Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10585
         (780 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    26   0.39 
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    23   3.6  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   6.3  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    22   6.3  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   6.3  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   6.3  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 25.8 bits (54), Expect = 0.39
 Identities = 9/28 (32%), Positives = 19/28 (67%)
 Frame = -2

Query: 176 LSLIFKIDSALLFLTFPVSLLMIFQVIL 93
           L  +F + S L+F  FP+++L+I  +++
Sbjct: 233 LPCVFFLGSILIFFIFPLAILIIVYILI 260


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 14/51 (27%), Positives = 25/51 (49%)
 Frame = +2

Query: 581 LPTLSKIFEKIILEQLLNHFYSNNLLHNKQYGFTRGRSTIDAGVDLIKNIF 733
           + +LS++     L+     F+++  L    YG   G  T+  G + IKNI+
Sbjct: 76  ISSLSEVKMDFTLDFYFRQFWTDPRL---AYGKRPGVETLSVGSEFIKNIW 123


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 261 KLRFCSRSWDISKVALKSTGHFLM 190
           KLRF +R   I K ++   G FL+
Sbjct: 195 KLRFTTRKETIYKQSIVDMGEFLL 218


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -1

Query: 582 STEMGLKLVGSKVLPDLNRGIILL 511
           +T + LKL+ S +LPD+   + +L
Sbjct: 321 TTNLVLKLLTSPLLPDIKEQVEIL 344


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 130 NVRNSNAESILKIND 174
           N++N N  SIL+ ND
Sbjct: 574 NIKNFNIPSILQFND 588


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 261 KLRFCSRSWDISKVALKSTGHFLM 190
           KLRF +R   I K ++   G FL+
Sbjct: 195 KLRFTTRKETIYKQSIVDMGEFLL 218


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,728
Number of Sequences: 336
Number of extensions: 3732
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21065107
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)