Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10584
(468 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61353 Cluster: 60S ribosomal protein L27; n=97; Eukary... 144 6e-34
UniRef50_P91914 Cluster: 60S ribosomal protein L27; n=14; Eukary... 134 7e-31
UniRef50_Q16PM4 Cluster: 60S ribosomal protein L27; n=1; Aedes a... 125 4e-28
UniRef50_P0C2H7 Cluster: 60S ribosomal protein L27-B; n=39; Euka... 121 9e-27
UniRef50_Q6R7S0 Cluster: 60S ribosomal protein L27; n=7; Fungi/M... 120 2e-26
UniRef50_Q5CSF1 Cluster: 60S ribosomal protein L27; n=2; Cryptos... 112 3e-24
UniRef50_UPI00006CAB39 Cluster: hypothetical protein TTHERM_0078... 111 6e-24
UniRef50_Q55BE6 Cluster: 60S ribosomal protein L27; n=1; Dictyos... 111 7e-24
UniRef50_Q4WJD7 Cluster: 60S ribosomal protein L27e; n=6; Pezizo... 109 2e-23
UniRef50_A0BCG5 Cluster: Chromosome undetermined scaffold_10, wh... 105 4e-22
UniRef50_Q4N659 Cluster: 60S ribosomal protein L27e, putative; n... 105 6e-22
UniRef50_Q86LP6 Cluster: 60S ribosomal protein L27; n=4; Trypano... 103 1e-21
UniRef50_Q7RNR5 Cluster: 60S ribosomal protein L27 homolog; n=4;... 103 2e-21
UniRef50_Q4Q504 Cluster: 60S ribosomal protein L27; n=6; Trypano... 100 1e-20
UniRef50_Q4P3X4 Cluster: 60S ribosomal protein L27; n=8; Dikarya... 92 5e-18
UniRef50_UPI000049913D Cluster: 60S ribosomal protein L27; n=2; ... 89 6e-17
UniRef50_A2DNC1 Cluster: 60S ribosomal protein L27; n=3; Trichom... 85 6e-16
UniRef50_Q01A00 Cluster: RL27_PEA 60S ribosomal protein L27 pir|... 79 6e-14
UniRef50_UPI0000F2B958 Cluster: PREDICTED: similar to ribosomal ... 75 8e-13
UniRef50_A0C4W1 Cluster: 60S ribosomal protein L27; n=1; Paramec... 69 4e-11
UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia... 69 7e-11
UniRef50_Q98SC5 Cluster: 60S ribosomal protein L27; n=1; Guillar... 65 8e-10
UniRef50_A5I8K6 Cluster: Putative uncharacterized protein; n=1; ... 58 1e-07
UniRef50_Q3LW52 Cluster: Ribosomal protein L27; n=1; Bigelowiell... 39 0.063
UniRef50_Q8SS64 Cluster: 60S RIBOSOMAL PROTEIN L27; n=1; Encepha... 37 0.25
UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2; Eukaryot... 36 0.58
UniRef50_Q0VRK4 Cluster: Putative uncharacterized protein; n=1; ... 35 0.77
UniRef50_Q08W76 Cluster: Hydrogen peroxide-inducible genes activ... 34 1.3
UniRef50_Q02BB6 Cluster: Putative uncharacterized protein; n=1; ... 33 3.1
UniRef50_A7TEU5 Cluster: Putative uncharacterized protein; n=1; ... 33 3.1
UniRef50_Q8PSL5 Cluster: Putative uncharacterized protein; n=1; ... 33 4.1
UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14; Archa... 33 4.1
UniRef50_Q3ELB5 Cluster: Cell surface protein; n=1; Bacillus thu... 32 5.4
UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15; Pezizom... 32 5.4
UniRef50_Q6YTT4 Cluster: Proliferating-cell nucleolar antigen-li... 32 7.2
UniRef50_A2YWD8 Cluster: Putative uncharacterized protein; n=2; ... 32 7.2
UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2; Sordaria... 32 7.2
UniRef50_Q54LS5 Cluster: Putative uncharacterized protein; n=5; ... 31 9.5
UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=1... 31 9.5
UniRef50_O15595 Cluster: 60S ribosomal protein L6; n=5; Entamoeb... 31 9.5
>UniRef50_P61353 Cluster: 60S ribosomal protein L27; n=97;
Eukaryota|Rep: 60S ribosomal protein L27 - Homo sapiens
(Human)
Length = 136
Score = 144 bits (350), Expect = 6e-34
Identities = 66/83 (79%), Positives = 72/83 (86%)
Frame = +3
Query: 6 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 185
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 186 KIHKRSKIKPFVKVVNYNHLMPT 254
KI KRSKIK FVKV NYNHLMPT
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPT 83
Score = 64.1 bits (149), Expect = 1e-09
Identities = 30/52 (57%), Positives = 39/52 (75%), Gaps = 2/52 (3%)
Frame = +2
Query: 257 YTVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 406
Y+VD +K KD+ +DPA ++K R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 85 YSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
>UniRef50_P91914 Cluster: 60S ribosomal protein L27; n=14;
Eukaryota|Rep: 60S ribosomal protein L27 -
Caenorhabditis elegans
Length = 136
Score = 134 bits (325), Expect = 7e-31
Identities = 61/83 (73%), Positives = 70/83 (84%)
Frame = +3
Query: 6 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 185
MGKIMKPGKVVLVL G+YAGRKA+VVK DEG SD+ Y HA +AGIDRYP KV K MGK
Sbjct: 1 MGKIMKPGKVVLVLRGKYAGRKAVVVKQQDEGVSDRTYPHAIIAGIDRYPLKVTKDMGKK 60
Query: 186 KIHKRSKIKPFVKVVNYNHLMPT 254
KI KR+K+KPF+KVV+Y HL+PT
Sbjct: 61 KIEKRNKLKPFLKVVSYTHLLPT 83
Score = 61.3 bits (142), Expect = 1e-08
Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 2/52 (3%)
Frame = +2
Query: 257 YTVDFSFEK--FSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 406
Y+VD +F+K + + LK P+K++K + +FEERYK+GKNKWFF KLRF
Sbjct: 85 YSVDVAFDKTNINKEALKAPSKKRKALVEVKSKFEERYKTGKNKWFFTKLRF 136
>UniRef50_Q16PM4 Cluster: 60S ribosomal protein L27; n=1; Aedes
aegypti|Rep: 60S ribosomal protein L27 - Aedes aegypti
(Yellowfever mosquito)
Length = 98
Score = 125 bits (302), Expect = 4e-28
Identities = 55/73 (75%), Positives = 65/73 (89%)
Frame = +3
Query: 6 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 185
MGKIMK GKVVLVL GRYAGRKAI++K +D+GTSDK +GHA VAGIDRYPR+V +RM K
Sbjct: 1 MGKIMKTGKVVLVLGGRYAGRKAIILKTFDDGTSDKQFGHALVAGIDRYPRRVTRRMNKT 60
Query: 186 KIHKRSKIKPFVK 224
++HKRSKIKPF+K
Sbjct: 61 RLHKRSKIKPFIK 73
>UniRef50_P0C2H7 Cluster: 60S ribosomal protein L27-B; n=39;
Eukaryota|Rep: 60S ribosomal protein L27-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 136
Score = 121 bits (291), Expect = 9e-27
Identities = 51/83 (61%), Positives = 66/83 (79%)
Frame = +3
Query: 6 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 185
M K +K GKV +V+ GRYAG+K ++VK +DEG+ P+GHA VAGI+RYP KV K+ G
Sbjct: 1 MAKFLKAGKVAVVVRGRYAGKKVVIVKPHDEGSKSHPFGHALVAGIERYPSKVTKKHGAK 60
Query: 186 KIHKRSKIKPFVKVVNYNHLMPT 254
K+ KR+KIKPF+KVVNYNHL+PT
Sbjct: 61 KVAKRTKIKPFIKVVNYNHLLPT 83
Score = 46.4 bits (105), Expect = 3e-04
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Frame = +2
Query: 257 YTVDFSFEK--FSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 406
YT+D K S + + P++R++ + + FEER+++GKN+WFF KLRF
Sbjct: 85 YTLDVEAFKSVVSTETFEQPSQREEAKKVVKKAFEERHQAGKNQWFFSKLRF 136
>UniRef50_Q6R7S0 Cluster: 60S ribosomal protein L27; n=7;
Fungi/Metazoa group|Rep: 60S ribosomal protein L27 -
Pectinaria gouldii (Trumpet worm) (Ice-cream cone worm)
Length = 138
Score = 120 bits (288), Expect = 2e-26
Identities = 51/83 (61%), Positives = 65/83 (78%)
Frame = +3
Query: 6 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 185
MGK +KP +V LVL+GR+AG+K +V+K YD GTS++PY HAFV GIDRYPRKV MGK
Sbjct: 1 MGKFVKPDRVALVLNGRHAGKKVVVMKIYDSGTSERPYAHAFVVGIDRYPRKVTATMGKK 60
Query: 186 KIHKRSKIKPFVKVVNYNHLMPT 254
K +R+++K F K +NYNHLM T
Sbjct: 61 KFERRTRVKAFAKFINYNHLMFT 83
Score = 35.1 bits (77), Expect = 0.77
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Frame = +2
Query: 176 GKE*NPQEVQDKAFREGCKL*SLDANSYTVD-FSFEK---FSAKDLKDPAKRKKLRFNTR 343
GK+ + + KAF + L Y+V F +K F K+ + RK+ + +
Sbjct: 58 GKKKFERRTRVKAFAKFINYNHLMFTRYSVQLFPEDKAKTFGPDRWKNFSDRKEFKKELQ 117
Query: 344 VRFEERYKSGKNKWFFQKLRF 406
ER+ + KN+WFF KLRF
Sbjct: 118 TVMRERFLAAKNRWFFTKLRF 138
>UniRef50_Q5CSF1 Cluster: 60S ribosomal protein L27; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L27 -
Cryptosporidium parvum Iowa II
Length = 162
Score = 112 bits (270), Expect = 3e-24
Identities = 46/84 (54%), Positives = 66/84 (78%)
Frame = +3
Query: 3 KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGK 182
KM K+MK G+VV++L+GRYAG+KA+VV ++ GT D+P+ VAG+++ P KVHKR+ K
Sbjct: 17 KMAKLMKQGRVVVLLNGRYAGKKAVVVNTFESGTKDRPFPFVLVAGVEKAPLKVHKRLSK 76
Query: 183 NKIHKRSKIKPFVKVVNYNHLMPT 254
K+ K+S IKPF+K +N NH+MPT
Sbjct: 77 EKLKKKSTIKPFLKSINMNHVMPT 100
>UniRef50_UPI00006CAB39 Cluster: hypothetical protein
TTHERM_00780960; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00780960 - Tetrahymena
thermophila SB210
Length = 128
Score = 111 bits (268), Expect = 6e-24
Identities = 45/82 (54%), Positives = 66/82 (80%)
Frame = +3
Query: 9 GKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNK 188
G+ +K G+VV++L GR+AG+KA++VK+ ++GT D+ +GH VAG++R P+KV KRMG K
Sbjct: 17 GRGLKYGRVVILLQGRFAGKKAVIVKSSEDGTKDRKFGHVLVAGVERSPKKVTKRMGSKK 76
Query: 189 IHKRSKIKPFVKVVNYNHLMPT 254
I KR+ +KPF+K VN NH+MPT
Sbjct: 77 IQKRTSVKPFIKYVNLNHIMPT 98
>UniRef50_Q55BE6 Cluster: 60S ribosomal protein L27; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L27 - Dictyostelium discoideum AX4
Length = 144
Score = 111 bits (267), Expect = 7e-24
Identities = 47/83 (56%), Positives = 66/83 (79%), Gaps = 2/83 (2%)
Frame = +3
Query: 12 KIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDK--PYGHAFVAGIDRYPRKVHKRMGKN 185
K +KPG++V++L+G+YAGRKA+V+K +D+ T+ K PYGH VAGID+YPR + + M +
Sbjct: 4 KFIKPGRLVILLNGKYAGRKAVVIKTFDDATASKSRPYGHCLVAGIDKYPRSIVRSMSRK 63
Query: 186 KIHKRSKIKPFVKVVNYNHLMPT 254
I KR+ I+ FVKVVNYNH+MPT
Sbjct: 64 TILKRTAIRSFVKVVNYNHIMPT 86
Score = 40.7 bits (91), Expect = 0.016
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +2
Query: 311 AKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 406
AKR R + FE ++K+GK+KWFF KLRF
Sbjct: 113 AKRAHTRLAVKKIFEAKHKAGKSKWFFSKLRF 144
>UniRef50_Q4WJD7 Cluster: 60S ribosomal protein L27e; n=6;
Pezizomycotina|Rep: 60S ribosomal protein L27e -
Aspergillus fumigatus (Sartorya fumigata)
Length = 186
Score = 109 bits (263), Expect = 2e-23
Identities = 46/81 (56%), Positives = 62/81 (76%)
Frame = +3
Query: 12 KIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKI 191
K MK G+V ++ GRYAG+K ++V+ D G+ P+ +A VAGI+RYP KV +RMGK +
Sbjct: 53 KFMKVGRVAIITRGRYAGKKVVIVQPNDTGSKAHPFPYAIVAGIERYPLKVTRRMGKKMV 112
Query: 192 HKRSKIKPFVKVVNYNHLMPT 254
KRS+IKPF+K+VNYNHLMPT
Sbjct: 113 EKRSRIKPFIKIVNYNHLMPT 133
Score = 39.5 bits (88), Expect = 0.036
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +2
Query: 257 YTVDFSFEK--FSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 406
YT++ K S + K+ + R+ + + E+RY SGKN+WFF LRF
Sbjct: 135 YTLELEGLKGAISQETFKEVSTREDAKKTVKKALEDRYTSGKNRWFFTPLRF 186
>UniRef50_A0BCG5 Cluster: Chromosome undetermined scaffold_10, whole
genome shotgun sequence; n=8; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_10, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 1051
Score = 105 bits (253), Expect = 4e-22
Identities = 51/119 (42%), Positives = 79/119 (66%), Gaps = 1/119 (0%)
Frame = +3
Query: 3 KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGK 182
+MGK +KPG+++++L+GRYAG+KAI++K +E T D + + V GI RYPRKV KRMG+
Sbjct: 899 EMGKFLKPGRLIVLLAGRYAGKKAILIKANEETTKDCKFPNGLVVGIQRYPRKVTKRMGQ 958
Query: 183 NKIHKRSKIKPFVKVVNYNHLMPTVIQL-TSALKNSAQKT*KTLQNVRSCVSTREYVLK 356
+I KR+ +K F+K +N NH+MPT +L S LK + + ++ V R+ + K
Sbjct: 959 KQIRKRTTLKVFIKQLNLNHIMPTRYRLEESTLKEVRDRIERVKESELKNVEKRKELRK 1017
>UniRef50_Q4N659 Cluster: 60S ribosomal protein L27e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L27e, putative -
Theileria parva
Length = 148
Score = 105 bits (251), Expect = 6e-22
Identities = 51/115 (44%), Positives = 75/115 (65%)
Frame = +3
Query: 6 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 185
MGK++KPG+VV++LSGR AG KA+VV+ + + +PY + VAG+++ P KV K+M
Sbjct: 1 MGKLLKPGRVVILLSGRRAGCKAVVVQTNESSSKKRPYLNCLVAGVEKAPMKVTKKMSSK 60
Query: 186 KIHKRSKIKPFVKVVNYNHLMPTVIQLTSALKNSAQKT*KTLQNVRSCVSTREYV 350
KI KR K+K FVK VN NHLMPT +T+ L + + + ++N S R+ V
Sbjct: 61 KIEKRLKLKAFVKYVNVNHLMPTRYMVTTTLDPKSLVSDEQMENKSSRKEARKSV 115
>UniRef50_Q86LP6 Cluster: 60S ribosomal protein L27; n=4;
Trypanosomatidae|Rep: 60S ribosomal protein L27 -
Leishmania major
Length = 133
Score = 103 bits (248), Expect = 1e-21
Identities = 41/81 (50%), Positives = 63/81 (77%)
Frame = +3
Query: 12 KIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKI 191
K +KPGKVV+V SGRYAG+KA++V+N D + ++PYGH+ +AG+ +YP+KV + M K I
Sbjct: 2 KFLKPGKVVIVTSGRYAGKKAVIVQNTDSKSKERPYGHSLIAGMKKYPKKVVRGMSKRTI 61
Query: 192 HKRSKIKPFVKVVNYNHLMPT 254
+RS++ F++VVN+ H +PT
Sbjct: 62 QRRSRVGVFLRVVNHKHFLPT 82
Score = 44.8 bits (101), Expect = 0.001
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +2
Query: 257 YTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 406
Y +D S E ++ D +K+ + + R F+ RY +G N+WFFQ+LRF
Sbjct: 84 YNMDLSRELRGRINVSDASKKARSKQLVRKLFQARYNAGSNRWFFQRLRF 133
>UniRef50_Q7RNR5 Cluster: 60S ribosomal protein L27 homolog; n=4;
Plasmodium|Rep: 60S ribosomal protein L27 homolog -
Plasmodium yoelii yoelii
Length = 181
Score = 103 bits (247), Expect = 2e-21
Identities = 43/79 (54%), Positives = 62/79 (78%)
Frame = +3
Query: 18 MKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHK 197
+KPGKVV++L+GR AG+KAI++ Y+ T ++PY + VAGI+++P KV K+M K KI K
Sbjct: 97 LKPGKVVIMLNGRRAGKKAIIINTYEGQTRERPYSYCLVAGIEKHPLKVTKKMSKGKIIK 156
Query: 198 RSKIKPFVKVVNYNHLMPT 254
RSK+K FVK +N NH++PT
Sbjct: 157 RSKVKAFVKYINVNHILPT 175
>UniRef50_Q4Q504 Cluster: 60S ribosomal protein L27; n=6;
Trypanosomatidae|Rep: 60S ribosomal protein L27 -
Leishmania major
Length = 134
Score = 100 bits (240), Expect = 1e-20
Identities = 43/83 (51%), Positives = 62/83 (74%)
Frame = +3
Query: 6 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 185
M K +KPGKVV+V +GRYAG KA++V+N D T ++PYG A +AGI +YP+KV + M K
Sbjct: 1 MTKFLKPGKVVIVTAGRYAGHKAVIVQNSDVVTKERPYGRALLAGIKKYPKKVVRGMSKQ 60
Query: 186 KIHKRSKIKPFVKVVNYNHLMPT 254
I +RS++ F++VVN+ H +PT
Sbjct: 61 TIARRSQVGVFLRVVNHKHFLPT 83
Score = 43.6 bits (98), Expect = 0.002
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +2
Query: 257 YTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 406
Y VD S E ++ D +KR + + R F+ RY +G + WFFQ+LRF
Sbjct: 85 YNVDMSKELRGKINVSDASKRSRSKRLVRHVFQARYNAGSSMWFFQRLRF 134
>UniRef50_Q4P3X4 Cluster: 60S ribosomal protein L27; n=8;
Dikarya|Rep: 60S ribosomal protein L27 - Ustilago maydis
(Smut fungus)
Length = 190
Score = 92.3 bits (219), Expect = 5e-18
Identities = 42/75 (56%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
Frame = +3
Query: 33 VVLVLSGRYAGRK-AIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKI 209
V LV Y+ R +V+K +D+G+ DK + + AGI+RYP+KV KRMG KI KRSK+
Sbjct: 63 VSLVALREYSRRNDVVVIKQFDDGSKDKSFPYIIAAGIERYPQKVTKRMGAKKIAKRSKV 122
Query: 210 KPFVKVVNYNHLMPT 254
KPFVKV++YNHLMPT
Sbjct: 123 KPFVKVISYNHLMPT 137
Score = 44.8 bits (101), Expect = 0.001
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +2
Query: 302 KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 406
K+P++R+ + + FEE+Y SGKNKWFF LRF
Sbjct: 156 KEPSQREDAKKQIKQIFEEKYTSGKNKWFFTPLRF 190
>UniRef50_UPI000049913D Cluster: 60S ribosomal protein L27; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L27 - Entamoeba histolytica HM-1:IMSS
Length = 139
Score = 88.6 bits (210), Expect = 6e-17
Identities = 38/83 (45%), Positives = 56/83 (67%)
Frame = +3
Query: 6 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 185
M KI+ PG+VV++LSGR+AG+KA+V +GT D+ YG V G++R P K+ ++M
Sbjct: 1 MSKILAPGRVVIILSGRFAGKKAVVSSVNLQGTKDRKYGFVTVVGVERAPLKITRKMSAK 60
Query: 186 KIHKRSKIKPFVKVVNYNHLMPT 254
R+ +K F KV+N NH+MPT
Sbjct: 61 VQEMRTSVKSFCKVINVNHVMPT 83
>UniRef50_A2DNC1 Cluster: 60S ribosomal protein L27; n=3;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L27
- Trichomonas vaginalis G3
Length = 139
Score = 85.4 bits (202), Expect = 6e-16
Identities = 36/80 (45%), Positives = 59/80 (73%)
Frame = +3
Query: 15 IMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIH 194
+++ G+ V++L GR+AG+KA+V+ Y EGT D+ + +A V GI++YP+KV K M +
Sbjct: 3 LLQAGRFVVMLQGRHAGKKAVVLAAYPEGTEDRKFPYAIVMGIEKYPKKVTKDMPTEVLV 62
Query: 195 KRSKIKPFVKVVNYNHLMPT 254
K++++K FVK VN+NH+M T
Sbjct: 63 KKTQVKLFVKAVNFNHVMLT 82
>UniRef50_Q01A00 Cluster: RL27_PEA 60S ribosomal protein L27
pir||T06451 ribosomal protein L27- garden pea; n=1;
Ostreococcus tauri|Rep: RL27_PEA 60S ribosomal protein
L27 pir||T06451 ribosomal protein L27- garden pea -
Ostreococcus tauri
Length = 184
Score = 78.6 bits (185), Expect = 6e-14
Identities = 35/66 (53%), Positives = 48/66 (72%)
Frame = +3
Query: 21 KPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKR 200
+PGKVV+VL+GRYAG+KA++VKN D+G S PYGHA V G+ PRKV +N +H+
Sbjct: 24 QPGKVVVVLAGRYAGKKAVIVKNVDDGNSAHPYGHALVCGLSTIPRKV-----RNDLHRC 78
Query: 201 SKIKPF 218
++ PF
Sbjct: 79 ARTAPF 84
Score = 42.7 bits (96), Expect = 0.004
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +2
Query: 209 KAFREGCKL*SLDANSYTVDFSFEKFSAKDLKDPAKRK-KLRFNTRVRFEERYKSGKNKW 385
K F + L YT+D +F+ D+ D A +K + + EER+K+GK++W
Sbjct: 118 KTFIKNINYSHLMPTRYTLDVNFKDVVTSDVLDNATKKVAAQKEAKKLLEERFKTGKSRW 177
Query: 386 FFQKLRF 406
FF +L F
Sbjct: 178 FFTRLAF 184
Score = 41.9 bits (94), Expect = 0.007
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +3
Query: 159 KVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPT 254
+V K+M + K KRSK K F+K +NY+HLMPT
Sbjct: 101 QVTKKMDEKKQAKRSKCKTFIKNINYSHLMPT 132
>UniRef50_UPI0000F2B958 Cluster: PREDICTED: similar to ribosomal
protein L27; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to ribosomal protein L27 - Monodelphis domestica
Length = 124
Score = 74.9 bits (176), Expect = 8e-13
Identities = 38/61 (62%), Positives = 44/61 (72%)
Frame = +3
Query: 63 GRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNH 242
G +I+ + D+GTSDK Y HA VAGID YPRK+ +GK KI KRSKIK FV V NYNH
Sbjct: 5 GSSSILFYDTDDGTSDKSYSHAQVAGIDLYPRKLTAALGK-KISKRSKIKFFVAVYNYNH 63
Query: 243 L 245
L
Sbjct: 64 L 64
>UniRef50_A0C4W1 Cluster: 60S ribosomal protein L27; n=1; Paramecium
tetraurelia|Rep: 60S ribosomal protein L27 - Paramecium
tetraurelia
Length = 262
Score = 69.3 bits (162), Expect = 4e-11
Identities = 33/68 (48%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Frame = +3
Query: 81 VKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTVI 260
+K +E T D + + V GI RYPRKV KRMG+ +I KR+ +K F+K +N NH+MPT
Sbjct: 136 IKANEESTKDAKFPNGLVVGIQRYPRKVTKRMGQKQIRKRTTLKVFIKQLNLNHIMPTRY 195
Query: 261 QL-TSALK 281
+L S LK
Sbjct: 196 RLEESTLK 203
Score = 32.7 bits (71), Expect = 4.1
Identities = 12/21 (57%), Positives = 19/21 (90%)
Frame = +3
Query: 3 KMGKIMKPGKVVLVLSGRYAG 65
+MGK +KPG++V++L+GR AG
Sbjct: 63 QMGKFLKPGRLVVLLAGRQAG 83
>UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L27 -
Giardia lamblia ATCC 50803
Length = 135
Score = 68.5 bits (160), Expect = 7e-11
Identities = 35/90 (38%), Positives = 53/90 (58%)
Frame = +3
Query: 15 IMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIH 194
I+KPG V +VL GR+AG+KA++V+ +A VAGI PR++ M +
Sbjct: 5 IIKPGLVCIVLQGRHAGKKAVIVEALPHNERGS---YAIVAGIAALPRRITNSMSDEEAV 61
Query: 195 KRSKIKPFVKVVNYNHLMPTVIQLTSALKN 284
R +++ FVK +N NHLMPT +L + K+
Sbjct: 62 CRGRVRSFVKCMNVNHLMPTSCRLENNYKD 91
>UniRef50_Q98SC5 Cluster: 60S ribosomal protein L27; n=1; Guillardia
theta|Rep: 60S ribosomal protein L27 - Guillardia theta
(Cryptomonas phi)
Length = 144
Score = 64.9 bits (151), Expect = 8e-10
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYD-EGTSDKPYGHAFVAGIDRYPRKVHKRMGK 182
M I K G+VV+VLSG+YAG+KA V+KN + E +K + GI + +K+ M K
Sbjct: 1 MVNIYKTGRVVIVLSGKYAGKKAFVLKNSNIESLCEK---KIIILGIKKEMKKIKYNMSK 57
Query: 183 NKIHKRSKIKPFVKVVNYNHLMPT 254
KI + K F+K +N H+ PT
Sbjct: 58 RKIISNLRFKTFIKTINIKHVFPT 81
>UniRef50_A5I8K6 Cluster: Putative uncharacterized protein; n=1;
Tribolium castaneum|Rep: Putative uncharacterized
protein - Tribolium castaneum (Red flour beetle)
Length = 95
Score = 57.6 bits (133), Expect = 1e-07
Identities = 32/77 (41%), Positives = 42/77 (54%)
Frame = +2
Query: 176 GKE*NPQEVQDKAFREGCKL*SLDANSYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFE 355
G+ N Q VQ++ GC + + S K K P KRK++RF TRV+ +
Sbjct: 19 GRGQNTQRVQNQPLVIGCDEKHVSPHVIGGITSGGPIPTKSSKYPIKRKRVRFQTRVKVQ 78
Query: 356 ERYKSGKNKWFFQKLRF 406
E KSG+NKWFFQK RF
Sbjct: 79 EGSKSGRNKWFFQKGRF 95
>UniRef50_Q3LW52 Cluster: Ribosomal protein L27; n=1; Bigelowiella
natans|Rep: Ribosomal protein L27 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 131
Score = 38.7 bits (86), Expect = 0.063
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Frame = +3
Query: 27 GKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRM--GKNKIH 194
GK++ L+G+YAG+ +VK+Y + + K + H V + ++ K K N
Sbjct: 8 GKLIFSLAGKYAGKYGFIVKSYSKYKNFKNFNHFLVCFLTNTKFTNKNSKSFISKMNDQP 67
Query: 195 KRSKIKPFVKVVNYNHLM 248
K K K +K++N NH++
Sbjct: 68 KIFKYKIKLKILNANHII 85
>UniRef50_Q8SS64 Cluster: 60S RIBOSOMAL PROTEIN L27; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L27
- Encephalitozoon cuniculi
Length = 126
Score = 36.7 bits (81), Expect = 0.25
Identities = 23/77 (29%), Positives = 37/77 (48%)
Frame = +3
Query: 24 PGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRS 203
P +V+V SG+ AG+KA+V+K DE + A + R P++ K + +
Sbjct: 5 PNMIVVVTSGKNAGKKAVVIKQIDE-------RYVLTACVVRIPKEPEDHQPKWIKRRNA 57
Query: 204 KIKPFVKVVNYNHLMPT 254
K +K N HL+ T
Sbjct: 58 KFYIILKKYNIAHLIAT 74
>UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2;
Eukaryota|Rep: 60S ribosomal protein L6 - Dictyostelium
discoideum AX4
Length = 236
Score = 35.5 bits (78), Expect = 0.58
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +3
Query: 12 KIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 101
K + PG V+++L+GR+AG++ + +K D G
Sbjct: 89 KSITPGTVLIILAGRFAGKRVVALKQLDSG 118
>UniRef50_Q0VRK4 Cluster: Putative uncharacterized protein; n=1;
Alcanivorax borkumensis SK2|Rep: Putative
uncharacterized protein - Alcanivorax borkumensis
(strain SK2 / ATCC 700651 / DSM 11573)
Length = 406
Score = 35.1 bits (77), Expect = 0.77
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 12/91 (13%)
Frame = +3
Query: 6 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDR-YPRKVHKRMGK 182
+ +I + V +V++ RY G+ + E D+P GHAF AG+D R+V K G+
Sbjct: 216 IARIAEESPVPIVVARRYIGKIKNSAEEVVEIMPDQPLGHAFRAGVDAGIMRRVGKFTGR 275
Query: 183 NKIHKRS-----------KIKPFVKVVNYNH 242
R+ K+ P + +VNY +
Sbjct: 276 MTYGARTTTVQESFADALKLAPDIPIVNYEY 306
>UniRef50_Q08W76 Cluster: Hydrogen peroxide-inducible genes
activator OxyR; n=1; Stigmatella aurantiaca DW4/3-1|Rep:
Hydrogen peroxide-inducible genes activator OxyR -
Stigmatella aurantiaca DW4/3-1
Length = 228
Score = 34.3 bits (75), Expect = 1.3
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +1
Query: 67 ARLS*SRITTKVPPTSRTGMLSSLVSTGTPGKCTRGWERIKSTRGPR 207
+R S + TT+ +SRTG + S +C R WER++ T GPR
Sbjct: 185 SRSSCATWTTRTSSSSRTG----IASAAKRWRCARAWERMRWTSGPR 227
>UniRef50_Q02BB6 Cluster: Putative uncharacterized protein; n=1;
Solibacter usitatus Ellin6076|Rep: Putative
uncharacterized protein - Solibacter usitatus (strain
Ellin6076)
Length = 192
Score = 33.1 bits (72), Expect = 3.1
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +2
Query: 68 QGYRSQELRRRYLRQAVRACFRRWYRQVPPESAQEDGKE*NPQEVQDKAFREGCK 232
Q Y ++ R+RY Q RA R+W R+ E +E + Q + +RE K
Sbjct: 49 QRYPPRQARQRYCSQGCRAAARKWSRRKAQERYRETAAGQQKRNGQSRRYRERVK 103
>UniRef50_A7TEU5 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 2026
Score = 33.1 bits (72), Expect = 3.1
Identities = 32/101 (31%), Positives = 43/101 (42%), Gaps = 1/101 (0%)
Frame = +3
Query: 51 GRYAGRKAIVVKNYDEGTSDKPYGHAF-VAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKV 227
GRY+ R +V+NY + PY V G++ + K + K + K K FVK
Sbjct: 1808 GRYSIRN--IVENYMKVNPSDPYDVTVDVKGLNDLLDTIDKEKFQKK---KEKYKRFVKE 1862
Query: 228 VNYNHLMPTVIQLTSALKNSAQKT*KTLQNVRSCVSTREYV 350
V YN+ I T L T N R C+S EYV
Sbjct: 1863 VYYNNSYQNSINFTELL---ILIPLHTTYNPRECLSIDEYV 1900
>UniRef50_Q8PSL5 Cluster: Putative uncharacterized protein; n=1;
Methanosarcina mazei|Rep: Putative uncharacterized
protein - Methanosarcina mazei (Methanosarcina frisia)
Length = 1110
Score = 32.7 bits (71), Expect = 4.1
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +2
Query: 245 DANSYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKS 370
D S FSFE+F A +PA R +RF R R E +S
Sbjct: 451 DPGSSPFLFSFERFGATGTGEPALRGSVRFTLRFRMSEETES 492
>UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14;
Archaea|Rep: 50S ribosomal protein L14e - Pyrobaculum
aerophilum
Length = 103
Score = 32.7 bits (71), Expect = 4.1
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +3
Query: 6 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDE 98
M K++ G+VV+ + GR AGRKA+VV DE
Sbjct: 1 MVKVIDIGRVVVKVLGREAGRKAVVVDIVDE 31
>UniRef50_Q3ELB5 Cluster: Cell surface protein; n=1; Bacillus
thuringiensis serovar israelensis ATCC 35646|Rep: Cell
surface protein - Bacillus thuringiensis serovar
israelensis ATCC 35646
Length = 79
Score = 32.3 bits (70), Expect = 5.4
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = -2
Query: 248 HQVIIVYNLHERLYLGPLVDFILSHPLVHFPGVPVDTSDE 129
H +++++LH+ ++ G L F + + PG P T+DE
Sbjct: 9 HWDLVLHHLHQVIFFGTLAVFTTVNTALQVPGFPAGTTDE 48
>UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15;
Pezizomycotina|Rep: 60S ribosomal protein L6 -
Coccidioides immitis
Length = 206
Score = 32.3 bits (70), Expect = 5.4
Identities = 10/33 (30%), Positives = 25/33 (75%)
Frame = +3
Query: 3 KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 101
K+ ++PG ++++L+GR+ G++ I++K+ +G
Sbjct: 53 KLRPSLQPGTILILLAGRFRGKRVILLKHLGQG 85
>UniRef50_Q6YTT4 Cluster: Proliferating-cell nucleolar antigen-like
protein; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Proliferating-cell nucleolar
antigen-like protein - Oryza sativa subsp. japonica
(Rice)
Length = 812
Score = 31.9 bits (69), Expect = 7.2
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 56 VRGSQGYRSQELRRRYLRQAVRACFRRWYRQVPPESAQ--EDGKE*NPQEVQDKAFRE 223
V G+ G + ++RR+L QA+ + +R R PP +A E + P +++ AF E
Sbjct: 24 VAGAGGRKRGRVQRRHLTQALESFWRHAPRPAPPAAAARGEANRSWQPPPLENPAFEE 81
>UniRef50_A2YWD8 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 662
Score = 31.9 bits (69), Expect = 7.2
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 56 VRGSQGYRSQELRRRYLRQAVRACFRRWYRQVPPESAQ--EDGKE*NPQEVQDKAFRE 223
V G+ G + ++RR+L QA+ + +R R PP +A E + P +++ AF E
Sbjct: 24 VAGAGGRKRGRVQRRHLTQALESFWRHAPRPAPPAAAARGEANRSWQPPPLENPAFEE 81
>UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2;
Sordariaceae|Rep: 60S ribosomal protein L6 - Neurospora
crassa
Length = 207
Score = 31.9 bits (69), Expect = 7.2
Identities = 10/26 (38%), Positives = 21/26 (80%)
Frame = +3
Query: 24 PGKVVLVLSGRYAGRKAIVVKNYDEG 101
PG V+++L+GR+ G++ +++K D+G
Sbjct: 41 PGTVLILLAGRFRGKRVVLLKALDQG 66
>UniRef50_Q54LS5 Cluster: Putative uncharacterized protein; n=5;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1693
Score = 31.5 bits (68), Expect = 9.5
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +3
Query: 108 DKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTVIQLTS 272
D + + F GI P ++ +G HK + F+ + NYN + IQL++
Sbjct: 1051 DPSHIYPFPLGISEIPININSNIGFTLYHKIERPPSFINLSNYNDSLQVRIQLSN 1105
>UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=11;
Trypanosomatidae|Rep: 60S ribosomal protein L6, putative
- Leishmania major
Length = 195
Score = 31.5 bits (68), Expect = 9.5
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +3
Query: 12 KIMKPGKVVLVLSGRYAGRKAIVVK 86
K PG + ++L+GR+ GR+A+++K
Sbjct: 31 KSCAPGAIAIILAGRFRGRRAVILK 55
>UniRef50_O15595 Cluster: 60S ribosomal protein L6; n=5; Entamoeba
histolytica|Rep: 60S ribosomal protein L6 - Entamoeba
histolytica
Length = 92
Score = 31.5 bits (68), Expect = 9.5
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 3 KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKP 116
K+ K + PG +++++ G+YAG+K VV +G S P
Sbjct: 53 KLRKSIVPGAILIIVGGKYAGKK--VVSLPSQGVSSAP 88
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 444,172,728
Number of Sequences: 1657284
Number of extensions: 8575843
Number of successful extensions: 28581
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 27456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28538
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 25610991215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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