Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10583
         (825 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          24   2.0  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    24   2.0  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      24   2.0  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          24   2.0  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   2.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   2.6  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   4.5  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    23   4.5  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    23   4.5  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   7.9  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -2

Query: 821 FKNCSQFIVNLFFSVTAIARNSNCGTCVIP 732
           F    +F+VNL      I RNS+    V+P
Sbjct: 538 FMQMDEFVVNLKSGSNTIERNSHESVFVVP 567


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -2

Query: 449 KFWHTHDGLIQTAPLRRSDEKLSELIHGL 363
           K W   D L       ++  KL E+IHGL
Sbjct: 226 KIWLRPDWLFNLTKYGKNQIKLLEIIHGL 254


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -2

Query: 821 FKNCSQFIVNLFFSVTAIARNSNCGTCVIP 732
           F    +F+VNL      I RNS+    V+P
Sbjct: 538 FMQMDEFVVNLKSGSNTIERNSHESVFVVP 567


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -2

Query: 821 FKNCSQFIVNLFFSVTAIARNSNCGTCVIPS 729
           F    +F+VNL      I RNS+    V+P+
Sbjct: 164 FMQMDEFVVNLKSGSNTIERNSHESXFVVPT 194


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = -2

Query: 515 TETWLENGSVHKHQAFAFHSSLKFWHTHDGLIQTAPLRRSDEKLSE 378
           T TWL+ G +  + +  +  ++K   T DG+I  A L+ S  + S+
Sbjct: 838 TVTWLKGGKIELNPSTNYRVTVKREVTPDGVI--AQLQISSAEASD 881


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = -2

Query: 515 TETWLENGSVHKHQAFAFHSSLKFWHTHDGLIQTAPLRRSDEKLSE 378
           T TWL+ G +  + +  +  ++K   T DG+I  A L+ S  + S+
Sbjct: 834 TVTWLKGGKIELNPSTNYRVTVKREVTPDGVI--AQLQISSAEASD 877


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 12/32 (37%), Positives = 12/32 (37%)
 Frame = -2

Query: 821 FKNCSQFIVNLFFSVTAIARNSNCGTCVIPSW 726
           F    QFI NL      I RNS       P W
Sbjct: 559 FVELDQFIQNLHAGENTIIRNSQQAPGQSPDW 590


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -2

Query: 785 FSVTAIARNSNCGTCVIPSWT*ILFEIRL 699
           F +  I +     TCV+  WT I + I L
Sbjct: 91  FKIAPIFKGIGYATCVLSCWTNIYYIIIL 119


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -2

Query: 785 FSVTAIARNSNCGTCVIPSWT*ILFEIRL 699
           F +  I +     TCV+  WT I + I L
Sbjct: 144 FKIAPIFKGIGYATCVLSCWTNIYYIIIL 172


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
 Frame = -2

Query: 170 PYRSTVPTLTSCISGLIRGPGRRVGQRSSQT---MELRRLTCKSG 45
           PYR   P ++   S  +R PG+      + T   +E   + C +G
Sbjct: 493 PYRLNKPLMSLITSSEVRQPGKAPNYSVNWTIGQLEAEVINCTTG 537


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,882
Number of Sequences: 438
Number of extensions: 4093
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26338809
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)