Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10580
         (483 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011442-1|AAR99100.1|  147|Drosophila melanogaster RE59709p pro...   140   1e-33
AE014297-4525|AAN14210.1|  147|Drosophila melanogaster CG7939-PC...   140   1e-33
Y13939-1|CAA74278.1|  134|Drosophila melanogaster ribosomal prot...   136   1e-32
U92431-1|AAB51389.1|  134|Drosophila melanogaster ribosomal prot...   136   1e-32
AY070656-1|AAL48127.1|  134|Drosophila melanogaster RH03940p pro...   136   1e-32
AE014297-4527|AAN14211.1|  134|Drosophila melanogaster CG7939-PB...   136   1e-32
AE014297-4526|AAF57001.1|  134|Drosophila melanogaster CG7939-PA...   136   1e-32
X00848-1|CAA25404.1|  133|Drosophila melanogaster ribosomal prot...   133   1e-31
BT030157-1|ABN49296.1|  126|Drosophila melanogaster IP17707p pro...    40   0.002
AE014297-100|ABI31129.1|  299|Drosophila melanogaster CG41463-PA...    28   5.8  

>BT011442-1|AAR99100.1|  147|Drosophila melanogaster RE59709p
           protein.
          Length = 147

 Score =  140 bits (338), Expect = 1e-33
 Identities = 61/72 (84%), Positives = 64/72 (88%)
 Frame = +1

Query: 40  YKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIG 219
           +KM IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVRRRFKGQYLMPNIG
Sbjct: 12  FKMTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIG 71

Query: 220 YGSNKKTRHMLP 255
           YGSNK+TRHMLP
Sbjct: 72  YGSNKRTRHMLP 83



 Score =  108 bits (259), Expect = 4e-24
 Identities = 50/65 (76%), Positives = 57/65 (87%)
 Frame = +3

Query: 252 PNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 431
           P GF+K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN   RLR
Sbjct: 83  PTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRLR 142

Query: 432 SQENE 446
           SQENE
Sbjct: 143 SQENE 147


>AE014297-4525|AAN14210.1|  147|Drosophila melanogaster CG7939-PC,
           isoform C protein.
          Length = 147

 Score =  140 bits (338), Expect = 1e-33
 Identities = 61/72 (84%), Positives = 64/72 (88%)
 Frame = +1

Query: 40  YKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIG 219
           +KM IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVRRRFKGQYLMPNIG
Sbjct: 12  FKMTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIG 71

Query: 220 YGSNKKTRHMLP 255
           YGSNK+TRHMLP
Sbjct: 72  YGSNKRTRHMLP 83



 Score =  108 bits (259), Expect = 4e-24
 Identities = 50/65 (76%), Positives = 57/65 (87%)
 Frame = +3

Query: 252 PNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 431
           P GF+K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN   RLR
Sbjct: 83  PTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRLR 142

Query: 432 SQENE 446
           SQENE
Sbjct: 143 SQENE 147


>Y13939-1|CAA74278.1|  134|Drosophila melanogaster ribosomal protein
           49 protein.
          Length = 134

 Score =  136 bits (330), Expect = 1e-32
 Identities = 60/70 (85%), Positives = 62/70 (88%)
 Frame = +1

Query: 46  MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 225
           M IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVRRRFKGQYLMPNIGYG
Sbjct: 1   MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60

Query: 226 SNKKTRHMLP 255
           SNK+TRHMLP
Sbjct: 61  SNKRTRHMLP 70



 Score =  108 bits (259), Expect = 4e-24
 Identities = 50/65 (76%), Positives = 57/65 (87%)
 Frame = +3

Query: 252 PNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 431
           P GF+K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN   RLR
Sbjct: 70  PTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRLR 129

Query: 432 SQENE 446
           SQENE
Sbjct: 130 SQENE 134


>U92431-1|AAB51389.1|  134|Drosophila melanogaster ribosomal protein
           49 protein.
          Length = 134

 Score =  136 bits (330), Expect = 1e-32
 Identities = 60/70 (85%), Positives = 62/70 (88%)
 Frame = +1

Query: 46  MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 225
           M IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVRRRFKGQYLMPNIGYG
Sbjct: 1   MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60

Query: 226 SNKKTRHMLP 255
           SNK+TRHMLP
Sbjct: 61  SNKRTRHMLP 70



 Score =  108 bits (259), Expect = 4e-24
 Identities = 50/65 (76%), Positives = 57/65 (87%)
 Frame = +3

Query: 252 PNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 431
           P GF+K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN   RLR
Sbjct: 70  PTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRLR 129

Query: 432 SQENE 446
           SQENE
Sbjct: 130 SQENE 134


>AY070656-1|AAL48127.1|  134|Drosophila melanogaster RH03940p
           protein.
          Length = 134

 Score =  136 bits (330), Expect = 1e-32
 Identities = 60/70 (85%), Positives = 62/70 (88%)
 Frame = +1

Query: 46  MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 225
           M IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVRRRFKGQYLMPNIGYG
Sbjct: 1   MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60

Query: 226 SNKKTRHMLP 255
           SNK+TRHMLP
Sbjct: 61  SNKRTRHMLP 70



 Score =  108 bits (259), Expect = 4e-24
 Identities = 50/65 (76%), Positives = 57/65 (87%)
 Frame = +3

Query: 252 PNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 431
           P GF+K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN   RLR
Sbjct: 70  PTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRLR 129

Query: 432 SQENE 446
           SQENE
Sbjct: 130 SQENE 134


>AE014297-4527|AAN14211.1|  134|Drosophila melanogaster CG7939-PB,
           isoform B protein.
          Length = 134

 Score =  136 bits (330), Expect = 1e-32
 Identities = 60/70 (85%), Positives = 62/70 (88%)
 Frame = +1

Query: 46  MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 225
           M IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVRRRFKGQYLMPNIGYG
Sbjct: 1   MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60

Query: 226 SNKKTRHMLP 255
           SNK+TRHMLP
Sbjct: 61  SNKRTRHMLP 70



 Score =  108 bits (259), Expect = 4e-24
 Identities = 50/65 (76%), Positives = 57/65 (87%)
 Frame = +3

Query: 252 PNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 431
           P GF+K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN   RLR
Sbjct: 70  PTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRLR 129

Query: 432 SQENE 446
           SQENE
Sbjct: 130 SQENE 134


>AE014297-4526|AAF57001.1|  134|Drosophila melanogaster CG7939-PA,
           isoform A protein.
          Length = 134

 Score =  136 bits (330), Expect = 1e-32
 Identities = 60/70 (85%), Positives = 62/70 (88%)
 Frame = +1

Query: 46  MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 225
           M IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVRRRFKGQYLMPNIGYG
Sbjct: 1   MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60

Query: 226 SNKKTRHMLP 255
           SNK+TRHMLP
Sbjct: 61  SNKRTRHMLP 70



 Score =  108 bits (259), Expect = 4e-24
 Identities = 50/65 (76%), Positives = 57/65 (87%)
 Frame = +3

Query: 252 PNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 431
           P GF+K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN   RLR
Sbjct: 70  PTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRLR 129

Query: 432 SQENE 446
           SQENE
Sbjct: 130 SQENE 134


>X00848-1|CAA25404.1|  133|Drosophila melanogaster ribosomal protein
           49 protein.
          Length = 133

 Score =  133 bits (321), Expect = 1e-31
 Identities = 59/70 (84%), Positives = 61/70 (87%)
 Frame = +1

Query: 46  MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 225
           M IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRV RRFKGQYLMPNIGYG
Sbjct: 1   MTIRPAYRPKIVKKRTKDFIRHQSDRYAKLSHKWRKPKGIDNRVGRRFKGQYLMPNIGYG 60

Query: 226 SNKKTRHMLP 255
           SNK+TRHMLP
Sbjct: 61  SNKRTRHMLP 70



 Score = 55.6 bits (128), Expect = 3e-08
 Identities = 27/51 (52%), Positives = 37/51 (72%)
 Frame = +3

Query: 252 PNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIR 404
           P GF+K LVHNV+ELE+L+MQN +   E+    S  + K I+ERA+QLS+R
Sbjct: 70  PTGFKKFLVHNVRELEVLLMQNPRLLREMP-TASPPRSKEIIERAKQLSLR 119


>BT030157-1|ABN49296.1|  126|Drosophila melanogaster IP17707p
           protein.
          Length = 126

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 17/37 (45%), Positives = 25/37 (67%)
 Frame = +3

Query: 162 Y*QQSPQAIQGSILDAQHRLRFQQEDPSYAPNGFRKV 272
           Y QQS   +QG++ DAQHRLR +Q  P +A +  ++V
Sbjct: 7   YRQQSASPLQGTVSDAQHRLRIEQAHPPHAAHRIQEV 43



 Score = 38.7 bits (86), Expect = 0.004
 Identities = 23/61 (37%), Positives = 32/61 (52%)
 Frame = +2

Query: 272 PSSQC*RAGNLDDAKQEVLRRDRSRCLFEEAEADRGKSPAAQHQSDECGRSPPVPGERIN 451
           P +Q  RAG    A+  +LRRDR R L +EA+ D     AA     +  RSP    ER++
Sbjct: 44  PGAQRARAGGPAHAEPRLLRRDRPRRLLQEAQGDCRARQAAVGPPHQPQRSPAFSRERVS 103

Query: 452 I 454
           +
Sbjct: 104 L 104


>AE014297-100|ABI31129.1|  299|Drosophila melanogaster CG41463-PA
           protein.
          Length = 299

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +2

Query: 299 NLDDAKQEVLRRDRSRCL-FEEAEADRGKSPAAQHQS 406
           NL  ++   LRR RSRCL +      R  SP+ +H S
Sbjct: 132 NLSRSRSRTLRRSRSRCLGWSCWSLRRSPSPSRRHHS 168


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,775,578
Number of Sequences: 53049
Number of extensions: 426491
Number of successful extensions: 1399
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1398
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1684597257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)