Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10585
         (780 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0659 + 19647037-19647464,19647569-19647659,19648998-196490...    31   0.78 
04_04_0137 - 23053148-23053798,23053911-23054146,23054268-230544...    30   2.4  
06_02_0297 - 13891954-13892556,13893019-13893855,13894179-138943...    29   4.1  
01_05_0762 + 24990915-24990970,24991076-24991592,24991676-249917...    29   5.5  
04_04_1504 + 34035109-34035198,34035586-34036002,34038385-34039017     28   7.2  

>10_08_0659 +
           19647037-19647464,19647569-19647659,19648998-19649039,
           19649179-19649237,19649559-19649634,19649735-19649866,
           19650251-19650358,19651040-19651094,19651187-19651437
          Length = 413

 Score = 31.5 bits (68), Expect = 0.78
 Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
 Frame = +2

Query: 521 IPLFKSGSTF---DPTNFRPISVLPTLSKIFEKIILEQLLNHFYSNNLLHNKQYGFTRGR 691
           +P  K G +    D T   P+ +LP L+ +   + +E  L      N +  K   F+RG 
Sbjct: 240 VPSMKGGGSLWFTDLTTPDPLYILPVLTALIFLVTVELNLQEGMEGNPMARKMKNFSRGM 299

Query: 692 S--TIDAGVDLIKNIFQAWEESH 754
           +  T+   +   K IF  W  S+
Sbjct: 300 AVLTVPFTMSFAKGIFCYWITSN 322


>04_04_0137 -
           23053148-23053798,23053911-23054146,23054268-23054458,
           23054587-23056010
          Length = 833

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 17/54 (31%), Positives = 28/54 (51%)
 Frame = +1

Query: 46  KSLHLGKLIKNAPDKIKMTWNIINRETGNVRNSNAESILKINDKIITSHQEVAS 207
           K LH  K ++ AP++ +M W+ I   +  +     ES+   N +  T H+EV S
Sbjct: 449 KPLHWDK-VRAAPNR-RMVWDRIRSSSFELDEKMIESLFGYNARCSTKHEEVQS 500


>06_02_0297 -
           13891954-13892556,13893019-13893855,13894179-13894394,
           13895455-13895874,13896198-13896506
          Length = 794

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = +2

Query: 512 SKIIPLFKSGSTFDPTN-FRPISVLPTLSKIFEKIILEQLLNHFYSNNLLHNKQYGFTRG 688
           S  I L    ++ +  N FRPIS++    KI  K++  +L        L+ +  YGF +G
Sbjct: 370 SSFITLVPKKTSLETVNDFRPISLMGISLKIVTKLLAGRLQGVIL--KLVSDNHYGFIKG 427

Query: 689 RSTID 703
           ++  D
Sbjct: 428 KTIQD 432


>01_05_0762 +
           24990915-24990970,24991076-24991592,24991676-24991753,
           24993678-24993743,24994819-24994943,24995414-24995612,
           24995909-24996137,24996259-24996425,24996526-24996735,
           24997245-24997355,24997436-24997612,24997826-24998284,
           24998676-24998966
          Length = 894

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +3

Query: 240 FYYKILISSPTVAESLLQDHVDECSVNFKFTNIAIKD-IIDNFKTINI 380
           FYY++L   P VAE ++       SV     +  IKD I D F ++++
Sbjct: 594 FYYRLLQYDPAVAERVVNPPKQAVSVFADTQSSEIKDRIFDEFNSLSV 641


>04_04_1504 + 34035109-34035198,34035586-34036002,34038385-34039017
          Length = 379

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +1

Query: 166 INDKIITSHQEVASAFERYFADIPASTTKS*FHLLP 273
           + DK   S  +    F  YF+D+P++   + FHLLP
Sbjct: 85  MTDKSFGSKDDDGLEFCFYFSDLPSNDFNTLFHLLP 120


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,787,402
Number of Sequences: 37544
Number of extensions: 327309
Number of successful extensions: 714
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 714
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2091906552
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)