Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10579
(807 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 166 5e-40
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 153 4e-36
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 146 8e-34
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 133 4e-30
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 132 1e-29
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 127 4e-28
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 115 2e-24
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 110 3e-23
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 105 2e-21
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 100 4e-20
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 94 4e-18
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 93 7e-18
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 91 3e-17
UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2... 90 5e-17
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 87 6e-16
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 82 1e-14
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 82 1e-14
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 82 2e-14
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 73 6e-12
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 73 6e-12
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 73 9e-12
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 72 1e-11
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 72 1e-11
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 72 2e-11
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 71 3e-11
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 71 3e-11
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 70 6e-11
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 69 1e-10
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 69 1e-10
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 65 2e-09
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 65 2e-09
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 65 2e-09
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 64 3e-09
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 64 4e-09
UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;... 62 2e-08
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 58 2e-07
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 58 3e-07
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 58 3e-07
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 57 6e-07
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 55 2e-06
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 53 1e-05
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 52 2e-05
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 52 2e-05
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 50 5e-05
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 50 9e-05
UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3; ... 49 1e-04
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 49 1e-04
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 48 2e-04
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 48 2e-04
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 48 4e-04
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 48 4e-04
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 48 4e-04
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 47 5e-04
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 46 0.001
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 46 0.001
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 45 0.002
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 45 0.002
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 45 0.003
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 44 0.003
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 44 0.003
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 44 0.005
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 43 0.010
UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2; Mycoplas... 42 0.018
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 41 0.032
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 41 0.032
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 40 0.097
UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3; Bacteria... 40 0.097
UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n... 39 0.17
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 39 0.17
UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;... 38 0.23
UniRef50_UPI0000DA3DCA Cluster: PREDICTED: similar to 40S riboso... 38 0.30
UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1; Neoricke... 38 0.30
UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1; ... 38 0.39
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 38 0.39
UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.39
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 37 0.52
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 37 0.52
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 37 0.69
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 36 1.2
UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1; N... 36 1.6
UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1; ... 36 1.6
UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Re... 35 2.8
UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium falciparu... 35 2.8
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 35 2.8
UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4; Ricketts... 35 2.8
UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondr... 34 3.7
UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 34 4.8
UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n... 33 8.5
UniRef50_Q9MTD9 Cluster: Ribosomal protein S5; n=1; Toxoplasma g... 33 8.5
UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella ve... 33 8.5
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 166 bits (404), Expect = 5e-40
Identities = 80/88 (90%), Positives = 83/88 (94%), Gaps = 1/88 (1%)
Frame = +1
Query: 256 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 435
EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD NGH+GLGVKCSKEVATAI
Sbjct: 92 EIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAI 151
Query: 436 RGAIILAKLSVLPVRRGYWGNKIGS-HT 516
RGAIILAKLS++PVRRGYWGNKIG HT
Sbjct: 152 RGAIILAKLSIVPVRRGYWGNKIGKPHT 179
Score = 132 bits (320), Expect = 8e-30
Identities = 60/83 (72%), Positives = 64/83 (77%)
Frame = +3
Query: 507 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 686
KPHTVPCKVTG+CGSV VRLIPAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T TLGN
Sbjct: 176 KPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGN 235
Query: 687 FXXXXXXXXXXXXXXLTPDLWRD 755
F LTPDLW++
Sbjct: 236 FAKATFDAISKTYSYLTPDLWKE 258
Score = 62.1 bits (144), Expect = 2e-08
Identities = 28/38 (73%), Positives = 32/38 (84%)
Frame = +2
Query: 143 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKES 256
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKES
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 153 bits (372), Expect = 4e-36
Identities = 75/88 (85%), Positives = 78/88 (88%), Gaps = 1/88 (1%)
Frame = +1
Query: 256 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 435
EIIDFFLG SL DEVLKIMPVQKQT AGQ TRFKAFV IGD NGH+GL VKCSKEVATAI
Sbjct: 32 EIIDFFLGASLKDEVLKIMPVQKQTCAGQHTRFKAFVPIGDYNGHVGLSVKCSKEVATAI 91
Query: 436 RGAIILAKLSVLPVRRGYWGNKIGS-HT 516
RGAIILAKLS++PV RGYWGNKIG HT
Sbjct: 92 RGAIILAKLSIVPVCRGYWGNKIGKPHT 119
Score = 49.6 bits (113), Expect = 9e-05
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = +3
Query: 507 KPHTVPCKVTGKCGSVTVRLIPAP 578
KPHTVPCKVTG+C SV V LIPAP
Sbjct: 116 KPHTVPCKVTGRCSSVLVHLIPAP 139
Score = 48.0 bits (109), Expect = 3e-04
Identities = 22/31 (70%), Positives = 25/31 (80%)
Frame = +2
Query: 164 VPVTKLGRLVREGKIDKLESIYLFSLPIKES 256
+PVTKLG L+ + KI LE IYLFSLPIKES
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKES 31
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 146 bits (353), Expect = 8e-34
Identities = 67/106 (63%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +1
Query: 202 KNRQTREHLLVFFTNQRIEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 381
K + E L + +I+D+FL P LNDEV+K++PVQKQTRAGQRTRFKAFV IGD+
Sbjct: 48 KIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQKQTRAGQRTRFKAFVVIGDS 106
Query: 382 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGS-HT 516
+GH+GLG+KC+KEVATAIRGAII+ KLS++P+RRGYWG +G HT
Sbjct: 107 DGHVGLGIKCAKEVATAIRGAIIMGKLSIMPIRRGYWGTALGDPHT 152
Score = 116 bits (280), Expect = 5e-25
Identities = 51/84 (60%), Positives = 62/84 (73%)
Frame = +3
Query: 510 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 689
PHTVP KV+GKCGSVTVRL+PAPRG G+V+APV K+ LQ+AG++DCYT +RGST TLGNF
Sbjct: 150 PHTVPVKVSGKCGSVTVRLVPAPRGAGLVAAPVTKRFLQLAGIEDCYTQSRGSTKTLGNF 209
Query: 690 XXXXXXXXXXXXXXLTPDLWRDIP 761
LTP+LW + P
Sbjct: 210 VKAAFAAASLTYGILTPNLWAERP 233
Score = 62.9 bits (146), Expect = 9e-09
Identities = 26/37 (70%), Positives = 33/37 (89%)
Frame = +2
Query: 143 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKE 253
++++KEWVPVTKLGRLV+ GKI +E IYL+SLPIKE
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIKE 64
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 133 bits (322), Expect = 4e-30
Identities = 63/72 (87%), Positives = 67/72 (93%)
Frame = +1
Query: 292 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 471
DEVLKIMPVQKQT AGQRTRF AFVAIGD NGH GLGVKCSKEVATAIR AIILAKLS++
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIV 107
Query: 472 PVRRGYWGNKIG 507
P+R+GYWGNKIG
Sbjct: 108 PLRQGYWGNKIG 119
Score = 120 bits (288), Expect = 6e-26
Identities = 55/83 (66%), Positives = 61/83 (73%)
Frame = +3
Query: 507 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 686
KP+TVPCKVTG CGSV V LIPAPRGTG+VSAPVPKKLL MAG+ DCYTSAR T +LGN
Sbjct: 120 KPNTVPCKVTGHCGSVLVCLIPAPRGTGMVSAPVPKKLLMMAGIDDCYTSARDCTASLGN 179
Query: 687 FXXXXXXXXXXXXXXLTPDLWRD 755
F LTPDLW++
Sbjct: 180 FAKATFDTISKTYTYLTPDLWKE 202
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 132 bits (318), Expect = 1e-29
Identities = 62/101 (61%), Positives = 80/101 (79%), Gaps = 2/101 (1%)
Frame = +1
Query: 220 EHLLVF-FTNQRIEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 396
EH+ +F + +I++ F+G L DEV+KI PVQKQT AGQR RFKAFV +GD NGHIG
Sbjct: 69 EHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQKQTTAGQRMRFKAFVVVGDCNGHIG 128
Query: 397 LGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGS-HT 516
LGVK KEVA +I+G++ILAKL+++PVRRGYWG+K+G HT
Sbjct: 129 LGVKACKEVAHSIQGSMILAKLNIVPVRRGYWGSKLGEPHT 169
Score = 96.7 bits (230), Expect = 6e-19
Identities = 46/83 (55%), Positives = 54/83 (65%)
Frame = +3
Query: 507 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 686
+PHT+P KV GKCGSV VRLIPAPRG GIV++ KK+L MAG+ D YT +RG T TLGN
Sbjct: 166 EPHTIPTKVHGKCGSVHVRLIPAPRGAGIVASGTVKKVLAMAGLHDVYTCSRGHTRTLGN 225
Query: 687 FXXXXXXXXXXXXXXLTPDLWRD 755
LTPDLW +
Sbjct: 226 SVKATYEALKNSYGFLTPDLWAE 248
Score = 56.8 bits (131), Expect = 6e-07
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = +2
Query: 146 EDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKE 253
+D+ WVP TKLGRLV++GKI LE I+LFSLPIKE
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLFSLPIKE 80
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 127 bits (306), Expect = 4e-28
Identities = 58/87 (66%), Positives = 70/87 (80%)
Frame = +1
Query: 247 QRIEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 426
+ +IID L P L DEV+ I PVQKQTRAGQRTRFKA V +GD+NGH+GLG+K +KEVA
Sbjct: 64 KEFQIIDTLL-PGLQDEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVA 122
Query: 427 TAIRGAIILAKLSVLPVRRGYWGNKIG 507
AIR II+AKLSV+P+RRGYWG +G
Sbjct: 123 GAIRAGIIIAKLSVIPIRRGYWGTNLG 149
Score = 98.7 bits (235), Expect = 2e-19
Identities = 46/85 (54%), Positives = 57/85 (67%)
Frame = +3
Query: 507 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 686
+PH++ K TGKCGSVTVRLIPAPRG+GIV++P KKLLQ+AGV+D YT + G T TL N
Sbjct: 150 QPHSLATKTTGKCGSVTVRLIPAPRGSGIVASPAVKKLLQLAGVEDVYTQSNGKTRTLEN 209
Query: 687 FXXXXXXXXXXXXXXLTPDLWRDIP 761
LTP+LW + P
Sbjct: 210 TLKAAFVAIGNTYGFLTPNLWAEQP 234
Score = 54.4 bits (125), Expect = 3e-06
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = +2
Query: 149 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKE 253
++K WVPVTKLGRLV+ GKI +E I+L SLP+KE
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVKE 65
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 115 bits (276), Expect = 2e-24
Identities = 55/86 (63%), Positives = 59/86 (68%)
Frame = +3
Query: 498 QDRKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 677
Q R KVTG+CGSV VRLIPAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T T
Sbjct: 115 QTRAGQRTRFKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTAT 174
Query: 678 LGNFXXXXXXXXXXXXXXLTPDLWRD 755
LGNF LTPDLW++
Sbjct: 175 LGNFAKATFDAISKTYSYLTPDLWKE 200
Score = 67.7 bits (158), Expect = 3e-10
Identities = 32/34 (94%), Positives = 32/34 (94%)
Frame = +1
Query: 256 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 357
EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFK
Sbjct: 92 EIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFK 125
Score = 62.9 bits (146), Expect = 9e-09
Identities = 28/38 (73%), Positives = 32/38 (84%)
Frame = +2
Query: 143 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKES 256
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKES
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 110 bits (265), Expect = 3e-23
Identities = 51/64 (79%), Positives = 54/64 (84%)
Frame = +3
Query: 492 G*QDRKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 671
G + RKPHTVP KVTG+CGSV VRLIPAPRGTG VSAPVPKKLL MAG+ DCYTSARG T
Sbjct: 111 GNEIRKPHTVPGKVTGRCGSVLVRLIPAPRGTGFVSAPVPKKLLMMAGIDDCYTSARGHT 170
Query: 672 GTLG 683
T G
Sbjct: 171 ATWG 174
Score = 96.7 bits (230), Expect = 6e-19
Identities = 43/54 (79%), Positives = 49/54 (90%)
Frame = +1
Query: 343 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKI 504
+ RFKAFVAIGD+NG +G GVKCSKE ATAIRGA+ILAKLS+LPV RGYWGN+I
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGYWGNEI 114
Score = 33.5 bits (73), Expect = 6.4
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +2
Query: 149 DQKEWVPVTKLGRLVREGKI 208
+ KEW+PVT LGRLV++ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 105 bits (251), Expect = 2e-21
Identities = 51/90 (56%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
Frame = +1
Query: 256 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 435
EI+D G S+ +EVL I VQKQTRAGQ+TR KA V +GD GH+G+G K SKE A+AI
Sbjct: 53 EIVDLLCGNSIKEEVLSIKSVQKQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEAASAI 112
Query: 436 RGAIILAKLSVLPVRRGYWGNKIGS-HTPS 522
RGAI AK ++ PVR G W G HT S
Sbjct: 113 RGAIARAKCAIRPVRLGLWDGAQGKPHTVS 142
Score = 91.1 bits (216), Expect = 3e-17
Identities = 40/86 (46%), Positives = 54/86 (62%)
Frame = +3
Query: 507 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 686
KPHTV CK +GKCG+ V++IPAPRGTGI+S V KK+ ++AG++D YT + G+T T N
Sbjct: 137 KPHTVSCKGSGKCGTSVVQVIPAPRGTGIISGSVNKKIFELAGIKDLYTLSFGATSTTEN 196
Query: 687 FXXXXXXXXXXXXXXLTPDLWRDIPR 764
F + PD W + PR
Sbjct: 197 FAKASIAALEATSSMILPDQWEEKPR 222
Score = 39.9 bits (89), Expect = 0.074
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +2
Query: 143 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKE 253
++++ EW+P T +GRLV+ KI LE I+ FS I+E
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKFSHVIRE 51
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 100 bits (240), Expect = 4e-20
Identities = 49/76 (64%), Positives = 53/76 (69%)
Frame = +3
Query: 528 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXX 707
KVTG+CGSV VRL APRGTGIVSAPVPKKLL MA + DCYT ARG T TLGNF
Sbjct: 125 KVTGRCGSVLVRLFSAPRGTGIVSAPVPKKLLMMA-IDDCYTLARGCTATLGNFAKATFD 183
Query: 708 XXXXXXXXLTPDLWRD 755
LTPDLW++
Sbjct: 184 AISKIYSYLTPDLWKE 199
Score = 60.5 bits (140), Expect = 5e-08
Identities = 29/34 (85%), Positives = 30/34 (88%)
Frame = +1
Query: 256 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 357
EIIDFFLG SL +EVLK MPVQKQTRAGQ TRFK
Sbjct: 92 EIIDFFLGASLKNEVLKTMPVQKQTRAGQWTRFK 125
Score = 56.0 bits (129), Expect = 1e-06
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = +2
Query: 143 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKES 256
K + KEW+P TKLG LV++ KI LE IYLFSLPIK S
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGS 91
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 93.9 bits (223), Expect = 4e-18
Identities = 44/48 (91%), Positives = 45/48 (93%)
Frame = +1
Query: 256 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 399
EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD NGH+GL
Sbjct: 67 EIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGL 114
Score = 62.9 bits (146), Expect = 9e-09
Identities = 28/38 (73%), Positives = 32/38 (84%)
Frame = +2
Query: 143 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKES 256
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKES
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 66
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 93.1 bits (221), Expect = 7e-18
Identities = 47/83 (56%), Positives = 55/83 (66%)
Frame = +3
Query: 507 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 686
+PH VPC+VTG+CGS+ V LIPAPRGTG VSAPVP KLL MAG+ D +SA G T TLGN
Sbjct: 152 EPHMVPCRVTGRCGSLLVHLIPAPRGTGTVSAPVP-KLLMMAGIDDS-SSASGCTATLGN 209
Query: 687 FXXXXXXXXXXXXXXLTPDLWRD 755
F L PDL ++
Sbjct: 210 FTKAIFDTISKTHSYLIPDLQKE 232
Score = 56.0 bits (129), Expect = 1e-06
Identities = 32/67 (47%), Positives = 42/67 (62%)
Frame = +1
Query: 313 PVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYW 492
P+ KQT Q+TRFKA V +G + GH+ LG+K S EVA IILAKLS++PV
Sbjct: 95 PLIKQTCTDQQTRFKASVTVG-SYGHVSLGIKYSMEVA------IILAKLSIIPVETATG 147
Query: 493 GNKIGSH 513
G ++ H
Sbjct: 148 GKRLEPH 154
Score = 47.2 bits (107), Expect = 5e-04
Identities = 23/45 (51%), Positives = 29/45 (64%)
Frame = +2
Query: 152 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKESRSLISSSARP 286
+ +W+P+TKLG LV+E KI LE IY FSL + RSL S P
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWEHP 95
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 91.1 bits (216), Expect = 3e-17
Identities = 46/72 (63%), Positives = 51/72 (70%)
Frame = +3
Query: 474 SSKRLLG*QDRKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYT 653
S ++ LG + K H V CKVTG CGSV V LIPA RGTGI SAPVP K L MAG+ DCYT
Sbjct: 1 SVEKPLGNKIGKTHIVLCKVTGCCGSVLVHLIPAHRGTGISSAPVPTKPLMMAGIDDCYT 60
Query: 654 SARGSTGTLGNF 689
SARG T +L F
Sbjct: 61 SARGCTASLDYF 72
>UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2
protein - Homo sapiens (Human)
Length = 97
Score = 90.2 bits (214), Expect = 5e-17
Identities = 41/62 (66%), Positives = 44/62 (70%)
Frame = +3
Query: 570 PAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXXLTPDLW 749
PAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T TLGNF LTPDLW
Sbjct: 1 PAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLW 60
Query: 750 RD 755
++
Sbjct: 61 KE 62
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 86.6 bits (205), Expect = 6e-16
Identities = 43/81 (53%), Positives = 51/81 (62%)
Frame = +3
Query: 516 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXX 695
TV CKVTG+C SV + LIP R I+SAPVPKKLL +A + DCYTSARG T TL NF
Sbjct: 162 TVSCKVTGQCVSVLICLIPPTRN--IISAPVPKKLLLLANIDDCYTSARGCTATLDNFDK 219
Query: 696 XXXXXXXXXXXXLTPDLWRDI 758
LTP+LW+ +
Sbjct: 220 ATFNAISNTYSYLTPNLWKGL 240
Score = 55.6 bits (128), Expect = 1e-06
Identities = 34/64 (53%), Positives = 40/64 (62%)
Frame = +1
Query: 244 NQRIEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 423
N++ II FFL SL DE IMPVQ QT R FK FV+I D + H+ L KCSK+
Sbjct: 87 NKKSMIIGFFLRTSLRDE---IMPVQTQTWLPSRP-FKDFVSIRDYSSHVDLDDKCSKKT 142
Query: 424 ATAI 435
ATAI
Sbjct: 143 ATAI 146
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 82.2 bits (194), Expect = 1e-14
Identities = 40/58 (68%), Positives = 46/58 (79%)
Frame = +3
Query: 492 G*QDRKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARG 665
G + KPHTV CKVTG GSV++ LIPAPR T I SAP+PKKLL MAG+ DC+TSARG
Sbjct: 150 GSKTSKPHTVLCKVTGH-GSVSLHLIPAPRDTVISSAPMPKKLLMMAGINDCHTSARG 206
Score = 73.7 bits (173), Expect = 5e-12
Identities = 46/88 (52%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Frame = +1
Query: 256 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 435
EIID FLG +L DEVLK +P QK TR GQ +KA GD NGH+ G+ EVA I
Sbjct: 80 EIIDIFLGAALKDEVLKSLPEQKGTRVGQ--YYKA----GDYNGHVITGL---DEVANTI 130
Query: 436 RGAIILAKLSVLPVRRGYWGNKIGS-HT 516
+ IIL KL ++PV RGY G+K HT
Sbjct: 131 QRVIILTKLPIVPVWRGYCGSKTSKPHT 158
Score = 35.5 bits (78), Expect = 1.6
Identities = 18/30 (60%), Positives = 23/30 (76%)
Frame = +2
Query: 167 PVTKLGRLVREGKIDKLESIYLFSLPIKES 256
P +KLG LV++ +I L IYLFSLPIKE+
Sbjct: 51 PASKLGCLVKD-EIKSLGEIYLFSLPIKET 79
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 82.2 bits (194), Expect = 1e-14
Identities = 39/47 (82%), Positives = 42/47 (89%)
Frame = +1
Query: 256 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 396
EIIDFFLG SL DEVLKIMPV+K+TRAGQRTRFKAFVAI D NG+ G
Sbjct: 20 EIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDYNGYAG 66
Score = 54.4 bits (125), Expect = 3e-06
Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 7/176 (3%)
Frame = +2
Query: 203 KIDKLESIYLFSLPIKESRSL---ISSSARP*MMRF*--RSCLYRNKHVPDSAHVS-RHL 364
KI LE IYLFSLPIKES + + +S + +++ R + A V+ R
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDY 61
Query: 365 LPLATTTVILVWV*SAARKSPLPFEALLSLLSCLFYQFEEVTGVTRSEATHRPLQGHRQV 544
A +L R+ P +L C ++ + + G +A HRPLQG R +
Sbjct: 62 NGYAGRVEVLQ---GGGRRHPRGHHPDQAL-HC--HRAQRLLGEQDRQAPHRPLQGDRPL 115
Query: 545 WFCNSPADSCPSWYWNCVCASS*EASSDGWCTGLLHLSSWFNWHLGKFC*SHI-CC 709
C +W+ + + + EA+ D W LLHLS + H G+ H+ CC
Sbjct: 116 RLCAGALHPRAQGHWHRLSSCAQEAAHDSWYLRLLHLSQGLHCHPGQLRQRHLGCC 171
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 81.8 bits (193), Expect = 2e-14
Identities = 42/90 (46%), Positives = 62/90 (68%)
Frame = -1
Query: 507 SDLVTPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTC 328
+DLVTPV S++ N QL +D+S ++G G FLAAL QT++ V V +G++ LE L+GT
Sbjct: 27 TDLVTPVASTHRNNGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGLEARTLTGTG 86
Query: 327 LFLYRHDL*NLIIQGRAEEEINDLDSLIGK 238
L L HDL + ++Q A+EEI+DL+ G+
Sbjct: 87 LLLDGHDLQHFVLQRAAQEEIDDLELFNGQ 116
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 73.3 bits (172), Expect = 6e-12
Identities = 34/80 (42%), Positives = 55/80 (68%)
Frame = +1
Query: 247 QRIEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 426
+ +EI+D L P L+D+VL + +Q+ T +G+R RF +G+++G++GL + KEVA
Sbjct: 21 REVEIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLCVVGNSDGYVGLAICKGKEVA 79
Query: 427 TAIRGAIILAKLSVLPVRRG 486
+ IR AI AKL+++PV RG
Sbjct: 80 STIRKAIDKAKLNMIPVMRG 99
Score = 54.4 bits (125), Expect = 3e-06
Identities = 24/58 (41%), Positives = 38/58 (65%)
Frame = +3
Query: 516 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 689
+VP K+TG+ GS V L+PAP G G+V + +++L +AGV D ++ + G T T N+
Sbjct: 112 SVPLKITGRSGSTRVTLMPAPAGKGLVVSDYGRRVLTLAGVTDVWSRSAGQTRTTINY 169
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 73.3 bits (172), Expect = 6e-12
Identities = 38/88 (43%), Positives = 58/88 (65%)
Frame = +1
Query: 256 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 435
EI+D L P L ++VL + VQ+ ++G+R R++A V +G+ NG++G+G+ SKEV AI
Sbjct: 48 EIVDALL-PDLEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAI 106
Query: 436 RGAIILAKLSVLPVRRGYWGNKIGSHTP 519
R AI AKLS++ VR G + G +P
Sbjct: 107 RKAIAHAKLSLIKVRVGCGSWECGCGSP 134
Score = 67.7 bits (158), Expect = 3e-10
Identities = 30/60 (50%), Positives = 39/60 (65%)
Frame = +3
Query: 510 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 689
PH++P G CGSV V L+PAPRG G+V+ V K +L +AGV+D +T G T T NF
Sbjct: 134 PHSIPFTAKGACGSVKVELLPAPRGVGLVAGNVAKAVLGLAGVKDAWTKTFGDTRTTYNF 193
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 72.9 bits (171), Expect = 9e-12
Identities = 35/62 (56%), Positives = 43/62 (69%)
Frame = +3
Query: 504 RKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLG 683
R+PH+VP V GK GSV VRLIP PRG G+V V KK+L++AGVQD ++ G T T
Sbjct: 136 RRPHSVPFAVEGKEGSVRVRLIPGPRGLGLVIGDVGKKILRLAGVQDVWSQTFGETRTTV 195
Query: 684 NF 689
NF
Sbjct: 196 NF 197
Score = 64.9 bits (151), Expect = 2e-09
Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 4/81 (4%)
Frame = +1
Query: 256 EIIDFFLGPSLN----DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 423
EIID L P +N EVL I + T +G+R RF+ A+G+ +G++GLG+ KEV
Sbjct: 48 EIIDVLL-PEVNARENQEVLDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLGIGHGKEV 106
Query: 424 ATAIRGAIILAKLSVLPVRRG 486
AIR AI AKL+++ ++RG
Sbjct: 107 GIAIRKAINYAKLNIIEIKRG 127
Score = 34.7 bits (76), Expect = 2.8
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +2
Query: 158 EWVPVTKLGRLVREGKIDKLESIYLFSLPIKE 253
EW P TKLG +V+EG+I + I+ IKE
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIFRRGYQIKE 46
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 72.1 bits (169), Expect = 1e-11
Identities = 41/82 (50%), Positives = 46/82 (56%)
Frame = +3
Query: 507 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 686
KPHTV C+VT SV V I APRGT I+SAPVPKKLL+MA + D + ARG T L N
Sbjct: 76 KPHTVSCRVTRLYCSVLVHHISAPRGTDILSAPVPKKLLRMASIDDGDSLARGCTAILDN 135
Query: 687 FXXXXXXXXXXXXXXLTPDLWR 752
LT D WR
Sbjct: 136 -VIKATYDISKTYVSLTSDFWR 156
Score = 67.3 bits (157), Expect = 4e-10
Identities = 41/87 (47%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Frame = +1
Query: 265 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 444
D L ++ + ++I +K+T AGQ+TRFKAFV D NGH+ L EVATAIRGA
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGA 54
Query: 445 IILAKLSVLPVRRGYWGNKIGS-HTPS 522
IIL + S+ G+ GNKI HT S
Sbjct: 55 IILDRSSIAIAWGGWSGNKIAKPHTVS 81
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 72.1 bits (169), Expect = 1e-11
Identities = 33/62 (53%), Positives = 49/62 (79%)
Frame = +3
Query: 501 DRKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 680
D+K H+VP KV GK GSVT+ +IPAPRG G+V+ K+LL++AG++D +T+A+GST T+
Sbjct: 162 DQK-HSVPFKVKGKGGSVTIEIIPAPRGLGLVAGGKIKRLLELAGLKDAWTTAKGSTPTM 220
Query: 681 GN 686
+
Sbjct: 221 NS 222
Score = 62.1 bits (144), Expect = 2e-08
Identities = 31/69 (44%), Positives = 43/69 (62%)
Frame = +1
Query: 280 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 459
P L EV+ + +QK T GQ TRFKA VA G+ NG++G+G SK++ AI A A
Sbjct: 85 PDLKSEVVDVGIIQKMTSNGQSTRFKAIVATGNENGYLGIGQGKSKQMRIAIEKATNAAY 144
Query: 460 LSVLPVRRG 486
L+V P++ G
Sbjct: 145 LNVNPIKMG 153
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 71.7 bits (168), Expect = 2e-11
Identities = 36/61 (59%), Positives = 47/61 (77%)
Frame = +1
Query: 256 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 435
+I+D FL +L +E L I PVQKQT AGQ+TRFKA+V +GD++ HIGLG K +KEV AI
Sbjct: 96 QIVDHFL-KTLKEEPLAIGPVQKQTCAGQKTRFKAYVVVGDSHQHIGLGWKSAKEVQGAI 154
Query: 436 R 438
+
Sbjct: 155 Q 155
Score = 56.0 bits (129), Expect = 1e-06
Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 8/175 (4%)
Frame = +2
Query: 152 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKE----SRSLISSSARP*MMRF*RSCLY 319
++EWVP+TKLGRLV+ GKI LE+I+ FS+PIKE L + P + +
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQFSIPIKEYQIVDHFLKTLKEEPLAIGPVQKQTC 120
Query: 320 RNKHVPDSAHVSRHLLPLATTTVILVWV*SAARKSPLPFEALLSLLSCLFYQFE----EV 487
+ A+V ++ + + L W +A++ + L +L C QF+ +
Sbjct: 121 AGQKTRFKAYV---VVGDSHQHIGLGW--KSAKEVQGAIQELCNLNQCQ-TQFDSSQKRI 174
Query: 488 TGVTRSEATHRPLQGHRQVWFCNSPADSCPSWYWNCVCASS*EASSDGWCTGLLH 652
G TH P+Q R+ S S YW E ++GW LLH
Sbjct: 175 LGKQDRLTTHSPMQSDRKGRISQSQIGSSTQRYWYSCSHHIQEGLTNGWYPRLLH 229
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 71.3 bits (167), Expect = 3e-11
Identities = 32/87 (36%), Positives = 56/87 (64%)
Frame = +1
Query: 232 VFFTNQRIEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKC 411
+FF N ++ ++ G SL +V++ + V + T++G++ + K V +GD +GH+GLGVK
Sbjct: 92 IFFHNNKL--VNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHVGLGVKS 149
Query: 412 SKEVATAIRGAIILAKLSVLPVRRGYW 492
S + I+ A+ AKL++ +RRGYW
Sbjct: 150 SMDSKAGIKAALRKAKLAITKIRRGYW 176
Score = 66.5 bits (155), Expect = 7e-10
Identities = 30/84 (35%), Positives = 49/84 (58%)
Frame = +3
Query: 498 QDRKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 677
++ KP+T+ K +GK GSV V + PAP+GTGIV++ +L+++G++DC+T + G T +
Sbjct: 179 EEGKPNTIKYKTSGKAGSVVVCIKPAPKGTGIVASKFQLNVLKISGIRDCFTKSFGRTKS 238
Query: 678 LGNFXXXXXXXXXXXXXXLTPDLW 749
N +TPD W
Sbjct: 239 SFNTIKATFNALSSSYKFVTPDYW 262
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 70.9 bits (166), Expect = 3e-11
Identities = 37/57 (64%), Positives = 39/57 (68%)
Frame = +3
Query: 519 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 689
V KVT GSV V LIPAPRGTGIVSAPV K L AG+ +CY SAR T TL NF
Sbjct: 59 VQYKVTSHYGSVLVHLIPAPRGTGIVSAPVLTKFLMNAGIYNCYISARCYTATLYNF 115
Score = 66.1 bits (154), Expect = 1e-09
Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Frame = +1
Query: 319 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGN 498
QKQT+ GQ+ R K F GD NGH+GLG+KCSKEVATA +G + +L + R
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQLGETRLSRSTLVQ 60
Query: 499 -KIGSHTPSL 525
K+ SH S+
Sbjct: 61 YKVTSHYGSV 70
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 70.1 bits (164), Expect = 6e-11
Identities = 31/61 (50%), Positives = 43/61 (70%)
Frame = +3
Query: 507 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 686
+PH++P KV GK GSV V L+PAP+GTG+V V K LL AG++D +++ +G T T N
Sbjct: 130 EPHSLPFKVVGKAGSVEVDLLPAPKGTGLVVGSVLKTLLTYAGIKDAWSTTKGETRTTEN 189
Query: 687 F 689
F
Sbjct: 190 F 190
Score = 67.3 bits (157), Expect = 4e-10
Identities = 34/77 (44%), Positives = 53/77 (68%)
Frame = +1
Query: 256 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 435
EI+D L P L EV+ I VQKQT AG+ +R+K V +G+ +G++ +G +K++ AI
Sbjct: 45 EIVDVLL-PKLKYEVVDIKVVQKQTDAGEISRYKVLVIMGNMDGYVSIGTGKAKQLRVAI 103
Query: 436 RGAIILAKLSVLPVRRG 486
+ AI AK++++PVRRG
Sbjct: 104 QKAIRDAKMNIIPVRRG 120
Score = 37.1 bits (82), Expect = 0.52
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +2
Query: 155 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKE 253
+EW P T +G LV+EGKI ++ ++ +LPI E
Sbjct: 11 EEWKPRTSIGSLVKEGKISSIKELFDRNLPITE 43
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 69.3 bits (162), Expect = 1e-10
Identities = 37/83 (44%), Positives = 58/83 (69%)
Frame = -1
Query: 495 TPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTCLFLY 316
TPVTSS+W N QL D++ S+G+ +FL+ L+TQT++TV V N + LE+ +L+ + L L
Sbjct: 112 TPVTSSDWDNGQLGDDDTGSDGTSNFLSGLNTQTDVTVGVTNDDDSLESGSLTSSGLLLD 171
Query: 315 RHDL*NLIIQGRAEEEINDLDSL 247
R D+ N I+Q ++ +NDL+ L
Sbjct: 172 RLDVHNFILQ-VWQQLVNDLEFL 193
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 68.9 bits (161), Expect = 1e-10
Identities = 31/59 (52%), Positives = 46/59 (77%)
Frame = +3
Query: 501 DRKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 677
D+K H+VP KV GK GSV + ++PAPRG G+V+ ++LL++AG++D YT+A+GST T
Sbjct: 143 DQK-HSVPFKVRGKGGSVVIEILPAPRGLGLVAGGKIRRLLELAGLKDAYTTAKGSTPT 200
Score = 58.4 bits (135), Expect = 2e-07
Identities = 30/69 (43%), Positives = 43/69 (62%)
Frame = +1
Query: 280 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 459
P L EV+ + +QK T GQ TRFKA VA G+ NG++G+G +K++ AI A A
Sbjct: 66 PDLKTEVVDVGIIQKMTSNGQSTRFKAIVAAGNENGYLGIGQGKAKQMRIAIEKANNQAL 125
Query: 460 LSVLPVRRG 486
L+V P++ G
Sbjct: 126 LNVGPIKLG 134
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 65.3 bits (152), Expect = 2e-09
Identities = 33/74 (44%), Positives = 47/74 (63%)
Frame = +1
Query: 247 QRIEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 426
+ E+ DF LG L D+VLK+M VQKQ +AG+R RFK V I D N ++ LGV+ KE+
Sbjct: 150 KEFEVTDFLLGVPLKDKVLKLMFVQKQPKAGRRIRFKVIVTIRDCNDNVSLGVEWPKELL 209
Query: 427 TAIRGAIILAKLSV 468
A+ +L+ + V
Sbjct: 210 IAVCRTNVLSIILV 223
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 65.3 bits (152), Expect = 2e-09
Identities = 39/94 (41%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
Frame = +1
Query: 256 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 435
EI+D L P L DEVL I VQ+ T +G+R +F+ VA+G+ +G++G +V AI
Sbjct: 90 EIVDQLL-PGLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGYLGYAQARDDQVGGAI 148
Query: 436 RGAIILAKLSVLPVRR--GYWGNKIGSHTPSLAR 531
+ AI +AKL+++ V R G W ++ G T SL R
Sbjct: 149 QKAIDVAKLNIIEVDRGSGSWEDQPGG-TNSLTR 181
Score = 56.0 bits (129), Expect = 1e-06
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = +3
Query: 528 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 686
K GK GSVTV + PAP+G G+ +A + +L++AGV+D +T++ G+T T N
Sbjct: 182 KAEGKAGSVTVEIQPAPQGLGLAAAETVRNILELAGVEDAWTNSDGNTRTTVN 234
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 65.3 bits (152), Expect = 2e-09
Identities = 28/61 (45%), Positives = 40/61 (65%)
Frame = +3
Query: 507 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 686
+PHTV + GK GSV V L PAPRG G+ +K+L++AG++D +T + G+T T N
Sbjct: 124 RPHTVALRTEGKAGSVEVELQPAPRGLGLAGGETVRKVLELAGIEDIWTRSSGNTRTTVN 183
Query: 687 F 689
F
Sbjct: 184 F 184
Score = 61.7 bits (143), Expect = 2e-08
Identities = 34/88 (38%), Positives = 52/88 (59%)
Frame = +1
Query: 256 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 435
E++D + P L DEVL I VQ+ T +G+R +F+ VA+G+ +G IG +V AI
Sbjct: 39 EVVDQLV-PDLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGLIGYAEGRDDQVGGAI 97
Query: 436 RGAIILAKLSVLPVRRGYWGNKIGSHTP 519
+ AI +AKL+++ V RG + G P
Sbjct: 98 QKAIDIAKLNIIDVSRGCGSWECGCGRP 125
Score = 35.1 bits (77), Expect = 2.1
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 161 WVPVTKLGRLVREGKIDKLESIYLFSLPIKES 256
W P T+LG+ V EG+ID ++ LP+KES
Sbjct: 7 WEPRTRLGKQVVEGEIDSMQEALNSGLPLKES 38
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 64.5 bits (150), Expect = 3e-09
Identities = 31/88 (35%), Positives = 53/88 (60%)
Frame = +1
Query: 256 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 435
+I+D+ + P L DEV+ I Q+ T +G+R + +G+ NG++G+G +KE A AI
Sbjct: 37 QIVDYLI-PDLKDEVINIERAQRMTDSGRRMNYSITAVVGNGNGYVGVGRGKAKEAAPAI 95
Query: 436 RGAIILAKLSVLPVRRGYWGNKIGSHTP 519
+ AI AKL+++ ++RG + G P
Sbjct: 96 KKAIDNAKLNIIEIKRGCGSWECGCGKP 123
Score = 63.3 bits (147), Expect = 7e-09
Identities = 30/61 (49%), Positives = 39/61 (63%)
Frame = +3
Query: 507 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 686
KPHT+P V GK GSV+V L PAP+G G+ V K +L+MAG+ D + A G T T N
Sbjct: 122 KPHTLPFLVNGKSGSVSVTLKPAPQGVGLAVGDVVKVILRMAGIDDAWGFAAGHTKTTVN 181
Query: 687 F 689
+
Sbjct: 182 Y 182
Score = 34.7 bits (76), Expect = 2.8
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2
Query: 155 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKE 253
+EW P T+LGRLV G+I + LP+KE
Sbjct: 3 EEWTPRTELGRLVANGEIKTISEALHSKLPLKE 35
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 64.1 bits (149), Expect = 4e-09
Identities = 45/101 (44%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
Frame = +1
Query: 247 QRIEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 426
+ EI DFFL SL D+VLKI+P+ + R Q TRF +F I + GH G+GVKCSK+V
Sbjct: 21 KEFEINDFFLEASLKDKVLKIIPLSR-FRNDQWTRFNSFDTI-NYGGHNGIGVKCSKKVG 78
Query: 427 TAIRGAIILAKL-SVLPVRRGYWGNKIGSHTPSLARSPASV 546
TA+ + + L S LP R Y GN I T R+ S+
Sbjct: 79 TAVGLSSWSSFLSSCLP--RDYCGNNIRKPTYPCKRTGWSI 117
Score = 49.6 bits (113), Expect = 9e-05
Identities = 35/84 (41%), Positives = 43/84 (51%)
Frame = +3
Query: 504 RKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLG 683
RKP T PCK TG S++ L P IVS VP+KL+ A + CYTSAR T TLG
Sbjct: 104 RKP-TYPCKRTG--WSISF-LFPETLAF-IVSVLVPRKLMLRASIDSCYTSARSYTVTLG 158
Query: 684 NFXXXXXXXXXXXXXXLTPDLWRD 755
N TP+LW++
Sbjct: 159 NIAKATFDAVSKTSHS-TPNLWKE 181
>UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 208
Score = 61.7 bits (143), Expect = 2e-08
Identities = 32/60 (53%), Positives = 39/60 (65%)
Frame = -3
Query: 688 KFPKVPVEPRAEV*QSCTPAI*RSFLGTGADTIPVPRGAGISRTVTEPHLPVTLQGTVCG 509
K PKV V+P A V QS P+ FLGT A+ +PVP GAG+ T TEP P+TL G +CG
Sbjct: 12 KSPKVAVQPLAHVQQSSIPSSSSHFLGTEAEVMPVPMGAGMKSTRTEPQWPITLCG-LCG 70
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 58.4 bits (135), Expect = 2e-07
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +2
Query: 143 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 250
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 58.0 bits (134), Expect = 3e-07
Identities = 27/59 (45%), Positives = 39/59 (66%)
Frame = +3
Query: 510 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 686
PH++P +V GK GSV V L PAP+G GIV+ KK+ ++AG++D + + G T T N
Sbjct: 138 PHSIPYQVEGKSGSVRVILKPAPKGVGIVADDEIKKIFRLAGIKDVWVRSFGKTKTKMN 196
Score = 50.8 bits (116), Expect = 4e-05
Identities = 22/56 (39%), Positives = 36/56 (64%)
Frame = +1
Query: 319 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRG 486
QK+T G +TR++ +GD +GH+G+G+ S ++ A AI AKL+++ V RG
Sbjct: 72 QKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIKVARG 127
Score = 37.9 bits (84), Expect = 0.30
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +2
Query: 155 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKE 253
+EW P TKLGRLV+EGKI ++ I I+E
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEILSNKYVIRE 37
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 57.6 bits (133), Expect = 3e-07
Identities = 40/88 (45%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Frame = +1
Query: 256 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 435
+II+FFLG L DEVL+ M Q QRTR K F + + L V CSKEV TA
Sbjct: 51 DIIEFFLGEHLKDEVLRTMLAQ-----NQRTRIKVFFFLTIRSPMTTL-VNCSKEVGTAA 104
Query: 436 RGAIILAKLSVLPVRRGYWGNKIGS-HT 516
+ AI L + + GY GNKIG+ HT
Sbjct: 105 QRAITLLSF-LFSTQTGYKGNKIGNPHT 131
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/44 (56%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +3
Query: 510 PHTVPCKVTG-KCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGV 638
PHT+PC VT + V V L APRGTG VSA VPKKL +A +
Sbjct: 129 PHTIPCDVTATEKNLVLVCLTTAPRGTGTVSASVPKKLPLLASI 172
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 56.8 bits (131), Expect = 6e-07
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Frame = +1
Query: 277 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 456
GP ++VL++ + K + G+ F+A VA+GD NG IGLG +KEV A+ A + A
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEA 127
Query: 457 KLSVL--PVRRGY 489
K + + P+ + Y
Sbjct: 128 KKTAITVPITKDY 140
Score = 37.1 bits (82), Expect = 0.52
Identities = 17/60 (28%), Positives = 34/60 (56%)
Frame = +3
Query: 507 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 686
K +++P ++ + G+ +V + PA GTG+V+ + +L++AG Q+ G+ L N
Sbjct: 138 KDYSLPHRLDVEWGAASVMMKPASVGTGLVAGGAVRTILELAGYQNARGKQLGTDNALNN 197
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 54.8 bits (126), Expect = 2e-06
Identities = 30/69 (43%), Positives = 41/69 (59%)
Frame = +1
Query: 247 QRIEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 426
+ E+ DF L L D+VLK+M V+KQ AG+ RFK V I N ++ LGV+ KE+
Sbjct: 16 KEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYCNDNVSLGVERPKELL 75
Query: 427 TAIRGAIIL 453
A+ IIL
Sbjct: 76 IAVCRTIIL 84
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 52.8 bits (121), Expect = 1e-05
Identities = 25/64 (39%), Positives = 39/64 (60%)
Frame = +1
Query: 286 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 465
L + V+ + V K + G+R RF A V +GD NGH+G G ++EV AI+ A+ AK +
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKN 71
Query: 466 VLPV 477
++ V
Sbjct: 72 LISV 75
Score = 44.0 bits (99), Expect = 0.005
Identities = 20/51 (39%), Positives = 32/51 (62%)
Frame = +3
Query: 516 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 668
T+P ++ G+ GS V + PA GTG++S + +L++AGV D T + GS
Sbjct: 81 TIPHEIHGQFGSGNVLMKPAAEGTGVISGGPVRAILELAGVGDILTKSLGS 131
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 51.6 bits (118), Expect = 2e-05
Identities = 24/75 (32%), Positives = 45/75 (60%)
Frame = +1
Query: 253 IEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATA 432
++ DF G + + ++++ V K + G+ F+ IG+ NG +G+G + +EVATA
Sbjct: 502 VDADDFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATA 561
Query: 433 IRGAIILAKLSVLPV 477
++ A++ AK SV+ V
Sbjct: 562 VKRALVDAKKSVVRV 576
Score = 37.5 bits (83), Expect = 0.39
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +3
Query: 516 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 686
T+P +V K + ++PA GTG+++ + +L++AGVQ+ G L N
Sbjct: 583 TIPHRVEAKFNAARCVMVPAADGTGVLAGSSIRSVLELAGVQNVLAKRIGCRSLLNN 639
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 51.6 bits (118), Expect = 2e-05
Identities = 26/67 (38%), Positives = 40/67 (59%)
Frame = +1
Query: 283 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 462
+ + V+KI + K T+ G+ RF A V IGD NG +G G+ S EV AI+ AI A
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANN 107
Query: 463 SVLPVRR 483
+++ V++
Sbjct: 108 NLIKVKQ 114
Score = 47.6 bits (108), Expect = 4e-04
Identities = 21/69 (30%), Positives = 40/69 (57%)
Frame = +3
Query: 474 SSKRLLG*QDRKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYT 653
++ L+ + K ++ V G+ G+ V L+PAP GTGI++ + ++++AG D YT
Sbjct: 105 ANNNLIKVKQTKKGSIYHDVNGRHGAAKVMLLPAPEGTGIIAGGPVRAVVELAGFTDIYT 164
Query: 654 SARGSTGTL 680
+RG+ +
Sbjct: 165 KSRGANAPM 173
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 50.4 bits (115), Expect = 5e-05
Identities = 24/66 (36%), Positives = 37/66 (56%)
Frame = +1
Query: 280 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 459
P L ++V+KI + K + G R RF A V +GD G IG +KE+ AI+ A+ AK
Sbjct: 13 PLLEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAK 72
Query: 460 LSVLPV 477
++ +
Sbjct: 73 KQLVRI 78
Score = 35.5 bits (78), Expect = 1.6
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 516 TVPCKVTGKCGSVTVRLIPAPRGTGIVS-APVPKKLLQMAGVQDCYTSARGS 668
T+P G+ G+ L PA +GTGIV+ + +L++ G+ D T GS
Sbjct: 84 TIPHDTIGRFGASKFFLKPASKGTGIVAGGKAARTILELVGINDVLTKTFGS 135
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 49.6 bits (113), Expect = 9e-05
Identities = 19/54 (35%), Positives = 35/54 (64%)
Frame = +3
Query: 507 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 668
K +T+P ++ GK G+ T+ + PA GTG+++ +++L++ GV D T +GS
Sbjct: 75 KNNTIPHEIAGKWGATTLWMAPAYEGTGVIAGSASREILELVGVHDILTKIKGS 128
Score = 48.8 bits (111), Expect = 2e-04
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = +1
Query: 292 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 471
+++LKI V K T+ G+ F A+GD G IGLG+ + V AIR AI AK +++
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIV 70
Query: 472 PV 477
+
Sbjct: 71 KI 72
>UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 49.2 bits (112), Expect = 1e-04
Identities = 20/36 (55%), Positives = 29/36 (80%)
Frame = +3
Query: 582 GTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 689
G+ +V+ VPKK+L+ AG++D +TS+RGST TL NF
Sbjct: 2 GSSVVATRVPKKVLKFAGIEDVFTSSRGSTKTLSNF 37
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 49.2 bits (112), Expect = 1e-04
Identities = 23/65 (35%), Positives = 38/65 (58%)
Frame = +1
Query: 286 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 465
L ++++ + + K T+ G+ RF A IGD G++G G+ S EV AIR A+ AK +
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAKNN 137
Query: 466 VLPVR 480
+ V+
Sbjct: 138 MYKVK 142
Score = 40.7 bits (91), Expect = 0.042
Identities = 20/58 (34%), Positives = 34/58 (58%)
Frame = +3
Query: 507 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 680
K T+ +V GK G+ V + PAP+GTG+++ K +L++ G +D Y+ G +L
Sbjct: 145 KNFTLYHEVIGKHGAGKVLIKPAPKGTGVIAGGPIKVVLELCGFKDVYSKNLGKNTSL 202
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/62 (33%), Positives = 38/62 (61%)
Frame = +1
Query: 292 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 471
+++++I K T+ G+ F+ +G+ NG +GLG+ ++EV AIR AI AK +++
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIV 76
Query: 472 PV 477
V
Sbjct: 77 EV 78
Score = 42.7 bits (96), Expect = 0.010
Identities = 20/55 (36%), Positives = 34/55 (61%)
Frame = +3
Query: 516 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 680
T+P +V G+ + V L PA GTGI++ + ++++AG+Q+ T + GST L
Sbjct: 84 TIPHEVIGRQDASKVLLKPAAPGTGIIAGGTVRAVVELAGIQNILTKSLGSTNPL 138
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 48.4 bits (110), Expect = 2e-04
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Frame = +1
Query: 172 HQTRPSCSRRKNRQTREHLLVFFT--NQRIEIIDFFLGPSLNDEVLKIMPVQKQTRAGQR 345
++T + N QT+ F N+R + F ++V+ I V K T+ G+
Sbjct: 3 NKTEVVVAENANNQTQPERKKFDRKPNRRPQGPKQFQKDDFEEKVVTIRRVTKVTKGGRH 62
Query: 346 TRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 477
RF A V +GD G +GLG + EV AI+ A+ AK +++ V
Sbjct: 63 FRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVKEAKKNLIRV 106
Score = 39.5 bits (88), Expect = 0.097
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = +3
Query: 516 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARG 665
TVP +V G G+ V + PA GTG+++ + ++++AG+ D Y + G
Sbjct: 112 TVPHEVIGHFGAGQVLIKPAKPGTGVIAGGPARAVIELAGIADVYAKSLG 161
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 47.6 bits (108), Expect = 4e-04
Identities = 25/48 (52%), Positives = 31/48 (64%)
Frame = +1
Query: 256 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 399
+I+D L L +EV+ I VQKQT G+ R KA VAIGD+NGH L
Sbjct: 66 QIVDHLLS-RLKEEVMTIDQVQKQTSRGKEPRLKASVAIGDHNGHRAL 112
Score = 40.3 bits (90), Expect = 0.056
Identities = 16/29 (55%), Positives = 23/29 (79%)
Frame = +2
Query: 167 PVTKLGRLVREGKIDKLESIYLFSLPIKE 253
PVTKLGRLV++GK+ ++ I+ F + IKE
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIKE 64
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 47.6 bits (108), Expect = 4e-04
Identities = 25/66 (37%), Positives = 40/66 (60%)
Frame = +3
Query: 474 SSKRLLG*QDRKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYT 653
S+K+ L + K HT+P +V GK S V L P+ GTGI++ + +++ AG+QD T
Sbjct: 85 SAKKHLVKINFKGHTIPHEVIGKFKSARVILKPSTAGTGIIAGASVRSIVEKAGIQDVLT 144
Query: 654 SARGST 671
+ GS+
Sbjct: 145 KSWGSS 150
Score = 43.6 bits (98), Expect = 0.006
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = +1
Query: 289 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 468
+++V+KI V K + G+R F A +GD G +G+G + EV AIR +I AK +
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESAKKHL 90
Query: 469 LPV 477
+ +
Sbjct: 91 VKI 93
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 47.6 bits (108), Expect = 4e-04
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = +1
Query: 292 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 471
+++L + K + G+R RF A V +GD NG +G+G+ +KEV AI A +A+ +++
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVARKNMI 78
Query: 472 --PVRRG 486
PV G
Sbjct: 79 TVPVENG 85
Score = 39.5 bits (88), Expect = 0.097
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = +3
Query: 516 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 668
T+P ++ G+ + V L PA GTG+++ VP+ + ++AG+ + + GS
Sbjct: 86 TIPHEIVGENSTSRVLLKPAGPGTGVIAGTVPRSIAELAGITNMLSKELGS 136
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 47.2 bits (107), Expect = 5e-04
Identities = 19/62 (30%), Positives = 40/62 (64%)
Frame = +1
Query: 292 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 471
+ V+++ V K + G++ +F+A V +GD G++G+G +KEV A++ + I A+ +++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208
Query: 472 PV 477
V
Sbjct: 209 QV 210
Score = 40.7 bits (91), Expect = 0.042
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +3
Query: 507 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 686
K T P + G G+ V L PA GTG+++ + +L+MAGV++ GS L N
Sbjct: 214 KYSTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNN 273
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 46.0 bits (104), Expect = 0.001
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +1
Query: 292 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 444
+ ++KI V K T+ G++ F+A V IGD NG +G+GV +++V A + A
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKA 78
Score = 35.5 bits (78), Expect = 1.6
Identities = 17/69 (24%), Positives = 35/69 (50%)
Frame = +3
Query: 480 KRLLG*QDRKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSA 659
K L+ K ++P V G G+ + + P+ G+G+++ + +L++AG+++
Sbjct: 84 KNLIDVPITKSLSIPHAVIGDLGACKIIMRPSIEGSGVIAGGAVRTVLEVAGIKNVIAKQ 143
Query: 660 RGSTGTLGN 686
GS L N
Sbjct: 144 LGSDNLLNN 152
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/62 (30%), Positives = 38/62 (61%)
Frame = +1
Query: 292 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 471
+ V+++ V K + G++ F+A V +GD G +G+GV +KEV A++ + A+ +++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNII 245
Query: 472 PV 477
V
Sbjct: 246 TV 247
Score = 37.1 bits (82), Expect = 0.52
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +3
Query: 516 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 686
T P + G G+ V L PA GTG+++ + +L+MAGV++ S L N
Sbjct: 254 TFPHRADGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQIRSKNALNN 310
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 45.2 bits (102), Expect = 0.002
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +1
Query: 277 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 456
G L ++++ I V K + G+R F A V +GD G +G G ++EV AI A A
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAA 115
Query: 457 KLSVL--PVRRG 486
K +++ P+R G
Sbjct: 116 KKTMIRVPLREG 127
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 45.2 bits (102), Expect = 0.002
Identities = 26/69 (37%), Positives = 35/69 (50%)
Frame = +1
Query: 277 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 456
G L D V+ I V K + G+ F A V +GD NG +G+G S+EV AI + A
Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDA 101
Query: 457 KLSVLPVRR 483
K + V R
Sbjct: 102 KKHMFSVPR 110
Score = 34.7 bits (76), Expect = 2.8
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +3
Query: 516 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 668
T+ V G + TV L PA GTG+++ + +++ AG+ D T + GS
Sbjct: 114 TITHPVQGHDAAGTVLLRPAAPGTGVIAGGSVRAVMECAGITDVLTKSMGS 164
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 44.8 bits (101), Expect = 0.003
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = +2
Query: 161 WVPVTKLGRLVREGKIDKLESIYLFSLPIKE 253
W PVTKLGRLV++GK+ ++ I+ F + IKE
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEFGIKIKE 65
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 44.4 bits (100), Expect = 0.003
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +1
Query: 292 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 465
D+++ I V K + G+R F A V +GD G +G G ++EV AIR A AK L
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRDLI 83
Query: 466 VLPVRRG 486
+P+R G
Sbjct: 84 FVPLRGG 90
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 44.4 bits (100), Expect = 0.003
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = +3
Query: 516 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 671
TVP V G G+ + ++PA RGTG+V+ K + ++AG D T GST
Sbjct: 97 TVPHDVIGTFGATKIIVLPARRGTGVVAGGAAKPVFELAGYTDVLTKIIGST 148
Score = 43.2 bits (97), Expect = 0.008
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +1
Query: 286 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 465
L + ++ + T+ G+R F V +GD GH+G G +KEV AI I AK +
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKN 87
Query: 466 VLPV 477
V+ V
Sbjct: 88 VIRV 91
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 44.0 bits (99), Expect = 0.005
Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Frame = +1
Query: 292 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 471
+ V++I V K + G++ F+A + +GD NG +G+GV + +V A++ + A+ +++
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSDARKALI 127
Query: 472 PVRRGYWGNKIGS--HTPSLARSPASVVL 552
V NKI S H S + A+V L
Sbjct: 128 RVPL----NKINSIPHPMSGSSGAANVFL 152
Score = 41.9 bits (94), Expect = 0.018
Identities = 18/60 (30%), Positives = 35/60 (58%)
Frame = +3
Query: 507 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 686
K +++P ++G G+ V L PA GTG+++ + +L++AG+++ + GS L N
Sbjct: 133 KINSIPHPMSGSSGAANVFLKPASGGTGVIAGGAVRTVLELAGIKNVLAKSLGSKSPLNN 192
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 42.7 bits (96), Expect = 0.010
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +1
Query: 292 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 471
+ V+ I V K + G+R F A V +GD NG +G+G +KEV AI + A+ S
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFF 103
Query: 472 PV 477
V
Sbjct: 104 RV 105
Score = 35.5 bits (78), Expect = 1.6
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +3
Query: 516 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 680
T+ V G+ + V L PA GTG+++ + +L+ AGV D + GS +
Sbjct: 111 TITHPVQGEAAAGVVLLRPASPGTGVIAGGAARAVLECAGVHDILAKSLGSDNAI 165
>UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
pneumoniae
Length = 219
Score = 41.9 bits (94), Expect = 0.018
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +3
Query: 528 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARG 665
+V G+ G+ V L PAP+GTGI++ + ++++AG D YT G
Sbjct: 139 EVIGRSGASRVLLKPAPQGTGIIAGGAIRAIIELAGYSDIYTKNLG 184
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 41.1 bits (92), Expect = 0.032
Identities = 18/62 (29%), Positives = 35/62 (56%)
Frame = +1
Query: 292 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 471
+ V++I V K + G++ F+A V +G+ G +G+GV + +V A+R + K ++
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLI 78
Query: 472 PV 477
V
Sbjct: 79 EV 80
Score = 35.1 bits (77), Expect = 2.1
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +3
Query: 507 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 686
K +++ G G V + PA GTG+++ + +L++AGV++ GS L N
Sbjct: 84 KSNSITHITNGVSGGAKVVVRPAAPGTGVIAGGAVRTVLELAGVKNILAKQLGSNNPLNN 143
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 41.1 bits (92), Expect = 0.032
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +1
Query: 286 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 459
L ++++ I V K + G+R F A V +GD NG +G G+ + +V AIR + A+
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERAR 73
Score = 35.9 bits (79), Expect = 1.2
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +3
Query: 516 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 668
++P +V G G+ V L PA GTG+++ + +L+ AGV + T GS
Sbjct: 85 SIPHQVIGHYGAGRVFLRPASAGTGLIAGGPVRAVLEAAGVSNILTKCLGS 135
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 39.5 bits (88), Expect = 0.097
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +3
Query: 516 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 671
T+P +V K G V L PA GTG+++ + +L++AGV+D + G++
Sbjct: 84 TLPHEVEVKFGGARVLLRPASAGTGLIAGGAVRAILELAGVEDVLAKSLGAS 135
Score = 35.9 bits (79), Expect = 1.2
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 289 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 438
++ V+ I K + G+ F A V +GD G +G G + EV+ AIR
Sbjct: 16 DESVISINRSAKVVKGGKNFSFGALVVVGDRKGRVGYGYGKANEVSDAIR 65
>UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3;
Bacteria|Rep: 30S ribosomal protein S5 - Rhodopirellula
baltica
Length = 177
Score = 39.5 bits (88), Expect = 0.097
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +3
Query: 516 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 668
++P +V G+ G+ V LIPA GTGI++ + + + G+ D T + G+
Sbjct: 90 SIPHQVWGRYGAARVVLIPAGAGTGIIAGQAVRAVCEACGIHDILTKSYGT 140
>UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n=1;
Mus musculus|Rep: UPI000056598D UniRef100 entry - Mus
musculus
Length = 239
Score = 38.7 bits (86), Expect = 0.17
Identities = 29/84 (34%), Positives = 34/84 (40%), Gaps = 4/84 (4%)
Frame = +3
Query: 510 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM----AGVQDCYTSARGSTGT 677
P P ++ S+ LI AP T I+S VPK LL + A D SA G T
Sbjct: 141 PSVCPMQIRDYHSSMLACLITAP-STCIISGLVPKNLLLLLLLLASTDDRCISASGCTDA 199
Query: 678 LGNFXXXXXXXXXXXXXXLTPDLW 749
LG LTPDLW
Sbjct: 200 LGRLAKTTFDAISKTYSCLTPDLW 223
Score = 33.1 bits (72), Expect = 8.5
Identities = 34/109 (31%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Frame = +1
Query: 202 KNRQTREHLLVFFTNQRIEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 381
K + E L ++ + I F G SL D+++ + + + QRT+
Sbjct: 48 KIKSQEEVCLFCCPSKSLFTITDFPGESLKDDLMMASGLGSRLLSSQRTK---------- 97
Query: 382 NGHIGLGVKCSKEVATAIRGAIILAKL-SVLPVRRGYWGNKIGSHTPSL 525
GH GL CS EVATAI+ I + L S P+ R GN G PS+
Sbjct: 98 -GHSGLSSMCSGEVATAIQVLGITSYLGSPWPLCRE--GNMTGKSLPSV 143
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 38.7 bits (86), Expect = 0.17
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +3
Query: 516 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 668
TVP + K + V L PAP+G GI+++ + ++++AG D YT + GS
Sbjct: 159 TVPHEQWAKFLASKVMLKPAPKGKGIIASNSVRAVVELAGYTDIYTKSYGS 209
Score = 37.5 bits (83), Expect = 0.39
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Frame = +1
Query: 151 PERVGSCHQTRPSCSRRKNRQTREHLLVFFTNQRIEIIDFFLGPS--LNDEVLKIMPVQK 324
P+ G+ + T S KN + ++ TN + + P ++++ I V
Sbjct: 42 PDHKGTINTTPNDNSTSKNSKDKDFKFKKKTNSQNFKKNANKKPEKEFEEKIVNIARVTN 101
Query: 325 QTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 477
+ G+R F A V +GD G +G G + EV AI+ A+ A+ +++ V
Sbjct: 102 VVKGGRRFSFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAVKDAQNNLIRV 152
>UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGL123C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 76
Score = 38.3 bits (85), Expect = 0.23
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = -1
Query: 255 DSLIGKENK*MLSSLSIFPSRTRRPSLVTGTHSFWS 148
+SL GKE K + S + I P+ T PSLVTGTH F S
Sbjct: 18 NSLTGKECKKISSMVVILPALTNLPSLVTGTHPFSS 53
>UniRef50_UPI0000DA3DCA Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Rattus norvegicus
Length = 68
Score = 37.9 bits (84), Expect = 0.30
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = +3
Query: 579 RGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXXLTPDLWRD 755
RG + + + KKLL +A +QDCY AR + LGN+ LT DLW +
Sbjct: 6 RGRAVFTTVLKKKLL-LASIQDCYMIARVHSLMLGNYAKATFYVFSMTSNYLTFDLWTE 63
>UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 30S ribosomal
protein S5 - Neorickettsia sennetsu (strain Miyayama)
Length = 172
Score = 37.9 bits (84), Expect = 0.30
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +3
Query: 504 RKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 671
R+ T+ K G+ + + PAP GTGIV+ +K +M GV D + GS+
Sbjct: 77 REGRTIHHDCFSKLGASKLFIKPAPEGTGIVAGGAMRKFCEMLGVSDIIAKSYGSS 132
>UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00649.1 - Gibberella zeae PH-1
Length = 504
Score = 37.5 bits (83), Expect = 0.39
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +1
Query: 316 VQKQTRAGQRTRFKAFVAI-GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 483
V QTR G + R + VAI G+ NG +GLG+ S E A A +LA ++ PVRR
Sbjct: 350 VSNQTRLG-KVRSTSVVAIAGNGNGRLGLGMAKSTEPGVAEETAQMLAIRNMKPVRR 405
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 37.5 bits (83), Expect = 0.39
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +1
Query: 286 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 438
L ++V+ I K + G+R F A +GD NG +G+G + EV AI+
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIK 121
Score = 36.3 bits (80), Expect = 0.91
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +3
Query: 507 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 668
K T+P +V G V L PA GTG+++ + +L+ AGV++ T + GS
Sbjct: 137 KGDTIPHEVFGTHDGGKVLLRPAVTGTGLIAGGAVRAVLEAAGVKNVLTKSMGS 190
>UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 414
Score = 37.5 bits (83), Expect = 0.39
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +1
Query: 286 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 465
L ++L V QTR G+ + +G+ NG IGLG S + A+ A ++A +
Sbjct: 250 LRHKILVQRFVTNQTRLGKVQSWHIMTIVGNGNGRIGLGEAKSVDGQIAMHKARLMAIKN 309
Query: 466 VLPVRR 483
++P+RR
Sbjct: 310 MVPIRR 315
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 37.1 bits (82), Expect = 0.52
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -1
Query: 447 NSASNGSGDFLAALHTQTNMTVVVANGNKCLET 349
NS ++ +FL T+TNMT+ V+N NKC ET
Sbjct: 25 NSFTDSIWNFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 37.1 bits (82), Expect = 0.52
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 286 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 438
L ++VL + K + G++ F A + +GD G +G G + E+ AIR
Sbjct: 13 LEEKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYGFAKANELTDAIR 63
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 36.7 bits (81), Expect = 0.69
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +1
Query: 286 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 465
L ++++ + V K + G+ F A +GD G +G+G S+EV A++ A+ A+
Sbjct: 21 LKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPLAVQKAMDEARQR 80
Query: 466 VLPV 477
++ V
Sbjct: 81 MVRV 84
Score = 33.1 bits (72), Expect = 8.5
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +3
Query: 516 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 671
T+ V G+ G+ V + PA GTGI++ + + ++ GV + GST
Sbjct: 90 TLHHSVIGRHGAARVYMQPASEGTGIIAGGPMRAIFEVMGVHNILAKCLGST 141
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 35.9 bits (79), Expect = 1.2
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +1
Query: 298 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 477
++ + V K + G+R F V IGD G +G G+ EV+ A A+ A+ +++ V
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEVSEAKVKAVNAARKNMIRV 79
>UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1;
Neurospora crassa|Rep: Related to ribosomal protein S5 -
Neurospora crassa
Length = 477
Score = 35.5 bits (78), Expect = 1.6
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +1
Query: 316 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 483
V QTR G+ V G+ +G +GLG+ S E + A+ A +LA ++ P+ R
Sbjct: 323 VVNQTRLGKIASDSVMVIAGNGDGWLGLGMAKSVEASIAVEKATLLAIQNMQPIPR 378
>UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 407
Score = 35.5 bits (78), Expect = 1.6
Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 2/141 (1%)
Frame = +1
Query: 283 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 462
+L+ + L V QTR G+ + +G+ NG +G+G S E + A A +LA
Sbjct: 242 NLHSKQLVQRRVANQTRLGKVQKASIMYVVGNGNGWLGIGEAKSTEPSIAGLKARLLAIR 301
Query: 463 SVLPVRRGYWGNKIGSHTPSLARSPASVVL*QSG*FLPLV--VLELCLRQFLRSFFRWLV 636
++ P+RR GS T ++ + + G L + + E+C ++ +
Sbjct: 302 NMRPIRRYEDRTIYGSVTAKVSGTVVKMNARPPGFGLRVSHRIFEMCRAAGIQDLAA-NI 360
Query: 637 YRTATPQLVVQLAPWEILLKP 699
R+ P V+ A W + +P
Sbjct: 361 PRSRNPMNTVKAAYWALCNQP 381
>UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 148
Score = 34.7 bits (76), Expect = 2.8
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +3
Query: 513 HTVPCKVTGK-CGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 668
HT+ +V GK C ++ V ++PAP G GIV+ + + +AG+++ GS
Sbjct: 69 HTIYHEVRGKYCKTICV-MLPAPSGDGIVANDTVEAICTLAGIKNIKAKIHGS 120
>UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium
falciparum|Rep: Rps5 protein - Plasmodium falciparum
Length = 239
Score = 34.7 bits (76), Expect = 2.8
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = +1
Query: 274 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 453
L ++ +++++I + + G+ R+K + +G+ G IGLGV SK + I AII
Sbjct: 94 LNNNIIEKIIEIKKISYTIKKGRIRRYKIVLVLGNKQGWIGLGV--SKNI--NINKAIIS 149
Query: 454 AKLSVL 471
AK+ L
Sbjct: 150 AKIKAL 155
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 34.7 bits (76), Expect = 2.8
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 271 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAI 435
++ L + L + V QT G+ F A V +GD NG +GLG K +E++ AI
Sbjct: 139 YITRKLTMKPLVMKRVSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSREEMSKAI 194
>UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4;
Rickettsiales|Rep: 30S ribosomal protein S5 -
Pelagibacter ubique
Length = 170
Score = 34.7 bits (76), Expect = 2.8
Identities = 16/56 (28%), Positives = 32/56 (57%)
Frame = +3
Query: 504 RKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 671
R+ T+ V GK G+ + L AP+GTGI++ + + ++ G++D + G++
Sbjct: 77 REGRTIHHDVYGKDGAGKIILRSAPKGTGIIAGGPVRAVCEVLGIKDIVAKSMGTS 132
>UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondrial
ribosome structure: Pubmed 11279123. precursor; n=9;
Eurotiomycetidae|Rep: Remark: literature about the
mitochondrial ribosome structure: Pubmed 11279123.
precursor - Aspergillus niger
Length = 444
Score = 34.3 bits (75), Expect = 3.7
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +1
Query: 283 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 462
SL + L I V QTR G+ G+ NG +G+G+ S E+ A + A A
Sbjct: 254 SLYIKDLVIRRVSNQTRLGKVPSMSVVTVAGNQNGLMGIGIAKSDEIIDACQQARARAVK 313
Query: 463 SVLPVRR 483
++ PV R
Sbjct: 314 NMQPVPR 320
>UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 172
Score = 33.9 bits (74), Expect = 4.8
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 516 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 671
T+P + G +V L PA GTG+ + + +L GV D ++GS+
Sbjct: 85 TIPHEQAASYGGASVFLKPATTGTGVKAGGAMRAVLDSVGVTDVLAKSKGSS 136
>UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n=5;
Bacteria|Rep: Ribosomal protein S2-related protein -
Deinococcus radiodurans
Length = 472
Score = 33.1 bits (72), Expect = 8.5
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +1
Query: 355 KAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG 507
++ V IG + H G + +++VA A+RG + L V GYW + G
Sbjct: 2 RSLVLIGHGSHHHGESARATQQVAEALRGRGLAGHLPYDEVLEGYWQQEPG 52
>UniRef50_Q9MTD9 Cluster: Ribosomal protein S5; n=1; Toxoplasma
gondii|Rep: Ribosomal protein S5 - Toxoplasma gondii
Length = 268
Score = 33.1 bits (72), Expect = 8.5
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = +1
Query: 226 LLVFFTNQRIEIIDFFLGPSLN---DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 396
LL+F N + ++ F+ N ++++I + K + G+ RFK + IG N IG
Sbjct: 110 LLIF--NYNLFLLFFYKTNKYNKILQKIIEIKKISKTKQKGRIRRFKVLLLIGAKNAWIG 167
Query: 397 LGVKCSKEVATAIRGAIILA 456
+GV + AI A A
Sbjct: 168 IGVSKDFYLQEAINKARFFA 187
>UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 270
Score = 33.1 bits (72), Expect = 8.5
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1
Query: 298 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 444
V+++ V T G++ +A V +G+ NG G GV + +AIR A
Sbjct: 156 VVELRRVSNVTSGGKKRSLRALVVVGNRNGAAGFGVGKGRTPISAIRKA 204
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 821,810,342
Number of Sequences: 1657284
Number of extensions: 17975886
Number of successful extensions: 50875
Number of sequences better than 10.0: 90
Number of HSP's better than 10.0 without gapping: 47686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50715
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69554636255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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