Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10583
(825 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 48 2e-05
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 44 3e-04
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 44 3e-04
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 40 0.005
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 38 0.017
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 34 0.21
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 34 0.21
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 32 1.1
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 32 1.1
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 32 1.1
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 31 1.4
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 47.6 bits (108), Expect = 2e-05
Identities = 22/54 (40%), Positives = 29/54 (53%)
Frame = +2
Query: 41 ESRFCRLAVGAPWFVRNVDLHDDLGLESIQKYMTSTSERYFDKAMRHDNHLIVA 202
+++ RL G WFVRN LH DL L ++ + S RY D+ RH N L A
Sbjct: 825 QNKVARLITGCEWFVRNTTLHRDLKLATVFDEINKHSSRYHDRLERHRNRLASA 878
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 44.0 bits (99), Expect = 3e-04
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 41 ESRFCRLAVGAPWFVRNVDLHDDLGLESIQKYMTSTSERYFDKAMRHDNHL 193
+SR R+ GAPW++RN ++H DL ++ + + + +Y +K H N L
Sbjct: 816 QSRILRIITGAPWYLRNENIHRDLKIKLVIEVIAEKKTKYNEKLTTHTNPL 866
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 44.0 bits (99), Expect = 3e-04
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 41 ESRFCRLAVGAPWFVRNVDLHDDLGLESIQKYMTSTSERYFDKAMRHDNHL 193
+SR R+ GAPW++RN ++H DL ++ + + + +Y +K H N L
Sbjct: 816 QSRILRIITGAPWYLRNENIHRDLKIKLVIEVIAEKKTKYNEKLTTHTNPL 866
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 39.5 bits (88), Expect = 0.005
Identities = 18/54 (33%), Positives = 31/54 (57%)
Frame = +2
Query: 41 ESRFCRLAVGAPWFVRNVDLHDDLGLESIQKYMTSTSERYFDKAMRHDNHLIVA 202
++R R P++VR LH DL L ++++ ++ + RY D+ RH H I+A
Sbjct: 831 QNRAMRAITDCPYYVRGTTLHRDLNLHTVEEQISRHTSRYSDRLRRH--HSILA 882
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 37.9 bits (84), Expect = 0.017
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 41 ESRFCRLAVGAPWFVRNVDLHDDLGLESIQKYMTSTSERY 160
+S+ R GAPW+VR+ ++ DL + S+ +T E+Y
Sbjct: 818 QSKILRTITGAPWYVRSENIQRDLNIPSVTNAITELKEKY 857
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 34.3 bits (75), Expect = 0.21
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Frame = +2
Query: 41 ESRFCRLAVGAPWFVRNVDLHDDLGLESIQKYMTSTSERYFDKAMRHDNHL-------IV 199
+++ R GAPW++R D+ DL + + + + +++Y ++ H N L V
Sbjct: 830 QAKTLRRISGAPWYMRTRDIERDLKVPKLGDKLQNIAQKYMERLNVHPNSLARKLGTAAV 889
Query: 200 ADADYSPNPDHARASHHP 253
+AD HHP
Sbjct: 890 VNADPRTRVKRRLKRHHP 907
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 34.3 bits (75), Expect = 0.21
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Frame = +2
Query: 41 ESRFCRLAVGAPWFVRNVDLHDDLGLESIQKYMTSTSERYFDKAMRHDNHL-------IV 199
+++ R GAPW++R D+ DL + + + + +++Y ++ H N L V
Sbjct: 632 QAKTLRRISGAPWYMRTRDIERDLKVPKLGDKLQNIAQKYLERLNVHPNSLARKLGTAAV 691
Query: 200 ADADYSPNPDHARASHHP 253
+AD HHP
Sbjct: 692 VNADPRTRVKRRLKRHHP 709
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 31.9 bits (69), Expect = 1.1
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = +2
Query: 41 ESRFCRLAVGAPWFVRNVDLHDDLGLESIQKYMTSTSERYFDKAMRHDNHLI 196
E+++ R + A + R D+ ++S + S+RY + H+N LI
Sbjct: 889 ENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQRYANSLTDHENPLI 940
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 31.9 bits (69), Expect = 1.1
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = +2
Query: 41 ESRFCRLAVGAPWFVRNVDLHDDLGLESIQKYMTSTSERYFDKAMRHDNHLI 196
E+++ R + A + R D+ ++S + S+RY + H+N LI
Sbjct: 889 ENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQRYANSLTDHENPLI 940
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 31.9 bits (69), Expect = 1.1
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = +2
Query: 41 ESRFCRLAVGAPWFVRNVDLHDDLGLESIQKYMTSTSERYFDKAMRHDNHLI 196
E+++ R + A + R D+ ++S + S+RY + H+N LI
Sbjct: 889 ENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQRYANSLTDHENPLI 940
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 31.5 bits (68), Expect = 1.4
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = +2
Query: 41 ESRFCRLAVGAPWFVRNVDLHDDLGLESIQKYMTSTSERYFDKAMRHDNHLI 196
E+++ R + A + R D+ ++S + S+RY + H+N LI
Sbjct: 442 ENKYIRRIINASRYTRQADIRTKYNIKSFDETFDKASQRYANSLTDHENPLI 493
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,565,712
Number of Sequences: 53049
Number of extensions: 625642
Number of successful extensions: 1222
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1222
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3901127880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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