Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10583
         (825 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g22740.1 68418.m02656 glycosyl transferase family 2 protein s...    28   6.5  
At2g18130.1 68415.m02110 purple acid phosphatase (PAP11) identic...    28   6.5  

>At5g22740.1 68418.m02656 glycosyl transferase family 2 protein
           similar to beta-(1-3)-glucosyl transferase GB:AAC62210
           GI:3687658 from [Bradyrhizobium japonicum], cellulose
           synthase from Agrobacterium tumeficiens [gi:710492] and
           Agrobacterium radiobacter [gi:710493]; contains Pfam
           glycosyl transferase, group 2 family protein domain
           PF00535
          Length = 534

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 173 MRHDNHLIVADADYSPNPDHARAS 244
           ++H  ++++ DAD+ P PD  R S
Sbjct: 185 VKHCEYVVIFDADFQPEPDFLRRS 208


>At2g18130.1 68415.m02110 purple acid phosphatase (PAP11) identical
           to purple acid phosphatase (PAP11) GI:20257484 from
           [Arabidopsis thaliana]
          Length = 441

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = +2

Query: 113 GLESIQKYMTSTSERYFDKAMRHDNHLIVADADYSPNPDHARASHH 250
           G ++     T++S RYF+    + +H  +   +Y P+   +R S H
Sbjct: 94  GSDNKNAIATTSSYRYFNYTSGYLHHATIKKLEYDPSKSRSRCSLH 139


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,719,810
Number of Sequences: 28952
Number of extensions: 294570
Number of successful extensions: 734
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 734
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1892353600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)