Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10585
(780 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 58 2e-10
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 48 4e-07
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 47 8e-07
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 47 8e-07
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 46 1e-06
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 46 1e-06
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 46 1e-06
AJ970245-1|CAI96717.1| 134|Anopheles gambiae putative reverse t... 46 1e-06
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 43 9e-06
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 43 9e-06
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 43 1e-05
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 43 1e-05
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 42 2e-05
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 42 3e-05
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 41 5e-05
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 40 1e-04
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 39 2e-04
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript... 38 5e-04
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 38 5e-04
AJ970243-1|CAI96715.1| 129|Anopheles gambiae putative reverse t... 34 0.006
AJ970251-1|CAI96723.1| 131|Anopheles gambiae putative reverse t... 32 0.017
AJ970250-1|CAI96722.1| 132|Anopheles gambiae putative reverse t... 27 0.65
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p... 24 6.1
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 23 8.0
AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical prot... 23 8.0
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 58.4 bits (135), Expect = 2e-10
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Frame = +2
Query: 515 KIIPLFKSGST-FDPTNFRPISVLPTLSKIFEKIILEQLLNHFYSNNLLHNKQYGFTRGR 691
+++ L KSG +P+++RPI +L L KI E++I +L H S L + QYGF +GR
Sbjct: 473 QLVLLTKSGKPPGEPSSYRPICLLSVLGKILERLIQRRLTTHLESTGGLSDPQYGFRKGR 532
Query: 692 STIDAGVDLIKN 727
ST+DA ++ N
Sbjct: 533 STVDAITRVMNN 544
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 47.6 bits (108), Expect = 4e-07
Identities = 22/74 (29%), Positives = 44/74 (59%)
Frame = +2
Query: 554 PTNFRPISVLPTLSKIFEKIILEQLLNHFYSNNLLHNKQYGFTRGRSTIDAGVDLIKNIF 733
P+ FRP+ ++ L+K+ E +IL++L + + L ++Q+GF + RST+DA + +++
Sbjct: 528 PSAFRPLGLVDNLAKVQEMVILDRLTKYTEGPHGLSDRQFGFRKKRSTVDAILAVLEKGI 587
Query: 734 QAWEESHNALGYSA 775
A++ Y A
Sbjct: 588 AAFQRKRCGARYCA 601
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 46.8 bits (106), Expect = 8e-07
Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Frame = +2
Query: 551 DPTNFRPISVLPTLSKIFEKIILEQLLNHF--YSNNLLHNKQYGFTRGRSTI 700
DP++FRPI +L K FE+++L++L H N L QYGF GRST+
Sbjct: 490 DPSSFRPICLLNNAGKTFERLLLDRLNEHLEDSDNPQLSEYQYGFRLGRSTL 541
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 46.8 bits (106), Expect = 8e-07
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Frame = +2
Query: 515 KIIPLFKSGST-FDPTNFRPISVLPTLSKIFEKIILEQLLNHFYSNNL--LHNKQYGFTR 685
+++ L K+G + +++RP+S+L L K+ E++IL +L H + L + QYGF R
Sbjct: 487 RLVLLSKTGKPPGESSSYRPLSMLDALGKVLEQLILNRLNKHLEDPDSPRLSDAQYGFRR 546
Query: 686 GRSTIDA 706
GRST A
Sbjct: 547 GRSTFSA 553
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 46.4 bits (105), Expect = 1e-06
Identities = 21/54 (38%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +2
Query: 551 DPTNFRPISVLPTLSKIFEKIILEQLLNHFY--SNNLLHNKQYGFTRGRSTIDA 706
+ +++RP+ +L L K+ E++IL +L H S+ L ++Q+GF RGRST+ A
Sbjct: 546 ESSSYRPLCMLDALGKVLERLILNRLNEHLEEPSSPRLSDRQFGFRRGRSTVSA 599
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 46.4 bits (105), Expect = 1e-06
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Frame = +2
Query: 560 NFRPISVLPTLSKIFEKIILEQLLNHFYSNNL--LHNKQYGFTRGRSTIDA 706
++RP+ +L L K+ EK+IL +L NH L ++Q+GF RGRSTI A
Sbjct: 556 SYRPLCMLDALGKVLEKLILNRLHNHLEDPAAVRLSDRQHGFRRGRSTIGA 606
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 46.4 bits (105), Expect = 1e-06
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Frame = +2
Query: 551 DPTNFRPISVLPTLSKIFEKIILEQLLNHFYSNNL--LHNKQYGFTRGRSTIDA 706
+ +++RP+ +L L K+ E++IL +L H + L + QYGF RGRSTI A
Sbjct: 561 ESSSYRPLCMLDALGKVLERLILNRLNRHIEQQDSPQLSDAQYGFRRGRSTISA 614
>AJ970245-1|CAI96717.1| 134|Anopheles gambiae putative reverse
transcriptase protein.
Length = 134
Score = 46.0 bits (104), Expect = 1e-06
Identities = 19/46 (41%), Positives = 31/46 (67%)
Frame = +2
Query: 560 NFRPISVLPTLSKIFEKIILEQLLNHFYSNNLLHNKQYGFTRGRST 697
++RPIS+L L KIFEK++ ++ H ++NN++ Q+GF ST
Sbjct: 1 SYRPISLLSCLGKIFEKLLESRMALHTFNNNIIPKSQFGFRPSLST 46
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 43.2 bits (97), Expect = 9e-06
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Frame = +2
Query: 515 KIIPLFKSG-STFDPTNFRPISVLPTLSKIFEKIILEQLLNHFYS--NNLLHNKQYGFTR 685
+++ L K G S +P++FRPI +L K E+++L +L + + L +Q+GF R
Sbjct: 482 RLVLLPKPGKSPGEPSSFRPICLLDNTGKALERLLLNRLNEYIEDPESPQLSEQQFGFRR 541
Query: 686 GRSTIDA 706
GRST+ A
Sbjct: 542 GRSTLQA 548
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 43.2 bits (97), Expect = 9e-06
Identities = 23/57 (40%), Positives = 35/57 (61%)
Frame = +2
Query: 551 DPTNFRPISVLPTLSKIFEKIILEQLLNHFYSNNLLHNKQYGFTRGRSTIDAGVDLI 721
+ +++RP+ +L L K+ E++IL + L S L + QYGF RGRSTI A L+
Sbjct: 508 ESSSYRPLCMLDALGKVLERLILNRHLEDPDSPQL-SDAQYGFRRGRSTISAIQSLV 563
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 42.7 bits (96), Expect = 1e-05
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Frame = +2
Query: 551 DPTNFRPISVLPTLSKIFEKIILEQLLNHFYSN---NLLHNKQYGFTRGRSTI 700
+ ++FRP+ +L L K+ E++IL +L N F N + L QYGF RG+ST+
Sbjct: 506 ESSSFRPLGMLNGLGKVLERLILNRL-NEFLENGETSHLSPNQYGFRRGKSTV 557
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 42.7 bits (96), Expect = 1e-05
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +2
Query: 566 RPISVLPTLSKIFEKIILEQLLNHFYSNNLLHNKQYGFTRGRSTIDA 706
RPI ++ ++K E++IL +L NH L QYGF +GR+T DA
Sbjct: 480 RPICLIDGVAKGLERVILHRLNNHIERVQGLSENQYGFRKGRATTDA 526
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 42.3 bits (95), Expect = 2e-05
Identities = 23/71 (32%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Frame = +2
Query: 515 KIIPLFKSGSTFDPTN-FRPISVLPTLSKIFEKIILEQLLNHFYSNNLLHNKQYGFTRGR 691
K++ L K G D + RP++++ +KI E +IL +L+ + + L ++Q+GF +GR
Sbjct: 453 KLVLLPKPGKPPDDASALRPLALIDNFAKILEILILNRLVVYTEGEHGLSDRQFGFRKGR 512
Query: 692 STIDAGVDLIK 724
ST +A ++K
Sbjct: 513 STGEAIAAVLK 523
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 41.5 bits (93), Expect = 3e-05
Identities = 21/52 (40%), Positives = 31/52 (59%)
Frame = +2
Query: 551 DPTNFRPISVLPTLSKIFEKIILEQLLNHFYSNNLLHNKQYGFTRGRSTIDA 706
+P + RPI +L K E+II+++L H N L + Q+GF RST+DA
Sbjct: 470 EPGSVRPICLLDGAGKGLERIIVQRLNAHIEEVNGLSDDQFGFRSRRSTVDA 521
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 40.7 bits (91), Expect = 5e-05
Identities = 22/70 (31%), Positives = 39/70 (55%)
Frame = +2
Query: 512 SKIIPLFKSGSTFDPTNFRPISVLPTLSKIFEKIILEQLLNHFYSNNLLHNKQYGFTRGR 691
S ++P++K G D N+R I+ L ++K+FE +I + LL+ + L Q+GF +
Sbjct: 600 SWMVPIYKKGDRTDAINYRGITSLCAIAKVFELVIYKNLLH--ACRSYLSPYQHGFVPKK 657
Query: 692 STIDAGVDLI 721
ST V+ +
Sbjct: 658 STTTNLVEFV 667
Score = 25.0 bits (52), Expect = 2.6
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3
Query: 444 APYLATIFNDCIYNGVFP 497
AP LA +FN + NG FP
Sbjct: 577 APILAKLFNASLANGYFP 594
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 39.5 bits (88), Expect = 1e-04
Identities = 23/76 (30%), Positives = 40/76 (52%)
Frame = +2
Query: 518 IIPLFKSGSTFDPTNFRPISVLPTLSKIFEKIILEQLLNHFYSNNLLHNKQYGFTRGRST 697
+ P+ K G +N+R I+ +K FE I +L+ ++ + KQ+GF GRST
Sbjct: 531 LFPVHKKGCRSIVSNYRGITQTCATAKTFELCIFPTILHS--CSSAISPKQHGFMPGRST 588
Query: 698 IDAGVDLIKNIFQAWE 745
+ + NIF+++E
Sbjct: 589 STNLMSFVTNIFRSFE 604
Score = 25.4 bits (53), Expect = 2.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 444 APYLATIFNDCIYNGVFPDL 503
AP+LA IFN + GVFP L
Sbjct: 506 APHLAKIFNLSLSLGVFPAL 525
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 38.7 bits (86), Expect = 2e-04
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Frame = +2
Query: 557 TNFRPISVLPTLSKIFEKIILEQL---LNHFYSNNLLHNKQYGFTRGRSTIDA 706
++FRPI +L K++E+++L ++ + S L N QYGF RGRST+ A
Sbjct: 494 SSFRPILLLNNPGKVYERLLLSRINDVIEDPESPRLAEN-QYGFRRGRSTVQA 545
>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
protein.
Length = 1209
Score = 37.5 bits (83), Expect = 5e-04
Identities = 14/48 (29%), Positives = 30/48 (62%)
Frame = +2
Query: 533 KSGSTFDPTNFRPISVLPTLSKIFEKIILEQLLNHFYSNNLLHNKQYG 676
K +T +P +RP++ L L+K+ +I +++ +H +NN++ +Q G
Sbjct: 524 KDQNTKNPAKYRPLTCLSNLNKVLSSVITQKVKDHCDTNNVMTEEQTG 571
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 37.5 bits (83), Expect = 5e-04
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +2
Query: 560 NFRPISVLPTLSKIFEKIILEQLLNHFYS--NNLLHNKQYGFTRGRSTI 700
++RP+ +L L K+ E++IL +L + L ++QYGF RG STI
Sbjct: 489 SYRPLCMLDALGKVLERLILNRLHEFLEDPESPRLSDRQYGFRRGCSTI 537
>AJ970243-1|CAI96715.1| 129|Anopheles gambiae putative reverse
transcriptase protein.
Length = 129
Score = 33.9 bits (74), Expect = 0.006
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +2
Query: 560 NFRPISVLPTLSKIFEKIILEQLLNHFYSNNLLHNKQYGFTRGRSTIDAGVDLIKNIFQA 739
N+R I+ LP+ +K++E +I L+ H S H Q+GF RS V + N A
Sbjct: 1 NYRGITTLPSCAKVYEIVIQNSLMYHCRSYISTH--QHGFFPRRSVTTNLVKFVSNCHAA 58
Query: 740 W 742
+
Sbjct: 59 F 59
>AJ970251-1|CAI96723.1| 131|Anopheles gambiae putative reverse
transcriptase protein.
Length = 131
Score = 32.3 bits (70), Expect = 0.017
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +2
Query: 560 NFRPISVLPTLSKIFEKIILEQLLNHFYSNNLLHNKQYGFTRGRSTIDAGVDLIKNIFQA 739
N+R I+ L +K+FE ++ LLN +L+ +Q+GF RS V+ + + A
Sbjct: 1 NYRGITTLSAGAKVFEVVVQNSLLN--CCRSLISTRQHGFFPRRSVTTNLVEFVSHCHAA 58
Query: 740 W 742
+
Sbjct: 59 F 59
>AJ970250-1|CAI96722.1| 132|Anopheles gambiae putative reverse
transcriptase protein.
Length = 132
Score = 27.1 bits (57), Expect = 0.65
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 560 NFRPISVLPTLSKIFEKIILEQLLNHFYSNNLLHNKQYGFTRGRSTIDAGVDLI 721
N+R I+ ++K+FE +I LL + + L Q+GF +ST V+ +
Sbjct: 1 NYRGITSSCAIAKVFELVIYNNLL--YACRSYLSPYQHGFVPKKSTTTNLVEFV 52
>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
protein.
Length = 1077
Score = 23.8 bits (49), Expect = 6.1
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 518 IIPLFKSGSTFDPTNFRPISVLPTLSKIFEKIILEQL 628
I+ + K G ++ RPIS+L T K+ K+I +L
Sbjct: 504 IVLVRKKGGGDAMSSIRPISLLNTDYKLLSKVIKPRL 540
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 23.4 bits (48), Expect = 8.0
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 262 HLLPSPNHYCKIM 300
HLLPSP C+I+
Sbjct: 224 HLLPSPAEQCRIL 236
>AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical protein
protein.
Length = 765
Score = 23.4 bits (48), Expect = 8.0
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 262 HLLPSPNHYCKIM 300
HLLPSP C+I+
Sbjct: 225 HLLPSPAEQCRIL 237
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 756,773
Number of Sequences: 2352
Number of extensions: 13859
Number of successful extensions: 44
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81497388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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