Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10584
(468 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070827-1|AAL48449.1| 135|Drosophila melanogaster AT27980p pro... 143 1e-34
AE014297-3837|AAF56495.1| 135|Drosophila melanogaster CG4759-PA... 143 1e-34
AE013599-1694|AAF58382.1| 506|Drosophila melanogaster CG17050-P... 31 0.78
DQ398924-1|ABD61624.1| 851|Drosophila melanogaster argonaute-1 ... 31 1.0
DQ398923-1|ABD61623.1| 851|Drosophila melanogaster argonaute-1 ... 31 1.0
DQ398922-1|ABD61622.1| 851|Drosophila melanogaster argonaute-1 ... 31 1.0
DQ398921-1|ABD61621.1| 851|Drosophila melanogaster argonaute-1 ... 31 1.0
DQ398920-1|ABD61620.1| 851|Drosophila melanogaster argonaute-1 ... 31 1.0
DQ398919-1|ABD61619.1| 851|Drosophila melanogaster argonaute-1 ... 31 1.0
DQ398918-1|ABD61618.1| 851|Drosophila melanogaster argonaute-1 ... 31 1.0
DQ398917-1|ABD61617.1| 851|Drosophila melanogaster argonaute-1 ... 31 1.0
BT023945-1|ABB36449.1| 984|Drosophila melanogaster LP02696p pro... 31 1.0
AE013599-1796|AAF58315.1| 950|Drosophila melanogaster CG6671-PB... 31 1.0
AE013599-1795|AAF58313.1| 984|Drosophila melanogaster CG6671-PC... 31 1.0
AE013599-1794|AAF58314.1| 984|Drosophila melanogaster CG6671-PA... 31 1.0
AB035447-1|BAA88078.1| 950|Drosophila melanogaster argonaute pr... 31 1.0
AY070994-1|AAL48616.1| 262|Drosophila melanogaster RE08669p pro... 27 9.6
AY052030-1|AAK93454.1| 1422|Drosophila melanogaster LD47893p pro... 27 9.6
AF104401-1|AAF14115.1| 1827|Drosophila melanogaster SPT6 protein... 27 9.6
AF104400-1|AAF14114.1| 1831|Drosophila melanogaster SPT6 protein... 27 9.6
AE014298-861|AAF46140.1| 1831|Drosophila melanogaster CG12225-PA... 27 9.6
AE014297-4764|AAF57167.1| 262|Drosophila melanogaster CG11522-P... 27 9.6
AE014297-4763|AAF57166.1| 243|Drosophila melanogaster CG11522-P... 27 9.6
>AY070827-1|AAL48449.1| 135|Drosophila melanogaster AT27980p
protein.
Length = 135
Score = 143 bits (346), Expect = 1e-34
Identities = 62/83 (74%), Positives = 75/83 (90%)
Frame = +3
Query: 6 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 185
M KIMK GK+V+VLSGRYAGRKAI+VK +D+GT +KP+GHA VAGIDRYPRKV K+MGKN
Sbjct: 1 MRKIMKQGKIVIVLSGRYAGRKAIIVKTHDDGTPEKPFGHALVAGIDRYPRKVTKKMGKN 60
Query: 186 KIHKRSKIKPFVKVVNYNHLMPT 254
K+ K+SK+KPF+K +NYNHLMPT
Sbjct: 61 KLKKKSKVKPFLKSLNYNHLMPT 83
Score = 83.0 bits (196), Expect = 2e-16
Identities = 44/86 (51%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Frame = +2
Query: 152 PPESAQEDGKE*NPQEVQDKAFREGCKL*SLDANSYTV-DFSFEKFSAKDLKDPAKRKKL 328
P + ++ GK ++ + K F + L YT D SFEK S KDLKDP KRK
Sbjct: 50 PRKVTKKMGKNKLKKKSKVKPFLKSLNYNHLMPTRYTAHDISFEKLSPKDLKDPVKRKTH 109
Query: 329 RFNTRVRFEERYKSGKNKWFFQKLRF 406
RF TRV+FE YK GKNKWFFQKLRF
Sbjct: 110 RFQTRVKFESVYKEGKNKWFFQKLRF 135
>AE014297-3837|AAF56495.1| 135|Drosophila melanogaster CG4759-PA
protein.
Length = 135
Score = 143 bits (346), Expect = 1e-34
Identities = 62/83 (74%), Positives = 75/83 (90%)
Frame = +3
Query: 6 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 185
M KIMK GK+V+VLSGRYAGRKAI+VK +D+GT +KP+GHA VAGIDRYPRKV K+MGKN
Sbjct: 1 MRKIMKQGKIVIVLSGRYAGRKAIIVKTHDDGTPEKPFGHALVAGIDRYPRKVTKKMGKN 60
Query: 186 KIHKRSKIKPFVKVVNYNHLMPT 254
K+ K+SK+KPF+K +NYNHLMPT
Sbjct: 61 KLKKKSKVKPFLKSLNYNHLMPT 83
Score = 83.0 bits (196), Expect = 2e-16
Identities = 44/86 (51%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Frame = +2
Query: 152 PPESAQEDGKE*NPQEVQDKAFREGCKL*SLDANSYTV-DFSFEKFSAKDLKDPAKRKKL 328
P + ++ GK ++ + K F + L YT D SFEK S KDLKDP KRK
Sbjct: 50 PRKVTKKMGKNKLKKKSKVKPFLKSLNYNHLMPTRYTAHDISFEKLSPKDLKDPVKRKTH 109
Query: 329 RFNTRVRFEERYKSGKNKWFFQKLRF 406
RF TRV+FE YK GKNKWFFQKLRF
Sbjct: 110 RFQTRVKFESVYKEGKNKWFFQKLRF 135
>AE013599-1694|AAF58382.1| 506|Drosophila melanogaster CG17050-PA
protein.
Length = 506
Score = 31.1 bits (67), Expect = 0.78
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 257 YTVDFSFEKFSAKDLKDPAKRKKLRF 334
Y +F FE+F KDL+ AK K L+F
Sbjct: 63 YVKEFEFERFHLKDLRSDAKFKHLQF 88
>DQ398924-1|ABD61624.1| 851|Drosophila melanogaster argonaute-1
protein.
Length = 851
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +3
Query: 63 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVKVV 230
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V
Sbjct: 58 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPV 115
>DQ398923-1|ABD61623.1| 851|Drosophila melanogaster argonaute-1
protein.
Length = 851
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +3
Query: 63 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVKVV 230
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V
Sbjct: 58 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPV 115
>DQ398922-1|ABD61622.1| 851|Drosophila melanogaster argonaute-1
protein.
Length = 851
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +3
Query: 63 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVKVV 230
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V
Sbjct: 58 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPV 115
>DQ398921-1|ABD61621.1| 851|Drosophila melanogaster argonaute-1
protein.
Length = 851
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +3
Query: 63 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVKVV 230
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V
Sbjct: 58 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPV 115
>DQ398920-1|ABD61620.1| 851|Drosophila melanogaster argonaute-1
protein.
Length = 851
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +3
Query: 63 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVKVV 230
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V
Sbjct: 58 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPV 115
>DQ398919-1|ABD61619.1| 851|Drosophila melanogaster argonaute-1
protein.
Length = 851
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +3
Query: 63 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVKVV 230
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V
Sbjct: 58 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPV 115
>DQ398918-1|ABD61618.1| 851|Drosophila melanogaster argonaute-1
protein.
Length = 851
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +3
Query: 63 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVKVV 230
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V
Sbjct: 58 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPV 115
>DQ398917-1|ABD61617.1| 851|Drosophila melanogaster argonaute-1
protein.
Length = 851
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +3
Query: 63 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVKVV 230
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V
Sbjct: 58 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPV 115
>BT023945-1|ABB36449.1| 984|Drosophila melanogaster LP02696p
protein.
Length = 984
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +3
Query: 63 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVKVV 230
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V
Sbjct: 145 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPV 202
>AE013599-1796|AAF58315.1| 950|Drosophila melanogaster CG6671-PB,
isoform B protein.
Length = 950
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +3
Query: 63 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVKVV 230
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V
Sbjct: 111 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPV 168
>AE013599-1795|AAF58313.1| 984|Drosophila melanogaster CG6671-PC,
isoform C protein.
Length = 984
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +3
Query: 63 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVKVV 230
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V
Sbjct: 145 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPV 202
>AE013599-1794|AAF58314.1| 984|Drosophila melanogaster CG6671-PA,
isoform A protein.
Length = 984
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +3
Query: 63 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVKVV 230
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V
Sbjct: 145 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPV 202
>AB035447-1|BAA88078.1| 950|Drosophila melanogaster argonaute
protein protein.
Length = 950
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +3
Query: 63 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVKVV 230
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V
Sbjct: 111 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPV 168
>AY070994-1|AAL48616.1| 262|Drosophila melanogaster RE08669p
protein.
Length = 262
Score = 27.5 bits (58), Expect = 9.6
Identities = 8/23 (34%), Positives = 19/23 (82%)
Frame = +3
Query: 18 MKPGKVVLVLSGRYAGRKAIVVK 86
+ PG V+++L+GR+ G++ +++K
Sbjct: 114 LTPGTVLILLAGRHQGKRVVLLK 136
>AY052030-1|AAK93454.1| 1422|Drosophila melanogaster LD47893p
protein.
Length = 1422
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/55 (21%), Positives = 28/55 (50%)
Frame = +2
Query: 137 WYRQVPPESAQEDGKE*NPQEVQDKAFREGCKL*SLDANSYTVDFSFEKFSAKDL 301
W R++ ++ + D +E NP ++ +L LD +++ V+ + F +K +
Sbjct: 660 WARKMAIDAMEYDDEETNPAGALEEILESPERLKDLDLDAFAVELERQGFGSKSI 714
>AF104401-1|AAF14115.1| 1827|Drosophila melanogaster SPT6 protein
protein.
Length = 1827
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/55 (21%), Positives = 28/55 (50%)
Frame = +2
Query: 137 WYRQVPPESAQEDGKE*NPQEVQDKAFREGCKL*SLDANSYTVDFSFEKFSAKDL 301
W R++ ++ + D +E NP ++ +L LD +++ V+ + F +K +
Sbjct: 1065 WARKMAIDAMEYDDEETNPAGALEEILESPERLKDLDLDAFAVELERQGFGSKSI 1119
>AF104400-1|AAF14114.1| 1831|Drosophila melanogaster SPT6 protein
protein.
Length = 1831
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/55 (21%), Positives = 28/55 (50%)
Frame = +2
Query: 137 WYRQVPPESAQEDGKE*NPQEVQDKAFREGCKL*SLDANSYTVDFSFEKFSAKDL 301
W R++ ++ + D +E NP ++ +L LD +++ V+ + F +K +
Sbjct: 1069 WARKMAIDAMEYDDEETNPAGALEEILESPERLKDLDLDAFAVELERQGFGSKSI 1123
>AE014298-861|AAF46140.1| 1831|Drosophila melanogaster CG12225-PA
protein.
Length = 1831
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/55 (21%), Positives = 28/55 (50%)
Frame = +2
Query: 137 WYRQVPPESAQEDGKE*NPQEVQDKAFREGCKL*SLDANSYTVDFSFEKFSAKDL 301
W R++ ++ + D +E NP ++ +L LD +++ V+ + F +K +
Sbjct: 1069 WARKMAIDAMEYDDEETNPAGALEEILESPERLKDLDLDAFAVELERQGFGSKSI 1123
>AE014297-4764|AAF57167.1| 262|Drosophila melanogaster CG11522-PB,
isoform B protein.
Length = 262
Score = 27.5 bits (58), Expect = 9.6
Identities = 8/23 (34%), Positives = 19/23 (82%)
Frame = +3
Query: 18 MKPGKVVLVLSGRYAGRKAIVVK 86
+ PG V+++L+GR+ G++ +++K
Sbjct: 114 LTPGTVLILLAGRHQGKRVVLLK 136
>AE014297-4763|AAF57166.1| 243|Drosophila melanogaster CG11522-PA,
isoform A protein.
Length = 243
Score = 27.5 bits (58), Expect = 9.6
Identities = 8/23 (34%), Positives = 19/23 (82%)
Frame = +3
Query: 18 MKPGKVVLVLSGRYAGRKAIVVK 86
+ PG V+++L+GR+ G++ +++K
Sbjct: 95 LTPGTVLILLAGRHQGKRVVLLK 117
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,608,633
Number of Sequences: 53049
Number of extensions: 383644
Number of successful extensions: 1164
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1160
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1580609772
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -