
Sbjct: 267 QSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFD 302
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 103 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 216
T H V Q+ NPK ++ S + L+VW L+R
Sbjct: 312 TFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSR 349
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 36.3 bits (80), Expect = 0.027
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Frame = +3
Query: 312 SGSWDKTLRLWDLAAGKTTRRFE--DHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL-- 479
SG D ++R+W++ T ++ +H V + S ++SGS DKTI++W +
Sbjct: 868 SGFSDGSIRVWNVNKKIATLLWDIKEHKSTVTCFSLSETGECVLSGSADKTIRVWQIVKG 927
Query: 480 -AECKYTIQDEDT 515
EC I+ +D+
Sbjct: 928 KLECAEVIKTKDS 940
Score = 35.1 bits (77), Expect = 0.062
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +3
Query: 258 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD 395
H ++ LS G LSGS DKT+R+W + GK TKD
Sbjct: 894 HKSTVTCFSLSETGECVLSGSADKTIRVWQIVKGKLECAEVIKTKD 939
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 WD-40
repeats domain (PF00400) (6 weak)
Length = 1120
Score = 36.3 bits (80), Expect = 0.027
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +3
Query: 294 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
D N G D T++++++ + + + H+K + +AFS +VS D + +WN
Sbjct: 877 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 936
Query: 474 T 476
T
Sbjct: 937 T 937
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +3
Query: 324 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA--FSVDNRQIVSGSRDKTIKLW 470
DKT+++WD A G FE H V S+ + + + I S + D IK W
Sbjct: 485 DKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAW 535
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGH 646
H V+ + FS + + +CG D+T+KVW + GH
Sbjct: 461 HVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGH 505
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 WD-40
repeats domain (PF00400) (6 weak)
Length = 1120
Score = 36.3 bits (80), Expect = 0.027
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +3
Query: 294 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
D N G D T++++++ + + + H+K + +AFS +VS D + +WN
Sbjct: 877 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 936
Query: 474 T 476
T
Sbjct: 937 T 937
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +3
Query: 324 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA--FSVDNRQIVSGSRDKTIKLW 470
DKT+++WD A G FE H V S+ + + + I S + D IK W
Sbjct: 485 DKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAW 535
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGH 646
H V+ + FS + + +CG D+T+KVW + GH
Sbjct: 461 HVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGH 505
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 36.3 bits (80), Expect = 0.027
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +3
Query: 294 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
D N G D T++++++ + + + H+K + +AFS +VS D + +WN
Sbjct: 888 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 947
Query: 474 T 476
T
Sbjct: 948 T 948
Score = 35.5 bits (78), Expect = 0.047
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +3
Query: 324 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA--FSVDNRQIVSGSRDKTIKLW 470
DKT+++WD A G FE H V SV + + + I S + D IK W
Sbjct: 485 DKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAW 535
Score = 31.1 bits (67), Expect = 1.0
Identities = 21/90 (23%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Frame = +3
Query: 270 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR---FEDHTKDVLSVAFSVDNRQ--I 434
++ V+ S DG+ ++L+ G+ R+ + H V ++FS N+Q +
Sbjct: 420 VNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDISFSTPNKQLCV 479
Query: 435 VSGSRDKTIKLWNTLAECK-YTIQDEDTAI 521
++ DKTIK+W+ K +T + + +
Sbjct: 480 ITCGDDKTIKVWDAATGVKRHTFEGHEAPV 509
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTV 667
H V+ + FS + +++CG D+T+KVW + GH + +V
Sbjct: 461 HVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSV 512
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 36.3 bits (80), Expect = 0.027
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +3
Query: 294 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
D N G D T++++++ + + + H+K + +AFS +VS D + +WN
Sbjct: 888 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 947
Query: 474 T 476
T
Sbjct: 948 T 948
Score = 35.5 bits (78), Expect = 0.047
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +3
Query: 324 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA--FSVDNRQIVSGSRDKTIKLW 470
DKT+++WD A G FE H V SV + + + I S + D IK W
Sbjct: 485 DKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAW 535
Score = 31.1 bits (67), Expect = 1.0
Identities = 21/90 (23%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Frame = +3
Query: 270 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR---FEDHTKDVLSVAFSVDNRQ--I 434
++ V+ S DG+ ++L+ G+ R+ + H V ++FS N+Q +
Sbjct: 420 VNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDISFSTPNKQLCV 479
Query: 435 VSGSRDKTIKLWNTLAECK-YTIQDEDTAI 521
++ DKTIK+W+ K +T + + +
Sbjct: 480 ITCGDDKTIKVWDAATGVKRHTFEGHEAPV 509
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTV 667
H V+ + FS + +++CG D+T+KVW + GH + +V
Sbjct: 461 HVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSV 512
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 35.1 bits (77), Expect = 0.062
Identities = 25/93 (26%), Positives = 36/93 (38%), Gaps = 7/93 (7%)
Frame = +3
Query: 300 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS-------RDKT 458
N LSG +LRLWD+ A K + +L V F +Q +S S +
Sbjct: 260 NVFLSGGSKGSLRLWDIRANKFVHEYVRDLGPILDVEFIAGGKQFISSSDVSGRNISENA 319
Query: 459 IKLWNTLAECKYTIQDEDTAIGCHVSDSHPIMP 557
+ +W+ E + Q A C HP P
Sbjct: 320 VIVWDISREVPLSNQVYVEAYTCPCIKRHPQDP 352
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +2
Query: 566 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDG-SLCASGGKDMKAMLWDLND 742
++SCG+D T +++ + ++ + V PD ++ SGG LWD+
Sbjct: 220 LLSCGYDCTSRLFDVER-GVETQSFKEDEVVGVVKFHPDNCNVFLSGGSKGSLRLWDIRA 278
Query: 743 GKHLH 757
K +H
Sbjct: 279 NKFVH 283
>At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
mRNA-associated protein mrnp 41 (SP:P78406) [Homo
sapiens]; similar to mitotic checkpoint protein
GI:9294423 from [Arabidopsis thaliana]
Length = 140
Score = 35.1 bits (77), Expect = 0.062
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 5/88 (5%)
Frame = +2
Query: 515 SDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINH-----LGHSGYLNTVTVSP 679
+D +S + FSP I+V+ WD V+ W +T I + H +
Sbjct: 26 TDSISSLSFSPKA--DILVATSWDCQVRCWEITRSDGSIASEPKVSMSHDQPVLCSAWKD 83
Query: 680 DGSLCASGGKDMKAMLWDLNDGKHLHTL 763
DG+ +GG D +A +W L G T+
Sbjct: 84 DGTTVFTGGCDKQAKMWPLLSGAQPSTV 111
Score = 35.1 bits (77), Expect = 0.062
Identities = 19/74 (25%), Positives = 30/74 (40%)
Frame = +3
Query: 243 KAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 422
K + H + DG +G DK ++W L +G H +A+
Sbjct: 67 KVSMSHDQPVLCSAWKDDGTTVFTGGCDKQAKMWPLLSGAQPSTVAMHDAPFNQIAWIPG 126
Query: 423 NRQIVSGSRDKTIK 464
+V+GS DKT+K
Sbjct: 127 MNLLVTGSWDKTLK 140
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Frame = +3
Query: 270 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE-----DHTKDVLSVAFSVDNRQI 434
IS + S + ++ SWD +R W++ + E H + VL A+ D +
Sbjct: 29 ISSLSFSPKADILVATSWDCQVRCWEITRSDGSIASEPKVSMSHDQPVLCSAWKDDGTTV 88
Query: 435 VSGSRDKTIKLWNTLA 482
+G DK K+W L+
Sbjct: 89 FTGGCDKQAKMWPLLS 104
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 35.1 bits (77), Expect = 0.062
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Frame = +3
Query: 252 IGHSHFISDVVLSSDGN----YALSGSWDKTLRLWDLAAG 359
+GHS FI+ S Y +SGS D T+RLWD+ +G
Sbjct: 200 LGHSEFITCTAFVSTPELTQGYLMSGSGDSTVRLWDITSG 239
>At5g45760.2 68418.m05626 transducin family protein / WD-40 repeat
family protein
Length = 334
Score = 34.7 bits (76), Expect = 0.082
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 509 GHSDWVSCVRFSP-NHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLN 661
GH+ VSCV FS ++S G D+TVK+W C N+ +S L+
Sbjct: 246 GHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCFKCLDPNNNNNNSDLLH 297
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +3
Query: 384 HTKDVLSVAFSV---DNRQIVSGSRDKTIKLWN 473
H V VAFS+ R ++SG DKT+K+W+
Sbjct: 247 HNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWD 279
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +3
Query: 255 GHSHFISDVVLS---SDGNYALSGSWDKTLRLWD 347
GH+ +S V S G + +SG DKT+++WD
Sbjct: 246 GHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWD 279
>At5g45760.1 68418.m05625 transducin family protein / WD-40 repeat
family protein
Length = 360
Score = 34.7 bits (76), Expect = 0.082
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 509 GHSDWVSCVRFSP-NHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLN 661
GH+ VSCV FS ++S G D+TVK+W C N+ +S L+
Sbjct: 272 GHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCFKCLDPNNNNNNSDLLH 323
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +3
Query: 384 HTKDVLSVAFSV---DNRQIVSGSRDKTIKLWN 473
H V VAFS+ R ++SG DKT+K+W+
Sbjct: 273 HNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWD 305
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +3
Query: 255 GHSHFISDVVLS---SDGNYALSGSWDKTLRLWD 347
GH+ +S V S G + +SG DKT+++WD
Sbjct: 272 GHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWD 305
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 34.7 bits (76), Expect = 0.082
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +3
Query: 324 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA-FSVDNRQ-IVSGSRDKTIKLW 470
DKT+++WD G FE H V SV +N Q I S + D IK W
Sbjct: 487 DKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAW 537
Score = 31.9 bits (69), Expect = 0.58
Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Frame = +3
Query: 270 ISDVVLSSDGNYALSGSWDKTL-RLWDLAAGKTTRR---FEDHTKDVLSVAFSVDNRQ-- 431
++ VV S DG L ++ K + ++ G+ R + H +V +AFS N+Q
Sbjct: 422 VNRVVWSPDGGL-LGVAYSKHIVHIYSYHGGEDLRNHLEIDAHAGNVNDLAFSQPNQQLC 480
Query: 432 IVSGSRDKTIKLWNTLAECK-YTIQDEDTAI 521
+V+ DKTIK+W+ + K +T + + +
Sbjct: 481 VVTCGEDKTIKVWDAVTGNKLHTFEGHEAPV 511
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = +3
Query: 294 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
D N G D +++++++ + + + H K V +AFS +VS D + +W+
Sbjct: 898 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWS 957
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Frame = +2
Query: 632 NHL---GHSGYLNTVTVS-PDGSLCA-SGGKDMKAMLWDLNDGKHLHT 760
NHL H+G +N + S P+ LC + G+D +WD G LHT
Sbjct: 456 NHLEIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHT 503
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 604
H+ V+ + FS + +V+CG D+T+KVW
Sbjct: 463 HAGNVNDLAFSQPNQQLCVVTCGEDKTIKVW 493
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 34.7 bits (76), Expect = 0.082
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +3
Query: 324 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA-FSVDNRQ-IVSGSRDKTIKLW 470
DKT+++WD G FE H V SV +N Q I S + D IK W
Sbjct: 487 DKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAW 537
Score = 31.9 bits (69), Expect = 0.58
Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Frame = +3
Query: 270 ISDVVLSSDGNYALSGSWDKTL-RLWDLAAGKTTRR---FEDHTKDVLSVAFSVDNRQ-- 431
++ VV S DG L ++ K + ++ G+ R + H +V +AFS N+Q
Sbjct: 422 VNRVVWSPDGGL-LGVAYSKHIVHIYSYHGGEDLRNHLEIDAHAGNVNDLAFSQPNQQLC 480
Query: 432 IVSGSRDKTIKLWNTLAECK-YTIQDEDTAI 521
+V+ DKTIK+W+ + K +T + + +
Sbjct: 481 VVTCGEDKTIKVWDAVTGNKLHTFEGHEAPV 511
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = +3
Query: 294 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
D N G D +++++++ + + + H K V +AFS +VS D + +W+
Sbjct: 898 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWS 957
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Frame = +2
Query: 632 NHL---GHSGYLNTVTVS-PDGSLCA-SGGKDMKAMLWDLNDGKHLHT 760
NHL H+G +N + S P+ LC + G+D +WD G LHT
Sbjct: 456 NHLEIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHT 503
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 604
H+ V+ + FS + +V+CG D+T+KVW
Sbjct: 463 HAGNVNDLAFSQPNQQLCVVTCGEDKTIKVW 493
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 34.7 bits (76), Expect = 0.082
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Frame = +3
Query: 219 RKQLR-YTSKAFI---GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 362
RK LR Y + ++ GH+ ++ + S G + SGS D ++R+W++ G+
Sbjct: 405 RKDLRPYPNSCYLEYKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGR 456
Score = 31.5 bits (68), Expect = 0.76
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +2
Query: 629 INHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHL 754
+ + GH+G + +++ G ASG D +W++ G+ L
Sbjct: 417 LEYKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCL 458
Score = 31.5 bits (68), Expect = 0.76
Identities = 19/73 (26%), Positives = 33/73 (45%)
Frame = +3
Query: 375 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDEDTAIGCHVSDSHPIM 554
++ HT V S++ I SGS D ++++W + D AI C +P+
Sbjct: 419 YKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVWQFDEAIMCVA--WNPLS 476
Query: 555 PTPLLYPVVGTEL 593
P+L +G +L
Sbjct: 477 RLPVLAVAMGRDL 489
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 34.7 bits (76), Expect = 0.082
Identities = 22/60 (36%), Positives = 29/60 (48%)
Frame = +3
Query: 294 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
D + S D +R D AGK H K V V +S Q+++GS DKTIK W+
Sbjct: 67 DDSSGFSVCADTKVRRIDFNAGKEDV-LGTHEKPVRCVEYSYAAGQVITGSWDKTIKCWD 125
Score = 32.3 bits (70), Expect = 0.44
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +3
Query: 270 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN 425
IS++ S++ ++ L SWDK++RL+D A G R H VL F D+
Sbjct: 19 ISNLRFSNNSDHLLVSSWDKSVRLYD-ANGDLMRGEFKHGGAVLDCCFHDDS 69
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +3
Query: 165 DLIFLSRQNSHRVEADQRRKQLRYTS--KAFIG-HSHFISDVVLSSDGNYALSGSWDKTL 335
D F + V AD + +++ + + + +G H + V S ++GSWDKT+
Sbjct: 62 DCCFHDDSSGFSVCADTKVRRIDFNAGKEDVLGTHEKPVRCVEYSYAAGQVITGSWDKTI 121
Query: 336 RLWDLAAGKTTRR 374
+ WD T R
Sbjct: 122 KCWDPRGASGTER 134
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +2
Query: 656 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLTTMISSLPCASQPTDTGYVLLS 829
+N + P ASGG D +WD N+ K L+ + +S+ S D G + ++
Sbjct: 243 VNAIAFHPIYGTFASGGCDGFVNIWDGNNKKRLYQYSKYPTSIAALSFSRDGGLLAVA 300
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +3
Query: 258 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF--EDHTKDVLSVAFSVDNRQ 431
H +++ +V + + + +S S DKTLR+WDL T + F + H V FS+ +
Sbjct: 453 HDGYVTKLV-APESHLLVSSSLDKTLRIWDLRKSWTPQPFVVKGHNDGV--SGFSIWGKD 509
Query: 432 IVSGSRD 452
++S SR+
Sbjct: 510 VISISRN 516
Score = 32.3 bits (70), Expect = 0.44
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +1
Query: 109 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 216
R H+G+VT++ + +++SSS DKTL +W L +
Sbjct: 451 RAHDGYVTKLVAPESH--LLVSSSLDKTLRIWDLRK 484
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 34.3 bits (75), Expect = 0.11
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Frame = +3
Query: 237 TSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLW-------DLAAGKTTRRFED-HTK 392
T GHS + V+ + S S+D T+++W D +T + H+
Sbjct: 131 TIAVLTGHSEDVKMVLWHPTMDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSS 190
Query: 393 DVLSVAFSVDNRQIVSGSRDKTIKLWNT 476
V S++F+ ++V+ S D +K+W T
Sbjct: 191 TVWSISFNAAGDKMVTCSDDLAVKIWKT 218
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 8/82 (9%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLT------NCKLKINHL--GHSGYLNT 664
GHS+ V V + P ++ SC +D T+K+W NC ++ L GHS + +
Sbjct: 137 GHSEDVKMVLWHPTM--DVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWS 194
Query: 665 VTVSPDGSLCASGGKDMKAMLW 730
++ + G + D+ +W
Sbjct: 195 ISFNAAGDKMVTCSDDLAVKIW 216
Score = 31.5 bits (68), Expect = 0.76
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 207
L GH V +A NP +I S S DKT+ +W+
Sbjct: 16 LEGHTDRVWNVAWNPAADGVIASCSADKTVRIWE 49
Score = 31.5 bits (68), Expect = 0.76
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 604
GH+D V V ++P A+ +I SC D+TV++W
Sbjct: 18 GHTDRVWNVAWNPA-ADGVIASCSADKTVRIW 48
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK-----TTRRFEDHTKDVLSVAFSV 419
GH + V ++ G+ + DK++ +W++ + T H++DV V +
Sbjct: 90 GHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAVLTGHSEDVKMVLWHP 149
Query: 420 DNRQIVSGSRDKTIKLW 470
+ S S D TIK+W
Sbjct: 150 TMDVLFSCSYDNTIKIW 166
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/58 (24%), Positives = 34/58 (58%)
Frame = +1
Query: 55 LFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENN 228
+++ F+ SE++ + LRGH V ++ N ++ + RDK++ +W++ +E++
Sbjct: 74 VWENFATDSESVSV---LRGHESEVKSVSWNAS-GSLLATCGRDKSVWIWEIQPEEDD 127
>At3g13300.2 68416.m01675 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1309
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 94 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ 243
LR RGH+ VT +A + DM+ S S D + VWK++ PQ
Sbjct: 194 LRSLFRGHSQRVTDMAFFAEDVDMLASVSLDGKVFVWKISEGSEGEDQPQ 243
>At3g13300.1 68416.m01674 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1344
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 94 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ 243
LR RGH+ VT +A + DM+ S S D + VWK++ PQ
Sbjct: 229 LRSLFRGHSQRVTDMAFFAEDVDMLASVSLDGKVFVWKISEGSEGEDQPQ 278
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 103 TLRGHNGWVTQIA-TNPKYPDMILSSSRDKTLIVWK 207
TL GH G V Q+A +PK+ ++ S S D +I+WK
Sbjct: 51 TLTGHRGPVWQVAWAHPKFGSLLASCSYDGQIILWK 86
Score = 31.5 bits (68), Expect = 0.76
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Frame = +2
Query: 566 IVSCGWDRTVKVWHLTNCKLKINHL----GHSGYLNTVTVSPD----GSLCASGGKDMKA 721
+ S G D TVKVW +N K++ H+ ++ V +P+ S ASG +D K
Sbjct: 179 LASGGCDSTVKVWKFSNGSWKMDCFPALNKHTDWVRDVAWAPNLGLPKSTIASGSEDGKV 238
Query: 722 MLWDL 736
++W +
Sbjct: 239 IIWTI 243
>At1g80710.1 68414.m09470 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to damage-specific DNA-binding protein 2 (DDB2)
[Mus musculus]
Length = 516
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +3
Query: 339 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIKLWN 473
+WDL AGK+ +E H + + S+ F+ N ++ + S D T LW+
Sbjct: 332 VWDLRAGKSVFHWELHERRINSIDFNPQNPHVMATSSTDGTACLWD 377
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 33.9 bits (74), Expect = 0.14
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVS--PD 682
GH+ VS VRF +V+ G D +K+W + + ++ + GH N V +S +
Sbjct: 111 GHTKTVSYVRFLDGGT---VVTAGTDGCLKLWSVEDGRVIRTYEGHVNNRNFVGLSVWRN 167
Query: 683 GSLCASGGKDMKAMLWDLNDGK 748
G+L G ++ + ++D GK
Sbjct: 168 GALFGCGSENNRVFVYDRRWGK 189
Score = 33.5 bits (73), Expect = 0.19
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +2
Query: 524 VSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP--DGSLCA 697
V CV F P+ + V C DR V+ + KL L G+ TV+ DG
Sbjct: 72 VCCVEFDPSGGPAVAVGCA-DRKGYVYDIR--KLVDPALTLQGHTKTVSYVRFLDGGTVV 128
Query: 698 SGGKDMKAMLWDLNDGKHLHT 760
+ G D LW + DG+ + T
Sbjct: 129 TAGTDGCLKLWSVEDGRVIRT 149
Score = 31.5 bits (68), Expect = 0.76
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 419
GH+ +S V G +G+ D L+LW + G+ R +E H + V SV
Sbjct: 111 GHTKTVSYVRFLDGGTVVTAGT-DGCLKLWSVEDGRVIRTYEGHVNNRNFVGLSV 164
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 33.9 bits (74), Expect = 0.14
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 103 TLRGHNGWVTQIA-TNPKYPDMILSSSRDKTLIVWK 207
TL GH G V ++A +PKY ++ S S D +I+WK
Sbjct: 51 TLTGHRGPVWEVAWAHPKYGSILASCSYDGQVILWK 86
Score = 32.7 bits (71), Expect = 0.33
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Frame = +2
Query: 566 IVSCGWDRTVKVWHLTNCKLKINHL----GHSGYLNTVTVSPD----GSLCASGGKDMKA 721
+ S G D TVKVW L N K++ H+ ++ V +P+ S ASG +D K
Sbjct: 179 LASGGCDNTVKVWKLANGSWKMDCFPALQKHTDWVRDVAWAPNLGLPKSTIASGSQDGKV 238
Query: 722 MLW 730
++W
Sbjct: 239 IIW 241
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 33.9 bits (74), Expect = 0.14
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +3
Query: 258 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTT 368
H ++ + ++DG Y LS D +RLWD+ +G+ T
Sbjct: 311 HYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGRNT 347
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/49 (22%), Positives = 29/49 (59%)
Frame = +3
Query: 327 KTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
KT++ + + +G+TT H + V + F+ +++++ + D+ I +W+
Sbjct: 379 KTVKAFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGSDRQILVWS 427
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +2
Query: 644 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKH 751
H G + + + DG S G D + LWD+ G++
Sbjct: 311 HYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGRN 346
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 WD-40
repeats (PF00400) (2 weak)
Length = 1108
Score = 33.1 bits (72), Expect = 0.25
Identities = 15/60 (25%), Positives = 27/60 (45%)
Frame = +3
Query: 294 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
D N G D T+ ++++ + + + H K + +AFS +VS D I W+
Sbjct: 873 DNNVIAIGMEDSTIHIYNVRVDEVKSKLKGHQKRITGLAFSTALNILVSSGADAQICFWS 932
>At4g21520.1 68417.m03110 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to guanine nucleotide-binding protein beta 5
(GI:1001939) [Mesocricetus auratus]
Length = 425
Score = 33.1 bits (72), Expect = 0.25
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 509 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 688
G + +S + FSP ++ + V + +T ++ N +L G G + V S DG+
Sbjct: 210 GQAGILSTLAFSPTNSGMLAVG-SYGQTTGIYREDNMELLYVLHGQEGGVTHVQFSKDGN 268
Query: 689 LCASGG-KDMKAMLWDL 736
+GG KD + WD+
Sbjct: 269 YLYTGGRKDPYILCWDI 285
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400);
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]
Length = 837
Score = 33.1 bits (72), Expect = 0.25
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 288 SSDGNYALSGSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 464
S G GS D + +DL K H+K V V F VD+ +VS S D T+K
Sbjct: 670 SDSGRSLAFGSADHKVYYYDLRNPKIPLCTMIGHSKTVSYVKF-VDSSTLVSSSTDNTLK 728
Query: 465 LWN 473
LW+
Sbjct: 729 LWD 731
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 312 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF-SVDNRQIVSGSRDKT 458
S ++D +++WD+A + ++H K V S+ S D + SGS D T
Sbjct: 601 SSNFDGVVQIWDVARSQLVTEMKEHKKRVWSIDISSADPTLLASGSDDGT 650
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 33.1 bits (72), Expect = 0.25
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Frame = +2
Query: 488 QVYHPR*GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLG-HSGYLNT 664
Q+ H H V+ + F+P + ++ + D TV ++ L ++ + H G +
Sbjct: 251 QMQHQVKVHEREVNYLSFNPFN-EWVLATASSDSTVALFDLRKLNAPLHVMSSHEGEVFQ 309
Query: 665 VTVSPDG-SLCASGGKDMKAMLWDLN 739
V P+ ++ AS G+D + M+WDLN
Sbjct: 310 VEWDPNHETVLASSGEDRRLMVWDLN 335
Score = 33.1 bits (72), Expect = 0.25
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 216
+ H G V Q+ +P + ++ SS D+ L+VW L R
Sbjct: 300 MSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNR 336
Score = 31.5 bits (68), Expect = 0.76
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Frame = +3
Query: 303 YALSGSWDKTLRLWDLAAGKTTR------RFEDHTKDVLSVAFSVDNRQIV-SGSRDKTI 461
Y LSGS D+ + LWD++A + +E H + V++ + N + S D +
Sbjct: 183 YLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWHMKNENLFGSAGEDGRL 242
Query: 462 KLWNT 476
+W+T
Sbjct: 243 VIWDT 247
>At1g76260.1 68414.m08855 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to retinoblastoma A associated protein; RbAp48
(GI:3309245) [Xenopus laevis]
Length = 350
Score = 33.1 bits (72), Expect = 0.25
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 204
L GH W + NP+Y ++ILS D + +W
Sbjct: 248 LPGHTHWTWAVRCNPEYEELILSVGTDSAVNLW 280
>At1g20540.1 68414.m02559 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Rbap46 polypeptide (GI:9454362) [Gallus
gallus]
Length = 351
Score = 33.1 bits (72), Expect = 0.25
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 204
L GH W + NP+Y +ILS+ D + +W
Sbjct: 248 LPGHTHWTWAVRCNPEYDGLILSAGTDSVVNLW 280
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +1
Query: 79 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 210
SET+ +L GH V +I T P P +++++S+D+++ +W +
Sbjct: 117 SETI--HKSLVGHGDSVNEIRTQPLKPQLVITASKDESVRLWNV 158
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 629 INHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLT 766
+ H +N ++SPDG L A G + + ++ D N GK L TL+
Sbjct: 271 VKHFRFPWPVNHASLSPDGKLLAIVGDNPEGLIVDPNTGKTLETLS 316
Score = 27.9 bits (59), Expect = 9.4
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +3
Query: 270 ISDVVLSSDGNY-ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 446
++ LS DG A+ G + L + D GKT H + A+ D +G+
Sbjct: 280 VNHASLSPDGKLLAIVGDNPEGL-IVDPNTGKTLETLSGHLDFSFASAWHPDGVTFSTGN 338
Query: 447 RDKTIKLWN 473
+DKT ++W+
Sbjct: 339 QDKTCRVWD 347
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 32.7 bits (71), Expect = 0.33
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 644 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGK 748
HS +N + S DG+ SGG++ ++W L+ GK
Sbjct: 282 HSAEVNVLNFSSDGAYLYSGGREGVLVVWQLDTGK 316
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 258 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 362
HS ++ + SSDG Y SG + L +W L GK
Sbjct: 282 HSAEVNVLNFSSDGAYLYSGGREGVLVVWQLDTGK 316
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 32.3 bits (70), Expect = 0.44
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Frame = +2
Query: 488 QVYHPR*GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLG-HSGYLNT 664
Q+ H H ++ + F+P + ++ + D TV ++ L ++ L H G +
Sbjct: 252 QMQHQVKVHEREINYLSFNPFN-EWVLATASSDSTVALFDLRKLTAPLHVLSKHEGEVFQ 310
Query: 665 VTVSPDG-SLCASGGKDMKAMLWDLN 739
V P+ ++ AS G+D + M+WD+N
Sbjct: 311 VEWDPNHETVLASSGEDRRLMVWDIN 336
Score = 32.3 bits (70), Expect = 0.44
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 106 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 216
L H G V Q+ +P + ++ SS D+ L+VW + R
Sbjct: 301 LSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINR 337
Score = 31.5 bits (68), Expect = 0.76
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Frame = +3
Query: 303 YALSGSWDKTLRLWDLAAGKTTR------RFEDHTKDVLSVAFSVDNRQIV-SGSRDKTI 461
Y LSGS D+ + LWD++A T + +E H + VA+ + N I S D +
Sbjct: 184 YLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIFGSAGDDCQL 243
Query: 462 KLWN 473
+W+
Sbjct: 244 VIWD 247
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 32.3 bits (70), Expect = 0.44
Identities = 15/71 (21%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Frame = +3
Query: 285 LSSDGNYALSGSWDKTLRLWDLAAGKT--------TRRFEDHTKDVLSVAFSVDNRQIVS 440
+S +G + + ++ +++W++ K + + H V + FS ++ QI++
Sbjct: 247 VSPNGRFLAAAAFTADVKVWEIVYQKDGSVKEVSRVMQLKGHKSAVTWLCFSPNSEQIIT 306
Query: 441 GSRDKTIKLWN 473
S+D +I++WN
Sbjct: 307 ASKDGSIRVWN 317
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 32.3 bits (70), Expect = 0.44
Identities = 19/80 (23%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +3
Query: 165 DLIFLSRQNSHRVEADQRRKQLRYTSKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLW 344
DL+++ + D K +R + + + ++V S +G Y L+ S D+T+R++
Sbjct: 186 DLVYIGNSKGEILIVDY--KSVRVLALVSASGAAPVKNIVFSRNGQYLLTNSHDRTIRIY 243
Query: 345 D--LAAGKTTRRFEDHTKDV 398
+ L A + ED K++
Sbjct: 244 ENLLPAKNVLKSLEDLGKNI 263
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 32.3 bits (70), Expect = 0.44
Identities = 18/74 (24%), Positives = 35/74 (47%)
Frame = +2
Query: 635 HLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLTTMISSLPCASQPTDTG 814
H+G G +N++ S DG+ A+ G+D ++D + K + + + +L C + D
Sbjct: 300 HIGQ-GAINSIAFSNDGAYLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGK 358
Query: 815 YVLLSDLPSRSGIW 856
Y+L +W
Sbjct: 359 YLLTGGEDDLVQVW 372
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 288 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 413
S DG Y L+G D +++W + K E H V VAF
Sbjct: 354 SMDGKYLLTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 395
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/75 (24%), Positives = 34/75 (45%)
Frame = +2
Query: 524 VSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 703
++ + FS + A + + G D ++++ + KL + G L S DG +G
Sbjct: 306 INSIAFSNDGA--YLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTG 363
Query: 704 GKDMKAMLWDLNDGK 748
G+D +W + D K
Sbjct: 364 GEDDLVQVWSMEDRK 378
>At5g58760.1 68418.m07360 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
damage-specific DNA binding protein 2 (GI:10798819)
[Homo sapiens]
Length = 557
Score = 31.9 bits (69), Expect = 0.58
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +2
Query: 563 IIVSCGWDRTVKVWHLTNC--KLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWD 733
+++SCG D ++W + K ++ L H +N+ SP G+ + +D + +WD
Sbjct: 327 LLLSCGNDHFARIWDMRKLQPKASLHDLAHKRVVNSAYFSPSSGTKILTTCQDNRIRIWD 386
>At4g34280.1 68417.m04873 transducin family protein / WD-40 repeat
family protein similar to TUPA (GI:11066216) [Emericella
nidulans]; similar to damage-specific DNA binding
protein 2, Homo sapiens ,PIR2:I38909; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies,1
weak)|19797453|gb|AU229277.1|AU229277
Length = 783
Score = 31.9 bits (69), Expect = 0.58
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +3
Query: 258 HSHFISDVVLSSDGNYALS-GSWDKTLRLWDLAAGKTTRRF-EDHTKDVLSVAFSVDNRQ 431
H I+ V S+ + + S+DK ++LWDL + + TK + V FS D+R
Sbjct: 582 HQEHINVVKFSNHSPFLFATSSFDKDVKLWDLRQEPSRPCYTASSTKGNVMVCFSPDDRY 641
Query: 432 IVSGSRDKTIK 464
+++ + D ++
Sbjct: 642 LLASAVDNEVR 652
Score = 28.3 bits (60), Expect = 7.1
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNT-VTVSPDGS 688
H + ++ V+FS NH+ + + +D+ VK+W L + + S N V SPD
Sbjct: 582 HQEHINVVKFS-NHSPFLFATSSFDKDVKLWDLRQEPSRPCYTASSTKGNVMVCFSPDDR 640
Query: 689 LCASGGKDMKAMLWDLNDGK-HLH-TLTTMISSL 784
+ D + DG+ HL+ + +SS+
Sbjct: 641 YLLASAVDNEVRQLLTVDGRLHLNFEIVPRVSSM 674
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 31.9 bits (69), Expect = 0.58
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +2
Query: 563 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 739
++VS TV+ W + L H H G +NT+ +P + S G D + +L+ L+
Sbjct: 261 VLVSGDSTGTVQFWDSEHGTLLEAHSNHKGDVNTLAAAPSHNRVFSAGADGQVILYKLS 319
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = +2
Query: 647 SGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLTTMISSLPCASQ 799
SG +VT SPD SG D WD ++ +T + L +S+
Sbjct: 198 SGRALSVTWSPDAKRIFSGSSDGLIRCWDATSCHEVYRITAGLGGLGSSSE 248
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 31.9 bits (69), Expect = 0.58
Identities = 29/85 (34%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Frame = +2
Query: 491 VYHPR*GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL---TNCKLKINHLGHSGYLN 661
VYH GH D V V FSP A S G D + +W TN K+ H L+
Sbjct: 287 VYH---GHEDTVEDVAFSPTSAQE-FCSVGDDSCLILWDARTGTNPVTKVEK-AHDADLH 341
Query: 662 TVTVSP-DGSLCASGGKDMKAMLWD 733
V +P D +L +G D L+D
Sbjct: 342 CVDWNPHDDNLILTGSADNTVRLFD 366
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +1
Query: 79 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 204
S T+ RG GH V +A +P S D LI+W
Sbjct: 279 SPTVGPRGVYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILW 320
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 31.9 bits (69), Expect = 0.58
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +3
Query: 339 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
LW++ K R + H+ V + FS D+ ++S SRD+ +++
Sbjct: 631 LWEVGTWKAVGRLQSHSLTVTHLEFSYDDTLLLSVSRDRHFSVFS 675
Score = 31.9 bits (69), Expect = 0.58
Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Frame = +3
Query: 258 HSHFISDVVLSSDGNYALSGSWDKTLRLWDL-------AAGKTTRRFEDHTKDVLSVAFS 416
HS ++ + S D LS S D+ ++ + + K + E H + + + +++
Sbjct: 646 HSLTVTHLEFSYDDTLLLSVSRDRHFSVFSIQRTDNGEVSHKLMAKVEAHKRIIWACSWN 705
Query: 417 VDNRQIVSGSRDKTIKLWN 473
Q + SRDKT+K+W+
Sbjct: 706 PFGHQFATSSRDKTVKIWS 724
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 8/43 (18%)
Frame = +1
Query: 106 LRGHNGWVTQIA------TNPKYPD--MILSSSRDKTLIVWKL 210
L+GH W+ + T + P+ M++SSS+DK + +WKL
Sbjct: 219 LKGHTDWIRSLDFSLPLHTTEEIPNSIMLVSSSQDKVIRIWKL 261
Score = 29.5 bits (63), Expect = 3.1
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 13/85 (15%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED-----------HTKDVL 401
GH ++DV + G Y LS S D+T R++ ED H D+
Sbjct: 413 GHFAAVTDVTWARTGEYLLSVSQDQTTRVFSAWKNDEGNEAEDEHWHELARPQVHGHDIN 472
Query: 402 SVAF--SVDNRQIVSGSRDKTIKLW 470
VA N + VSG+ +K ++++
Sbjct: 473 CVAMVQGKGNHRFVSGAEEKVVRVF 497
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 7/41 (17%)
Frame = +2
Query: 509 GHSDWVSCVRFS-PNHANP------IIVSCGWDRTVKVWHL 610
GH+DW+ + FS P H ++VS D+ +++W L
Sbjct: 221 GHTDWIRSLDFSLPLHTTEEIPNSIMLVSSSQDKVIRIWKL 261
>At4g11270.1 68417.m01823 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TGF-beta resistance-associated protein TRAG
(GI:15624071) {Mus musculus}; similar to
beta-transducin repeats containing protein - Homo
sapiens,PID:e1284220; 3' EST no_NP:TC8031
Length = 1446
Score = 31.5 bits (68), Expect = 0.76
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +3
Query: 216 RRKQLRYTSKAFIGHSH-FISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 392
+++ L +T +H D + + +SGS D T+R+WDL +G H
Sbjct: 521 KQRLLGHTGSVLCLAAHRMFGDANGCNSSHVLISGSMDCTIRIWDLESGNVIMIMHHHVA 580
Query: 393 DVLSVAFS 416
V + S
Sbjct: 581 PVRQIILS 588
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 31.5 bits (68), Expect = 0.76
Identities = 22/80 (27%), Positives = 37/80 (46%)
Frame = +2
Query: 623 LKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLTTMISSLPCASQP 802
L+ +HL YL T +P+G A+ G D + +LWD+ D K + C S
Sbjct: 233 LRGDHLEAICYL---TWAPNGKYIATSGLDKQVLLWDV-DKKQDIDRHKFEERICCMSWK 288
Query: 803 TDTGYVLLSDLPSRSGIWKA 862
+ + + D R G+W++
Sbjct: 289 PNGNALSVIDAKGRYGVWES 308
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/72 (23%), Positives = 32/72 (44%)
Frame = +2
Query: 548 NHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 727
N + ++ + G D +K+ + + + GH G + + P+G L AS +
Sbjct: 113 NGSGSLLAAAGDDEGIKLINTFDGSIVRVLKGHKGPVTGLDFHPNGELLASIDTTGTVLC 172
Query: 728 WDLNDGKHLHTL 763
W+L +G TL
Sbjct: 173 WELQNGVVSFTL 184
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 31.5 bits (68), Expect = 0.76
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 384 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
H K V V +S Q+++GS DKT+K W+
Sbjct: 97 HDKAVRCVEYSYAAGQVITGSWDKTVKCWD 126
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +3
Query: 270 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 422
IS++ S++ ++ L SWDK +RL+D++ F H VL F D
Sbjct: 20 ISNLRFSNNSDHLLVSSWDKRVRLYDVSTNSLKGEFL-HGGAVLDCCFHDD 69
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 258 HSHFISDVVLSSDGNYALSGSWDKTLRLWD 347
H + V S ++GSWDKT++ WD
Sbjct: 97 HDKAVRCVEYSYAAGQVITGSWDKTVKCWD 126
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 604
H V CV +S +A +++ WD+TVK W
Sbjct: 97 HDKAVRCVEYS--YAAGQVITGSWDKTVKCW 125
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 258 HSHFISDVVLSSDGNYALSGSWDKTLRLWD 347
H ++D+ SSD ++ +S S D T+++WD
Sbjct: 1080 HRSAVNDIATSSDHSFFVSASDDSTVKVWD 1109
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 357 GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 476
G ++H V +A S D+ VS S D T+K+W++
Sbjct: 1071 GVLVAHLQEHRSAVNDIATSSDHSFFVSASDDSTVKVWDS 1110
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 267 FISDVVLSSDGNYALSGSWDKTLRLWDL 350
++S +V S GN+ +SGS L LWDL
Sbjct: 1235 YVSSLVTSPCGNWFVSGSSRGVLTLWDL 1262
>At3g59850.1 68416.m06679 polygalacturonase, putative / pectinase,
putative similar to SP|P48979 Polygalacturonase
precursor (EC 3.2.1.15) (PG) (Pectinase) {Prunus
persica}; contains PF00295: Glycosyl hydrolases family
28 (polygalacturonases)
Length = 388
Score = 31.1 bits (67), Expect = 1.0
Identities = 49/186 (26%), Positives = 80/186 (43%), Gaps = 5/186 (2%)
Frame = +2
Query: 314 RFLGQDFAFVGSRCRQDYQTIRGPY*GCTLGSLLS*QPSDSVWFSRQDYQTL-EHPCGVQ 490
RFL + F GS+C++ T R G+L++ PSD +++Y L +H G+
Sbjct: 64 RFLLRSIIFDGSKCKRKSVTFR------IQGTLVA--PSDYRVIGKENYWILFQHLDGIS 115
Query: 491 VYH---PR*GHSDWVSCVRFSPN-HANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYL 658
VY G S W SC + N + + R V + LT+ ++ H+ +G
Sbjct: 116 VYGGVLDAQGASLW-SCKKSGKNCPSGATSIGFQSSRNVVISGLTSLNSQMFHVAINGCS 174
Query: 659 NTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLTTMISSLPCASQPTDTGYVLLSDLP 838
N V DG ++ G DG H+ + +T +S L + TG +S P
Sbjct: 175 N---VKLDGVKVSADGNSPN------TDGIHVQSSST-VSIL---NSKISTGDDCVSIGP 221
Query: 839 SRSGIW 856
+G+W
Sbjct: 222 GTNGLW 227
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +3
Query: 270 ISDVVLSSDGNY-ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 446
++++ S DG A+ G + L L D +GK E H S A+ + + + +G+
Sbjct: 280 VNNISTSPDGKLVAVLGDSPECL-LADTGSGKVIHGLEGHLDYSFSSAWHPNGQILATGN 338
Query: 447 RDKTIKLWN 473
+D T +LW+
Sbjct: 339 QDTTCRLWD 347
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 641 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 742
GH Y + P+G + A+G +D LWD+ +
Sbjct: 317 GHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRN 350
>At1g45160.1 68414.m05177 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 1067
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/71 (22%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Frame = +3
Query: 150 EIPGHDLIFLSRQNSHRVEADQRRKQLRYTSKAFIGHSHFIS-DVVLSSDGNYALSGSWD 326
++ GH+ R NSH + +Q +++R+++ +G +++ +++L ++ YA + W
Sbjct: 825 DLSGHESDVSPRTNSHHFQKNQEEERIRHSA---VGTPDYLAPEILLGTEHGYA-ADWWS 880
Query: 327 KTLRLWDLAAG 359
+ L++L G
Sbjct: 881 AGIVLFELLTG 891
>At1g17720.2 68414.m02194 serine/threonine protein phosphatase 2A
(PP2A) 55 kDa regulatory subunit B identical to type 2A
protein serine/threonine phosphatase 55 kDa B regulatory
subunit (GI:1408460) [Arabidopsis thaliana]; similar to
55 kDa B regulatory subunit of phosphatase 2A GI:710330;
contains Pfam PF00400: WD domain, G-beta repeat (5
copies, 3 weak)
Length = 500
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 270 ISDVVLSSDGNYALSGSWDKTLRLWDL 350
ISD+ S DG Y LS + TL+LWD+
Sbjct: 332 ISDIKFSKDGRYILSRDY-MTLKLWDI 357
>At1g17720.1 68414.m02193 serine/threonine protein phosphatase 2A
(PP2A) 55 kDa regulatory subunit B identical to type 2A
protein serine/threonine phosphatase 55 kDa B regulatory
subunit (GI:1408460) [Arabidopsis thaliana]; similar to
55 kDa B regulatory subunit of phosphatase 2A GI:710330;
contains Pfam PF00400: WD domain, G-beta repeat (5
copies, 3 weak)
Length = 501
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 270 ISDVVLSSDGNYALSGSWDKTLRLWDL 350
ISD+ S DG Y LS + TL+LWD+
Sbjct: 333 ISDIKFSKDGRYILSRDY-MTLKLWDI 358
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 288 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 413
S DG Y L+G D +++W + K E H V VAF
Sbjct: 354 SMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 395
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/75 (24%), Positives = 35/75 (46%)
Frame = +2
Query: 524 VSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 703
++ + FS + A+ + + G D ++++ KL + G L + S DG +G
Sbjct: 306 INSIAFSNDGAH--LATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKYILTG 363
Query: 704 GKDMKAMLWDLNDGK 748
G+D +W + D K
Sbjct: 364 GEDDLVQVWSMEDRK 378
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/69 (24%), Positives = 30/69 (43%)
Frame = +2
Query: 650 GYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLTTMISSLPCASQPTDTGYVLLS 829
G +N++ S DG+ A+ G+D ++D K + + +L C S D Y+L
Sbjct: 304 GSINSIAFSNDGAHLATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKYILTG 363
Query: 830 DLPSRSGIW 856
+W
Sbjct: 364 GEDDLVQVW 372
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/59 (22%), Positives = 26/59 (44%)
Frame = +3
Query: 294 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 470
D N G D ++ ++++ + + + H K + +AFS +VS D + W
Sbjct: 884 DNNIIAIGMEDSSIHIYNVRVDEVKTKLKGHQKHITGLAFSTALNILVSSGADAQLFFW 942
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 512 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKL 625
H V+ + F+ + +V+CG D+ +KVW L+ KL
Sbjct: 452 HVGCVNDLAFAHPNKQMCVVTCGDDKLIKVWDLSGKKL 489
>At2g26700.1 68415.m03203 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 525
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/56 (21%), Positives = 33/56 (58%)
Frame = +3
Query: 240 SKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSV 407
SK+F+G +++ V+S G+ + W + L+++ G+T + +++ K ++++
Sbjct: 355 SKSFVGTHEYLAPEVISGQGHGSAVDWWTYGIFLYEMIFGRTPFKGDNNEKTLVNI 410
>At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to Lipopolysaccharide-responsive and beige-like anchor
protein (CDC4-like protein) (Beige-like protein)
(SP:P50851) [Homo sapiens}
Length = 1280
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +3
Query: 258 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR 374
H +S V +++D +GS+D T+ +WD+ +T +
Sbjct: 1045 HKDVVSCVAVTADSTILATGSYDTTVMVWDILRMRTPEK 1083
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +3
Query: 240 SKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS-VAFS 416
S GH I+ + +S+D + +SGS D T L G+ R + + +S +A S
Sbjct: 1104 SHILCGHDDIITCLYVSTDLDIVISGSKDGTCVFHTLREGRYIRSLKHPSGSAVSKLAAS 1163
Query: 417 VDNRQIVSGSRDKTIKLWN 473
R ++ G D ++ L++
Sbjct: 1164 HHGRIVLYGDDDLSLHLYS 1182
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 656 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLT 766
+N ++SPDG L G + +++L D N GK L TL+
Sbjct: 278 VNHTSLSPDGKLLTIVGDNPESLLVDPNTGKTLATLS 314
Score = 27.9 bits (59), Expect = 9.4
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +3
Query: 270 ISDVVLSSDGNY-ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 446
++ LS DG + G ++L L D GKT H + A+ D +G+
Sbjct: 278 VNHTSLSPDGKLLTIVGDNPESL-LVDPNTGKTLATLSGHLDFSFASAWHPDGFTFSTGN 336
Query: 447 RDKTIKLWN 473
+DKT ++W+
Sbjct: 337 QDKTCRVWD 345
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 258 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTT 368
H ++ + ++DG Y LS +RLWD+ +G+ T
Sbjct: 311 HYGVVTGLKATNDGMYLLSAGSYSRIRLWDIESGRNT 347
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/49 (22%), Positives = 29/49 (59%)
Frame = +3
Query: 327 KTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
KT++ + + +G+TT H + V + F+ +++++ + D+ I +W+
Sbjct: 379 KTVKGFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGADRQIIVWS 427
>At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related
similar to BEIGE (GI:3928547) [Rattus norvegicus];
Similar to gb|U70015 lysosomal trafficking regulator from
Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta
repeats. ESTs gb|T43386 and gb|AA395236 come from this
gene
Length = 3601
Score = 30.7 bits (66), Expect = 1.3
Identities = 23/98 (23%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Frame = +3
Query: 198 RVEADQRRKQLRYT-SKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR 374
RV D R R KA H+ ++ + +S SGS D T+ +WDL++ R+
Sbjct: 3358 RVSKDGPRGSRRLRLEKALCAHTAKVTCLRVSQPYMMIASGSDDCTVIIWDLSSLSFVRQ 3417
Query: 375 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 488
D + ++ + +IV+ + + +W+ +C
Sbjct: 3418 LPDFPVPISAIYINDLTGEIVTAA-GTVLAVWSINGDC 3454
Score = 27.9 bits (59), Expect = 9.4
Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 8/89 (8%)
Frame = +2
Query: 497 HPR*GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTN--------CKLKINHLGHSG 652
H S+ + C S H I+V+ D V VW ++ +L+ H+
Sbjct: 3324 HENLHESNQIQCAGVS--HDGRIVVTGAEDGLVCVWRVSKDGPRGSRRLRLEKALCAHTA 3381
Query: 653 YLNTVTVSPDGSLCASGGKDMKAMLWDLN 739
+ + VS + ASG D ++WDL+
Sbjct: 3382 KVTCLRVSQPYMMIASGSDDCTVIIWDLS 3410
>At5g12920.1 68418.m01482 expressed protein contains 3 weak WD-40
repeats (PF00400); low similarity to MEK kinase alpha
(GI:4028547); transcriptional repressor TUP1
(GI:3406654) [Dictyostelium discoideum]; Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (TGF-beta receptor interacting protein 1)
(TRIP-1) (SP:Q38884) [Arabidopsis thaliana]
Length = 442
Score = 30.3 bits (65), Expect = 1.8
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 6/110 (5%)
Frame = +3
Query: 162 HD--LIF-LSRQNSHRVEADQRRKQLRYTSKAFIGHSHFISDVVLSSDGNYAL-SGSWDK 329
HD LIF +S + E Q R++L + S +SDV ++SD + + S
Sbjct: 117 HDQVLIFDISYMSPKPTEVLQTRQKLSIIGRKI---SRGLSDVAITSDEDSRIFSPDTLG 173
Query: 330 TLRLWDLAAGKTT--RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
+ +WD AG + D + S+ VDN+ I ++ I +W+
Sbjct: 174 MVHVWDRRAGVSPCIELSTDRYDSIKSIQIYVDNQTIFGAGKEGIIHIWD 223
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +3
Query: 270 ISDVVLSSDGN-YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 446
+S + S G+ Y SG + +++WDL ++ + HT + V ++ + + S S
Sbjct: 95 LSAISFSKKGSRYICSGGTGQIVKIWDLQRKLCIKKLKGHTSTITGVMYNCKDEHLASVS 154
Score = 29.9 bits (64), Expect = 2.3
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Frame = +2
Query: 476 PCGVQVYHPR*GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKL-KINHLGHSG 652
PC V Y P G + V+ V++ NH N ++ S G D+ + +W L + G G
Sbjct: 33 PC-VLSYTPSPGCA--VNSVKW--NHTNLVVASTGEDKKISLWRKNGQSLGTVPVTGKDG 87
Query: 653 ------YLNTVTVSPDGS-LCASGGKDMKAMLWDL 736
L+ ++ S GS SGG +WDL
Sbjct: 88 GDSAEECLSAISFSKKGSRYICSGGTGQIVKIWDL 122
>At2g25420.1 68415.m03045 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (3 repeats)
Length = 717
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +3
Query: 297 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 476
G+ G D ++ + L++ K + E H + + +AFS +VS D + LW+T
Sbjct: 481 GDLLAVGLDDGSIFIHCLSSRKVKEKLEGHDQKITCLAFSRCFNVLVSSDSDGKLCLWST 540
Query: 477 LAECKYT 497
+ K T
Sbjct: 541 KSWVKLT 547
>At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4
WD-40 repeats (PF00400);low similarity to
photomorphogenesis repressor (COP1) GI:2702280
[Arabidopsis thaliana] and COP1 GI:11127996 [Ipomoea
nil]
Length = 343
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Frame = +3
Query: 300 NYALSGSWDKTLRLWDLAAGKTTRR-FED---HTKDVLSVAFSV-DNRQIVSGSRDKTIK 464
N +GS D WD+ R F++ HT V ++ + D I +GS D+T++
Sbjct: 177 NLVYTGSDDCKFSCWDIRDSPADNRVFQNSKVHTMGVCCISSNPSDPYSIFTGSYDETLR 236
Query: 465 LWNT 476
+W+T
Sbjct: 237 VWDT 240
>At4g34020.1 68417.m04827 DJ-1 family protein similar to CAP1
[Rattus norvegicus] GI:3250916, ThiJ protein,
Escherichia coli, PIR:H64771; contains Pfam profile
PF01965 ThiJ/PfpI family
Length = 472
Score = 29.9 bits (64), Expect = 2.3
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Frame = +3
Query: 399 LSVAFSVDNRQIVSGS-----RDKTIKLWNTLAECKYTIQDEDTAIGCHVSDSHPIMP-- 557
++VA S + +VS S RD+T+KL ++++ T D D +G + ++P
Sbjct: 32 MTVAPSFSSVSVVSSSLGTTRRDRTLKLRSSMSPGMVTTLDSDVGVGSSATTKKVLVPIG 91
Query: 558 --TPLLYPVVGTE-LSRSGISLTVSS 626
T + VV + L R+G +TV+S
Sbjct: 92 YGTEEIEAVVLVDVLRRAGADVTVAS 117
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +3
Query: 279 VVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 416
+ +S DG Y +G L ++DL + T + H ++ S++FS
Sbjct: 391 LAVSEDGKYLAAGDCGGNLHIYDLQESEYTCFMDAHEAEIQSLSFS 436
>At2g46560.1 68415.m05808 transducin family protein / WD-40 repeat
family protein similar to CPY (GI:3096961) {Chironomus
thummi}; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies, 3 weak)|9780477|gb|BE522499.1|BE522499
Length = 2471
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +2
Query: 644 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLH 757
H G + + P SL +G KD + LWD K +H
Sbjct: 2374 HLGSVTKIATIPRTSLFLTGSKDGEVKLWDAKAAKLIH 2411
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = +3
Query: 285 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 464
LS DG D L D + G+T + H + A+ + +G++DKT +
Sbjct: 285 LSPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCR 344
Query: 465 LWNT 476
+W+T
Sbjct: 345 IWDT 348
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 656 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 763
+N ++SPDG L A G D +L D ++G+ + TL
Sbjct: 280 VNHSSLSPDGKLVAVVGDDPDGLLVDTSNGQTIGTL 315
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = +3
Query: 285 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 464
LS DG D L D + G+T + H + A+ + +G++DKT +
Sbjct: 279 LSPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCR 338
Query: 465 LWNT 476
+W+T
Sbjct: 339 IWDT 342
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 656 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 763
+N ++SPDG L A G D +L D ++G+ + TL
Sbjct: 274 VNHSSLSPDGKLVAVVGDDPDGLLVDTSNGQTIGTL 309
>At5g04560.1 68418.m00456 DEMETER protein (DME) identical to DEMETER
protein [Arabidopsis thaliana] GI:21743571; contains
Pfam profile PF00730: HhH-GPD superfamily base excision
DNA repair protein
Length = 1729
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +3
Query: 324 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 461
D+T R+W+L GK + D KD + + R++ G D I
Sbjct: 702 DETTRIWNLLMGKGDEKEGDEEKDKKKEKWWEEERRVFRGRADSFI 747
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR-FEDHTKDVLSVAFSVDNRQ 431
GH I +V S DG+ +S S D++ R+W++ + + H+ V S +
Sbjct: 233 GHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCIS--DSL 290
Query: 432 IVSGSRDKTIKLW 470
IV+ D T ++W
Sbjct: 291 IVTAGEDCTCRVW 303
Score = 27.9 bits (59), Expect = 9.4
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +3
Query: 372 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 470
R H + + +S+D +IVS S D++ ++W
Sbjct: 230 RLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIW 262
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +3
Query: 255 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR-FEDHTKDVLSVAFSVDNRQ 431
GH I +V S DG+ +S S D++ R+W++ + + H+ V S +
Sbjct: 233 GHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCIS--DSL 290
Query: 432 IVSGSRDKTIKLW 470
IV+ D T ++W
Sbjct: 291 IVTAGEDCTCRVW 303
Score = 27.9 bits (59), Expect = 9.4
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +3
Query: 372 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 470
R H + + +S+D +IVS S D++ ++W
Sbjct: 230 RLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIW 262
>At2g36350.1 68415.m04461 protein kinase, putative similar to
protein kinase KIPK (KCBP-interacting protein kinase)
[Arabidopsis thaliana] gi|7716430|gb|AAF68383
Length = 949
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/58 (22%), Positives = 31/58 (53%)
Frame = +3
Query: 240 SKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 413
S +F+G +++ ++ +G+ A W + L++L GKT + D+ + + +V +
Sbjct: 795 SNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVLLYELLYGKTPFKGYDNEETLSNVVY 852
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +1
Query: 55 LFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 210
L+ P S S + L H G V + N K P+ + S + D T+ +W L
Sbjct: 94 LWNPISSESGEIAHVRDLSKHKGPVRGLEFNVKSPNQLASGADDGTVCIWDL 145
>At4g04570.1 68417.m00670 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 654
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/53 (20%), Positives = 27/53 (50%)
Frame = -2
Query: 421 STEKATESTSLVWSSNRLVVLPAARSHKRKVLSQEPESA*LPSLDSTTSEMKC 263
ST++ T S+ ++W + +++P ++ + + ES + D +E+ C
Sbjct: 601 STKRPTMSSVIIWLGSETIIIPLPKAPAFTWIRSQSESGAMSLSDDVFTELSC 653
>At2g18810.1 68415.m02189 hypothetical protein contains Pfam profile
PF03754: Domain of unknown function (DUF313)
Length = 234
Score = 29.1 bits (62), Expect = 4.1
Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Frame = +3
Query: 285 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 464
++S NY L W+K + L G R + H+ D+L A + + + + +
Sbjct: 139 MTSTSNYVLGSGWNKVVTENILETGTRLRLWSFHSPDMLFFALVLSDPDLAPTKDWECLN 198
Query: 465 LWNTL---AECKYTIQDEDTAIGCHVSDS 542
L L C QD DT + VSD+
Sbjct: 199 LLAKLTVETACLEASQDADT-MSSLVSDT 226
>At1g69400.2 68414.m07968 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 272
Score = 29.1 bits (62), Expect = 4.1
Identities = 22/81 (27%), Positives = 34/81 (41%)
Frame = +3
Query: 270 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 449
+S + S N L SWD LRL+D+ + + +L F ++ SGS
Sbjct: 16 VSRLRFSPQSNNLLVASWDSYLRLYDVESSSLSLELNSQAA-LLDCCFENESTSFTSGS- 73
Query: 450 DKTIKLWNTLAECKYTIQDED 512
D I+ ++ A TI D
Sbjct: 74 DGFIRRYDLNAGTVDTIGRHD 94
>At1g69400.1 68414.m07969 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 314
Score = 29.1 bits (62), Expect = 4.1
Identities = 22/81 (27%), Positives = 34/81 (41%)
Frame = +3
Query: 270 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 449
+S + S N L SWD LRL+D+ + + +L F ++ SGS
Sbjct: 16 VSRLRFSPQSNNLLVASWDSYLRLYDVESSSLSLELNSQAA-LLDCCFENESTSFTSGS- 73
Query: 450 DKTIKLWNTLAECKYTIQDED 512
D I+ ++ A TI D
Sbjct: 74 DGFIRRYDLNAGTVDTIGRHD 94
>At1g65030.1 68414.m07371 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to PAK/PLC-interacting protein 1 (GI:14211689)
[Homo sapiens]
Length = 345
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
Frame = +3
Query: 240 SKAFIGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED--HTKDVLSVAF 413
S F SH ++ G A SG D T+ L+DL + + D H + +++F
Sbjct: 32 SPLFSYPSHISPITTVACSGPAAASGGSDDTIHLYDLPSASSLGSLLDHNHAASITALSF 91
Query: 414 SVDN-----RQIVSGSRDKTIKLWNT 476
+ R ++S + D ++ +++T
Sbjct: 92 YTPSSLSFPRNLISAAADGSVAIFDT 117
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 656 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 763
+N +VSPDG L A G + ++ D + GK + +L
Sbjct: 251 VNNTSVSPDGKLLAVVGDSTECLISDSHSGKVISSL 286
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 641 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 742
GH Y P+G + A+G +D LWD+ +
Sbjct: 288 GHKDYSFASAWHPNGLILATGNQDTACRLWDIRN 321
>At5g14050.1 68418.m01644 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to unknown protein (ref|NP_057085.1)
Length = 546
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +3
Query: 396 VLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDEDTAIGCHVSDS 542
V S+AFS D + ++S D + +W+ +C Y DE + G + S
Sbjct: 377 VRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCLYKGVDEGSTCGTSLCSS 426
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +2
Query: 611 TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLH 757
T K I L +G + ++ S DG S G D + +WDL K L+
Sbjct: 362 TKTKELIGTLKMNGSVRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCLY 410
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +1
Query: 79 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT 213
S L+L +L H V + + Y MI SSS D T+I+W L+
Sbjct: 3311 SRRLRLEKSLCAHTAKVICLRVSQPYM-MIASSSDDCTVIIWDLS 3354
>At3g26480.1 68416.m03301 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (5 copies, 2 below cutoff); related to
LACK protective antigen (GI:13625467) [Leishmania
donovani]
Length = 764
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 644 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGK 748
HS + + S DG+L SG K ++W+L GK
Sbjct: 245 HSAEVTVLNFSSDGALLYSGVKAGDFVVWELGTGK 279
>At3g22620.1 68416.m02856 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to pEARLI
1 (Accession No. L43080): an Arabidopsis member of a
conserved gene family (PGF95-099), Plant Physiol. 109
(4), 1497 (1995); contains Pfam protease inhibitor/seed
storage/LTP family domain PF00234
Length = 203
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 409 PSQLTTVR*CLVLATRLSNSGTPLRSASIPS--KMRTQRLGVMCQILT 546
PS +TTV C+ T S++GT S S + T +G +C I+T
Sbjct: 31 PSMMTTVSPCMGFITNSSSNGTSPSSDCCNSLRSLTTGGMGCLCLIVT 78
>At3g13290.1 68416.m01673 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1322
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +1
Query: 94 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRL 252
LR RGH+ VT +A + ++ S S D + VWK++ E + G Q ++
Sbjct: 213 LRSLFRGHSQRVTDMAFFAEDVHLLASVSLDGKVFVWKIS--EGSEGDEQSQI 263
>At5g13850.1 68418.m01619 nascent polypeptide-associated complex
(NAC) domain-containing protein similar to alpha-NAC,
non-muscle form [Mus musculus] GI:1666690; contains Pfam
profile PF01849: NAC domain
Length = 159
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 735 RSHNIAFMSLPPDAHKEPSGDTVTVF 658
+S NI F+ PD K P+ DT +F
Sbjct: 84 KSKNILFVISKPDVFKSPASDTYVIF 109
>At3g12390.1 68416.m01544 nascent polypeptide associated complex
alpha chain protein, putative / alpha-NAC, putative
similar to alpha-NAC, non-muscle form [Mus musculus]
GI:1666690; contains Pfam profiles PF01849: NAC domain,
PF00627: UBA/TS-N domain
Length = 203
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 735 RSHNIAFMSLPPDAHKEPSGDTVTVF 658
+S NI F+ PD K P+ DT +F
Sbjct: 88 KSKNILFVISKPDVFKSPASDTYVIF 113
>At1g27470.1 68414.m03349 transducin-related / WD-40 repeat
protein-related contains 6 WD-40 repeats (PF00400) (2
weak); related to KIAA1988 protein (GI:18916910) [Homo
sapiens]
Length = 810
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 387 TKDVLSVAFSVDNRQIVSGSRDKTIKLWN 473
T LSV +S D ++I SGS D I+ W+
Sbjct: 198 TGRALSVTWSADAQRIFSGSSDGLIRCWD 226
>At5g01290.1 68418.m00039 mRNA capping enzyme family protein similar
to mRNA capping enzyme [Xenopus laevis] GI:7239232;
contains Pfam profiles PF01331: mRNA capping enzyme
catalytic domain, PF03919: mRNA capping enzyme
C-terminal domain
Length = 607
Score = 27.9 bits (59), Expect = 9.4
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 545 PNHANPIIVSCGWDRTVKVW 604
P+ N IV C WD+ KVW
Sbjct: 527 PSSYNGKIVECAWDKDKKVW 546
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +1
Query: 55 LFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDE 222
L KP S+ S L+G+ G ++ I+ N K ++ S+S + T ++W L + +
Sbjct: 152 LLKP-SEPSHFPLLKGSGSATQGEISFISWNRKVQQILASTSYNGTTVIWDLRKQK 206
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +1
Query: 55 LFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDE 222
L KP S+ S L+G+ G ++ I+ N K ++ S+S + T ++W L + +
Sbjct: 152 LLKP-SEPSHFPLLKGSGSATQGEISFISWNRKVQQILASTSYNGTTVIWDLRKQK 206
>At2g16490.1 68415.m01891 XH domain-containing protein contains Pfam
PF03469: XH domain
Length = 179
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -3
Query: 780 DDIIVVKVWRCLPSFRSHNIAFMSLPPDAH---KEPSGDTVTVF 658
D+I+ +K+W LPSF H + H KEP + + VF
Sbjct: 21 DNILKMKLWLKLPSFALHRRRISRIHHGIHSNIKEPRTNQICVF 64
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,245,152
Number of Sequences: 28952
Number of extensions: 487847
Number of successful extensions: 3066
Number of sequences better than 10.0: 239
Number of HSP's better than 10.0 without gapping: 1526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2857
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2048424000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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