Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10585
(780 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 42 7e-04
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 42 7e-04
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 42 7e-04
U88184-4|AAK31518.1| 96|Caenorhabditis elegans Hypothetical pr... 30 2.1
U11279-2|AAW88400.1| 714|Caenorhabditis elegans Sensory axon gu... 29 4.9
U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon gu... 29 4.9
AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein. 29 4.9
AY037802-1|AAK94767.1| 669|Caenorhabditis elegans GLY-2 protein. 29 4.9
AY037800-1|AAK94765.1| 661|Caenorhabditis elegans GLY-2 protein. 29 4.9
AF154122-1|AAF74523.1| 669|Caenorhabditis elegans N-acetylgluco... 29 4.9
AC006625-9|AAK68273.1| 669|Caenorhabditis elegans Glycosylation... 29 4.9
Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical pr... 28 8.6
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical
protein F20B4.7 protein.
Length = 891
Score = 41.5 bits (93), Expect = 7e-04
Identities = 24/64 (37%), Positives = 34/64 (53%)
Frame = +2
Query: 512 SKIIPLFKSGSTFDPTNFRPISVLPTLSKIFEKIILEQLLNHFYSNNLLHNKQYGFTRGR 691
SK +FK G + N+RPI +LP L K+F K +L ++ + +Q GF R
Sbjct: 435 SKTTLIFKKGDRENLENYRPICLLPVLYKVFTKCLLNRMRRSL--DEAQPVEQAGFRRSF 492
Query: 692 STID 703
STID
Sbjct: 493 STID 496
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 41.5 bits (93), Expect = 7e-04
Identities = 24/64 (37%), Positives = 34/64 (53%)
Frame = +2
Query: 512 SKIIPLFKSGSTFDPTNFRPISVLPTLSKIFEKIILEQLLNHFYSNNLLHNKQYGFTRGR 691
SK +FK G + N+RPI +LP L K+F K +L ++ + +Q GF R
Sbjct: 606 SKTTLIFKKGDRENLENYRPICLLPVLYKVFTKCLLNRMRRSL--DEAQPVEQAGFRRSF 663
Query: 692 STID 703
STID
Sbjct: 664 STID 667
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 41.5 bits (93), Expect = 7e-04
Identities = 24/64 (37%), Positives = 34/64 (53%)
Frame = +2
Query: 512 SKIIPLFKSGSTFDPTNFRPISVLPTLSKIFEKIILEQLLNHFYSNNLLHNKQYGFTRGR 691
SK +FK G + N+RPI +LP L K+F K +L ++ + +Q GF R
Sbjct: 345 SKTTLIFKKGDRENLENYRPICLLPVLYKVFTKCLLNRMRRSL--DEAQPVEQAGFRRSF 402
Query: 692 STID 703
STID
Sbjct: 403 STID 406
>U88184-4|AAK31518.1| 96|Caenorhabditis elegans Hypothetical
protein F36H5.9 protein.
Length = 96
Score = 29.9 bits (64), Expect = 2.1
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Frame = +2
Query: 500 SNEYSKII----PLFKSG-STFDPTNFRPISVLPTLSKIFEKIILEQLLNHFYSNNLLHN 664
SNE SK++ P+ + G S + + IS L KIF++ I ++ NH + HN
Sbjct: 11 SNELSKVLRHMDPIAQFGLSLLSENSKKLISAL----KIFDRKIYIEVQNHVHVILDTHN 66
Query: 665 KQYGFTRGRSTIDAGVDL 718
+GF G + + G+++
Sbjct: 67 CSFGFNCGTTDRNVGIEI 84
>U11279-2|AAW88400.1| 714|Caenorhabditis elegans Sensory axon
guidance protein 2,isoform b protein.
Length = 714
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/55 (23%), Positives = 28/55 (50%)
Frame = +1
Query: 37 TLAKSLHLGKLIKNAPDKIKMTWNIINRETGNVRNSNAESILKINDKIITSHQEV 201
+L L LGKL+ ++K+ + + + V+NS + ++ I+ H+E+
Sbjct: 509 SLTSELDLGKLLNKLVFQVKLMIDALKDMSDAVKNSTSSQTYSLSPAILEHHREL 563
>U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon
guidance protein 2,isoform a protein.
Length = 2886
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/55 (23%), Positives = 28/55 (50%)
Frame = +1
Query: 37 TLAKSLHLGKLIKNAPDKIKMTWNIINRETGNVRNSNAESILKINDKIITSHQEV 201
+L L LGKL+ ++K+ + + + V+NS + ++ I+ H+E+
Sbjct: 2681 SLTSELDLGKLLNKLVFQVKLMIDALKDMSDAVKNSTSSQTYSLSPAILEHHREL 2735
>AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein.
Length = 2914
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/55 (23%), Positives = 28/55 (50%)
Frame = +1
Query: 37 TLAKSLHLGKLIKNAPDKIKMTWNIINRETGNVRNSNAESILKINDKIITSHQEV 201
+L L LGKL+ ++K+ + + + V+NS + ++ I+ H+E+
Sbjct: 2709 SLTSELDLGKLLNKLVFQVKLMIDALKDMSDAVKNSTSSQTYSLSPAILEHHREL 2763
>AY037802-1|AAK94767.1| 669|Caenorhabditis elegans GLY-2 protein.
Length = 669
Score = 28.7 bits (61), Expect = 4.9
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = -2
Query: 494 KHTIINTVIKYCSKVRCDYINNGFYNLN*YSP*ITSFFNINGLEIINYVLYSNICELKVN 315
K+T+ N V KY S+ C Y+NN L+ I FNI ++L SN C +++
Sbjct: 241 KNTLRNIVWKYMSRGPCQYVNNFRQQLDIIFTDIMG-FNILRQHHRQFLL-SNRCRIRLL 298
Query: 314 TAF 306
+F
Sbjct: 299 DSF 301
>AY037800-1|AAK94765.1| 661|Caenorhabditis elegans GLY-2 protein.
Length = 661
Score = 28.7 bits (61), Expect = 4.9
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = -2
Query: 494 KHTIINTVIKYCSKVRCDYINNGFYNLN*YSP*ITSFFNINGLEIINYVLYSNICELKVN 315
K+T+ N V KY S+ C Y+NN L+ I FNI ++L SN C +++
Sbjct: 233 KNTLRNIVWKYMSRGPCQYVNNFRQQLDIIFTDIMG-FNILRQHHRQFLL-SNRCRIRLL 290
Query: 314 TAF 306
+F
Sbjct: 291 DSF 293
>AF154122-1|AAF74523.1| 669|Caenorhabditis elegans
N-acetylglucosaminyltransferase V protein.
Length = 669
Score = 28.7 bits (61), Expect = 4.9
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = -2
Query: 494 KHTIINTVIKYCSKVRCDYINNGFYNLN*YSP*ITSFFNINGLEIINYVLYSNICELKVN 315
K+T+ N V KY S+ C Y+NN L+ I FNI ++L SN C +++
Sbjct: 241 KNTLRNIVWKYMSRGPCQYVNNFRQQLDIIFTDIMG-FNILRQHHRQFLL-SNRCRIRLL 298
Query: 314 TAF 306
+F
Sbjct: 299 DSF 301
>AC006625-9|AAK68273.1| 669|Caenorhabditis elegans Glycosylation
related protein 2 protein.
Length = 669
Score = 28.7 bits (61), Expect = 4.9
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = -2
Query: 494 KHTIINTVIKYCSKVRCDYINNGFYNLN*YSP*ITSFFNINGLEIINYVLYSNICELKVN 315
K+T+ N V KY S+ C Y+NN L+ I FNI ++L SN C +++
Sbjct: 241 KNTLRNIVWKYMSRGPCQYVNNFRQQLDIIFTDIMG-FNILRQHHRQFLL-SNRCRIRLL 298
Query: 314 TAF 306
+F
Sbjct: 299 DSF 301
>Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical
protein C25F9.2 protein.
Length = 1469
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -3
Query: 757 IMRFLPSLKNIFNKIYTCINSRTASSESILFVMK 656
++RF+ +N FN +NSRT +S ++FV+K
Sbjct: 859 LVRFIKMCQNTFNDWNPLVNSRTLAS-YVMFVLK 891
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,525,998
Number of Sequences: 27780
Number of extensions: 334072
Number of successful extensions: 907
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 907
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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