Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10574
(658 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN full... 160 2e-38
UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93; Eukaryo... 160 2e-38
UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82; Eukaryo... 138 1e-31
UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8; Euteleostomi... 128 1e-28
UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21; Eukaryo... 127 3e-28
UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4; Eukaryot... 126 6e-28
UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces ... 113 3e-24
UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19; Eukaryo... 107 2e-22
UniRef50_UPI000049933B Cluster: conserved hypothetical protein; ... 106 5e-22
UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;... 88 2e-16
UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamb... 81 2e-14
UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillard... 74 3e-12
UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whol... 73 5e-12
UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitoz... 73 8e-12
UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma j... 65 1e-09
UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7; Archaea... 65 2e-09
UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella... 61 2e-08
UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5; Archaea... 56 6e-07
UniRef50_Q9HJD0 Cluster: 30S ribosomal protein S8e; n=5; Euryarc... 55 1e-06
UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole gen... 49 1e-04
UniRef50_Q0W1L5 Cluster: 30S ribosomal protein S8e; n=3; Euryarc... 48 2e-04
UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1; Methano... 48 3e-04
UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6; Archaea... 46 0.001
UniRef50_Q980W3 Cluster: 30S ribosomal protein S8e; n=4; Archaea... 45 0.002
UniRef50_A0RXG5 Cluster: Ribosomal protein S8E; n=2; Thermoprote... 41 0.030
UniRef50_Q9YDY0 Cluster: 30S ribosomal protein S8e; n=3; Desulfu... 41 0.030
UniRef50_P61300 Cluster: 30S ribosomal protein S8e; n=5; Methano... 38 0.16
UniRef50_Q2W531 Cluster: TPR repeat; n=3; Magnetospirillum|Rep: ... 37 0.49
UniRef50_Q8ZTB8 Cluster: 30S ribosomal protein S8e; n=6; Archaea... 36 0.65
UniRef50_UPI0000DB7956 Cluster: PREDICTED: similar to Deformed C... 35 2.0
UniRef50_A7D873 Cluster: Exodeoxyribonuclease III Xth; n=2; Meth... 35 2.0
UniRef50_Q2NEU6 Cluster: 30S ribosomal protein S8e; n=1; Methano... 35 2.0
UniRef50_UPI0000F32D0C Cluster: Zinc finger CCCH domain-containi... 34 2.6
UniRef50_A7F1W3 Cluster: Putative uncharacterized protein; n=1; ... 33 4.6
UniRef50_UPI0000F2B19F Cluster: PREDICTED: hypothetical protein;... 33 6.0
UniRef50_Q9VL72 Cluster: CG5899-PA, isoform A; n=5; Diptera|Rep:... 33 6.0
UniRef50_Q8TN82 Cluster: Predicted protein; n=1; Methanosarcina ... 33 6.0
UniRef50_UPI0000DD7BBA Cluster: PREDICTED: hypothetical protein;... 33 8.0
UniRef50_Q89D60 Cluster: Blr7583 protein; n=1; Bradyrhizobium ja... 33 8.0
UniRef50_Q9VAU6 Cluster: CG9986-PA; n=5; Diptera|Rep: CG9986-PA ... 33 8.0
UniRef50_A5E7M6 Cluster: Putative uncharacterized protein; n=1; ... 33 8.0
>UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence; n=9;
Deuterostomia|Rep: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence - Mus
musculus (Mouse)
Length = 152
Score = 160 bits (389), Expect = 2e-38
Identities = 71/84 (84%), Positives = 76/84 (90%)
Frame = +2
Query: 2 GISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLD 181
GISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD
Sbjct: 2 GISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLD 61
Query: 182 TGNFSWGSECSTRKTRIIDVVYNA 253
GNFSWGSEC TRKTRIIDVVYNA
Sbjct: 62 VGNFSWGSECCTRKTRIIDVVYNA 85
Score = 111 bits (266), Expect = 2e-23
Identities = 49/63 (77%), Positives = 56/63 (88%)
Frame = +1
Query: 256 NNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTA 435
NNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K
Sbjct: 87 NNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQ 146
Query: 436 RKY 444
+KY
Sbjct: 147 KKY 149
>UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93;
Eukaryota|Rep: 40S ribosomal protein S8 - Homo sapiens
(Human)
Length = 208
Score = 160 bits (389), Expect = 2e-38
Identities = 71/84 (84%), Positives = 76/84 (90%)
Frame = +2
Query: 2 GISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLD 181
GISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD
Sbjct: 2 GISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLD 61
Query: 182 TGNFSWGSECSTRKTRIIDVVYNA 253
GNFSWGSEC TRKTRIIDVVYNA
Sbjct: 62 VGNFSWGSECCTRKTRIIDVVYNA 85
Score = 128 bits (309), Expect = 1e-28
Identities = 58/84 (69%), Positives = 69/84 (82%)
Frame = +1
Query: 256 NNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTA 435
NNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K
Sbjct: 87 NNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQ 146
Query: 436 RKYLARQRLAKVEGALEEQFHTGR 507
+KY R++ AK+ LEEQF G+
Sbjct: 147 KKYDERKKNAKISSLLEEQFQQGK 170
Score = 77.0 bits (181), Expect = 4e-13
Identities = 32/38 (84%), Positives = 37/38 (97%)
Frame = +3
Query: 501 GALLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 614
G LLAC+ASRPGQCGRADGY+LEGKELEFYLRKIK+++
Sbjct: 169 GKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARK 206
>UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82;
Eukaryota|Rep: 40S ribosomal protein S8 - Drosophila
melanogaster (Fruit fly)
Length = 208
Score = 138 bits (333), Expect = 1e-31
Identities = 64/84 (76%), Positives = 71/84 (84%)
Frame = +2
Query: 2 GISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLD 181
GISRD HKRRATGGKR +RKKRK+ELGRPAANT+LG R+H VR+RGGNTK RALRL+
Sbjct: 2 GISRDSAHKRRATGGKRKSLRKKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRLE 61
Query: 182 TGNFSWGSECSTRKTRIIDVVYNA 253
TGNF+W SE RKTRI DVVYNA
Sbjct: 62 TGNFAWASEGVARKTRIADVVYNA 85
Score = 121 bits (291), Expect = 2e-26
Identities = 56/86 (65%), Positives = 69/86 (80%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 NNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEA--IINKKRSQK 429
NNELVRTKTLVKN+IVV+DATPFRQWYE+HY LPLGRK+ K + E+ ++ KKRS+K
Sbjct: 87 NNELVRTKTLVKNSIVVIDATPFRQWYEAHYVLPLGRKRNPKHAQKEDENDVLTKKRSEK 146
Query: 430 TARKYLARQRLAKVEGALEEQFHTGR 507
+KYL RQ+ KVE ALE+QF +GR
Sbjct: 147 VMKKYLERQKYGKVEQALEDQFTSGR 172
Score = 75.4 bits (177), Expect = 1e-12
Identities = 31/38 (81%), Positives = 37/38 (97%)
Frame = +3
Query: 501 GALLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 614
G +LAC++SRPGQCGR+DGYILEGKELEFYL+KIKSK+
Sbjct: 171 GRILACISSRPGQCGRSDGYILEGKELEFYLKKIKSKK 208
>UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8;
Euteleostomi|Rep: Ribosomal protein S8 - Homo sapiens
(Human)
Length = 188
Score = 128 bits (309), Expect = 1e-28
Identities = 58/84 (69%), Positives = 69/84 (82%)
Frame = +1
Query: 256 NNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTA 435
NNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K
Sbjct: 67 NNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQ 126
Query: 436 RKYLARQRLAKVEGALEEQFHTGR 507
+KY R++ AK+ LEEQF G+
Sbjct: 127 KKYDERKKNAKISSLLEEQFQQGK 150
Score = 100 bits (239), Expect = 4e-20
Identities = 54/84 (64%), Positives = 59/84 (70%)
Frame = +2
Query: 2 GISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLD 181
GISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGG
Sbjct: 2 GISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGG---------- 51
Query: 182 TGNFSWGSECSTRKTRIIDVVYNA 253
C TRKTRIIDVVYNA
Sbjct: 52 ---------C-TRKTRIIDVVYNA 65
Score = 77.0 bits (181), Expect = 4e-13
Identities = 32/38 (84%), Positives = 37/38 (97%)
Frame = +3
Query: 501 GALLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 614
G LLAC+ASRPGQCGRADGY+LEGKELEFYLRKIK+++
Sbjct: 149 GKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARK 186
>UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21;
Eukaryota|Rep: 40S ribosomal protein S8 - Zea mays
(Maize)
Length = 221
Score = 127 bits (306), Expect = 3e-28
Identities = 61/85 (71%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 GISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRL 178
GISRD HKRRATGGK+ RKKRKYELGR ANT+L + + VR RGGN K+RALRL
Sbjct: 2 GISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRL 61
Query: 179 DTGNFSWGSECSTRKTRIIDVVYNA 253
DTGN+SWGSE TRKTRI+DVVYNA
Sbjct: 62 DTGNYSWGSEAVTRKTRILDVVYNA 86
Score = 77.0 bits (181), Expect = 4e-13
Identities = 43/92 (46%), Positives = 56/92 (60%), Gaps = 8/92 (8%)
Frame = +1
Query: 256 NNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKK--------GAKLTEAEEAIIN 411
NNELVRT+TLVK+AIV VDA PF+QWY +HY + +GRKK A+ E E A
Sbjct: 88 NNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKTPAAKKDNAEGQEVEAAAEE 147
Query: 412 KKRSQKTARKYLARQRLAKVEGALEEQFHTGR 507
K+S RK R+ ++ +EEQF +GR
Sbjct: 148 TKKSNHVTRKLEKRKEGRTLDPHIEEQFGSGR 179
Score = 72.5 bits (170), Expect = 8e-12
Identities = 29/41 (70%), Positives = 37/41 (90%)
Frame = +3
Query: 501 GALLACVASRPGQCGRADGYILEGKELEFYLRKIKSKRANN 623
G LLAC++SRPGQCGRADGYILEGKELEFY++K++ K+ +
Sbjct: 178 GRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKS 218
>UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4;
Eukaryota|Rep: 40S ribosomal protein S8 - Theileria
parva
Length = 188
Score = 126 bits (303), Expect = 6e-28
Identities = 57/84 (67%), Positives = 69/84 (82%)
Frame = +2
Query: 2 GISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLD 181
GISRD HKRR TGG+ +KKRKYELGRP++NT+LG + + VR RGGN K+RALRLD
Sbjct: 2 GISRDSRHKRRLTGGRYPVHKKKRKYELGRPSSNTKLGSKLVRKVRCRGGNLKFRALRLD 61
Query: 182 TGNFSWGSECSTRKTRIIDVVYNA 253
+GNFSWGS+ TRKTR++DVVYNA
Sbjct: 62 SGNFSWGSQNVTRKTRVMDVVYNA 85
Score = 64.1 bits (149), Expect = 3e-09
Identities = 25/38 (65%), Positives = 32/38 (84%)
Frame = +3
Query: 501 GALLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 614
G LLAC++SRPGQCGR DGY+LEG+EL FY R++ K+
Sbjct: 149 GRLLACISSRPGQCGRCDGYVLEGEELNFYRRRMDKKK 186
Score = 61.3 bits (142), Expect = 2e-08
Identities = 26/37 (70%), Positives = 32/37 (86%)
Frame = +1
Query: 256 NNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGR 366
+NELVRTKTLVKNAIV VD TPF+ W+++HY L LG+
Sbjct: 87 SNELVRTKTLVKNAIVTVDPTPFKLWFKTHYGLELGK 123
>UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces
capsulatus NAm1|Rep: Ribosomal protein S8 - Ajellomyces
capsulatus NAm1
Length = 141
Score = 113 bits (273), Expect = 3e-24
Identities = 53/80 (66%), Positives = 62/80 (77%)
Frame = +2
Query: 2 GISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLD 181
GISRD HKR ATG KR+ RKKR +E GR ANTR+GP+RIH VR+RGGN K+R LRL+
Sbjct: 2 GISRDSRHKRSATGAKRSHYRKKRAFEKGRQPANTRIGPKRIHLVRTRGGNQKFRGLRLE 61
Query: 182 TGNFSWGSECSTRKTRIIDV 241
+GNFSWGSE RK R+I V
Sbjct: 62 SGNFSWGSEGIARKVRVIVV 81
Score = 52.8 bits (121), Expect = 7e-06
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = +3
Query: 501 GALLACVASRPGQCGRADGYILEGKELEFYLRKIK 605
G L A V+SRPGQ GR DGYILEG+EL FY R I+
Sbjct: 106 GRLYAVVSSRPGQSGRVDGYILEGEELAFYQRAIR 140
>UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19;
Eukaryota|Rep: 40S ribosomal protein S8 - Leishmania
major
Length = 220
Score = 107 bits (257), Expect = 2e-22
Identities = 51/84 (60%), Positives = 60/84 (71%)
Frame = +2
Query: 2 GISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLD 181
GI R HKR+ TGGK RK+ K ELGR ANTRLG +R+ VR+RGGN K RALRLD
Sbjct: 2 GIVRSRLHKRKITGGKTKIHRKRMKAELGRLPANTRLGARRVSPVRARGGNFKIRALRLD 61
Query: 182 TGNFSWGSECSTRKTRIIDVVYNA 253
TGNF+W SE + R++DVVYNA
Sbjct: 62 TGNFAWASEAIAHRVRLLDVVYNA 85
Score = 67.7 bits (158), Expect = 2e-10
Identities = 43/97 (44%), Positives = 54/97 (55%), Gaps = 13/97 (13%)
Frame = +1
Query: 256 NNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPL-GRKKGAKLTEAEE--------AII 408
+NELVRTKTLVKN IV VDA PF++WY HY + L KK K A E A
Sbjct: 87 SNELVRTKTLVKNCIVAVDAAPFKRWYAKHYGIDLDADKKSTKAAVAAEKKGRKSAHAAA 146
Query: 409 NK----KRSQKTARKYLARQRLAKVEGALEEQFHTGR 507
+K K S K R++ R+R +VE A+ +Q GR
Sbjct: 147 DKYDVNKASPKLQREWTRRRRNHRVEKAIADQLREGR 183
Score = 54.0 bits (124), Expect = 3e-06
Identities = 22/38 (57%), Positives = 31/38 (81%)
Frame = +3
Query: 501 GALLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 614
G +LA + SRPGQ GRADG +LEG EL+FYL++++ K+
Sbjct: 182 GRVLARITSRPGQSGRADGILLEGAELQFYLKRLEKKK 219
>UniRef50_UPI000049933B Cluster: conserved hypothetical protein;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 237
Score = 106 bits (254), Expect = 5e-22
Identities = 50/84 (59%), Positives = 63/84 (75%)
Frame = +2
Query: 2 GISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLD 181
GI+RD HKRRATGGK+ ++KK+K +GR ANTRLG R+H VR R G K RALRL+
Sbjct: 2 GITRDSRHKRRATGGKKNSMQKKKKNTMGRQPANTRLGAIRVHDVRCRYGIIKRRALRLE 61
Query: 182 TGNFSWGSECSTRKTRIIDVVYNA 253
GNFSW S+ T+ T+I++VVYNA
Sbjct: 62 NGNFSWASQSITKGTKILNVVYNA 85
Score = 59.3 bits (137), Expect = 8e-08
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +3
Query: 501 GALLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 614
G +LAC++SRPGQ G +GYILEGKEL+FY +KI K+
Sbjct: 199 GRVLACISSRPGQTGSVEGYILEGKELDFYSKKISDKK 236
Score = 42.3 bits (95), Expect = 0.010
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Frame = +1
Query: 256 NNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKK----RS 423
+N+ VRT TLVK AI+ +D PFR W+ Y + K E+ KK +
Sbjct: 87 DNDFVRTNTLVKGAIIEIDPAPFRLWFLKFYGKDIASTDYYKSLESATFKTEKKVVVPKE 146
Query: 424 QKTARKYLARQRLAKVEGAL 483
++ K +A Q++A+ + AL
Sbjct: 147 EENKEKTIA-QQIAETQVAL 165
>UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;
Zea mays|Rep: Putative 40S ribosomal protein S8 - Zea
mays (Maize)
Length = 245
Score = 88.2 bits (209), Expect = 2e-16
Identities = 42/71 (59%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Frame = +2
Query: 44 GKRAPIRKKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSWGSECSTR 220
G P+++++ YELGR ANT+L + + VR RGGNTK+RALR DT N+SWGSE TR
Sbjct: 113 GPFCPLQEEQGYELGRQPANTKLSSNKTVRRVRVRGGNTKWRALRFDTCNYSWGSEALTR 172
Query: 221 KTRIIDVVYNA 253
KTRI+DVVY A
Sbjct: 173 KTRILDVVYIA 183
Score = 66.1 bits (154), Expect = 7e-10
Identities = 28/48 (58%), Positives = 38/48 (79%)
Frame = +1
Query: 256 NNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEE 399
NNELVRT+TLVK+AIV VDA PF+QWY +HY + +GRKK + + ++
Sbjct: 185 NNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKVSVAKKDD 232
>UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamblia
ATCC 50803|Rep: Ribosomal protein S8 - Giardia lamblia
ATCC 50803
Length = 174
Score = 81.4 bits (192), Expect = 2e-14
Identities = 44/93 (47%), Positives = 56/93 (60%), Gaps = 9/93 (9%)
Frame = +2
Query: 2 GISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRL---------GPQRIHSVRSRGGN 154
GI+ D +KR TG + KKRKY LGR ANT+L Q+I ++R RGGN
Sbjct: 2 GITHDKMYKRSKTGAVQGKWHKKRKYNLGRQPANTKLIVKVTSKKNEGQKISTIRCRGGN 61
Query: 155 TKYRALRLDTGNFSWGSECSTRKTRIIDVVYNA 253
K RALRL G+F+WGS + K RI+ VVYN+
Sbjct: 62 IKRRALRLSHGSFAWGSADISHKARILQVVYNS 94
Score = 49.2 bits (112), Expect = 9e-05
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = +3
Query: 507 LLACVASRPGQCGRADGYILEGKELEFYLRKIKSK 611
+LA ++SRPGQ G ADGYILEG EL FY +K+ K
Sbjct: 140 ILARISSRPGQVGTADGYILEGPELLFYQKKLAPK 174
Score = 35.5 bits (78), Expect = 1.1
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +1
Query: 256 NNELVRTKTLVKNAIVVVDATPFR 327
+NELVRT TLVK +V +D+ PF+
Sbjct: 96 SNELVRTNTLVKGCVVQIDSAPFK 119
>UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillardia
theta|Rep: 40S ribosomal protein S8 - Guillardia theta
(Cryptomonas phi)
Length = 178
Score = 74.1 bits (174), Expect = 3e-12
Identities = 37/83 (44%), Positives = 54/83 (65%)
Frame = +2
Query: 2 GISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLD 181
GI+R+ HKR++TGG ++ RKKR + GR +NT++G + + +R RGG K RAL L
Sbjct: 2 GINREGLHKRKSTGGLKSCWRKKRNHAKGRQPSNTKIGRRCVVKLRVRGGGVKTRALFLS 61
Query: 182 TGNFSWGSECSTRKTRIIDVVYN 250
GNFS+ S T K +I+ V +N
Sbjct: 62 YGNFSFVSIQRTFKAKILSVAFN 84
Score = 57.6 bits (133), Expect = 2e-07
Identities = 24/37 (64%), Positives = 32/37 (86%)
Frame = +3
Query: 501 GALLACVASRPGQCGRADGYILEGKELEFYLRKIKSK 611
G +LA + SRPGQ GRADGYILEG+EL+++L+KI+ K
Sbjct: 142 GKILARICSRPGQSGRADGYILEGQELDYFLKKIQKK 178
>UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whole
genome shotgun sequence; n=2; Coelomata|Rep: Chromosome
undetermined SCAF13783, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 149
Score = 73.3 bits (172), Expect = 5e-12
Identities = 31/34 (91%), Positives = 34/34 (100%)
Frame = +3
Query: 513 ACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 614
AC+ASRPGQCGRADGYILEGKELEFYLRKIK+K+
Sbjct: 114 ACIASRPGQCGRADGYILEGKELEFYLRKIKAKK 147
>UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitozoon
cuniculi|Rep: Ribosomal protein S8 - Encephalitozoon
cuniculi
Length = 173
Score = 72.5 bits (170), Expect = 8e-12
Identities = 35/83 (42%), Positives = 51/83 (61%)
Frame = +2
Query: 2 GISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLD 181
GI+ HKRR TG K RKKR G ++T++G +++ VR RGGN KY+ALRLD
Sbjct: 2 GINHRGDHKRRKTGAKAVISRKKRNNRAGSQPSSTKIGERKVTPVRVRGGNRKYKALRLD 61
Query: 182 TGNFSWGSECSTRKTRIIDVVYN 250
G+F + + R +++ VVY+
Sbjct: 62 MGHFKFITTGKFRMAKLLQVVYH 84
Score = 44.4 bits (100), Expect = 0.002
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +3
Query: 501 GALLACVASRPGQCGRADGYILEGKELEFYLRKIKSK 611
G L A + SRPGQ G A G++L+G EL+FY K K
Sbjct: 131 GHLYAIITSRPGQVGMAQGHVLQGDELKFYADKFNKK 167
Score = 33.1 bits (72), Expect = 6.0
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +1
Query: 256 NNELVRTKTLVKNAIVVVDATPFR 327
+NELVRT TL K+++V + A PF+
Sbjct: 87 SNELVRTNTLTKSSVVKISAEPFK 110
>UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03085 protein - Schistosoma
japonicum (Blood fluke)
Length = 120
Score = 65.3 bits (152), Expect = 1e-09
Identities = 26/39 (66%), Positives = 35/39 (89%)
Frame = +3
Query: 501 GALLACVASRPGQCGRADGYILEGKELEFYLRKIKSKRA 617
G LLAC++S+PGQ GRADGY+ EGKELEF+ +K+K+K+A
Sbjct: 81 GRLLACISSKPGQVGRADGYLFEGKELEFFSKKLKAKKA 119
Score = 58.0 bits (134), Expect = 2e-07
Identities = 36/82 (43%), Positives = 48/82 (58%), Gaps = 9/82 (10%)
Frame = +1
Query: 289 KNAIVVVDATPFRQWYESHYTLPLGR-----KKGAKLT--EAEEAIINKKRSQKTARKYL 447
K+AIV + PFRQW+E+ Y LG KKG +T EE + KKRS+ +K+
Sbjct: 1 KSAIVQIGGAPFRQWFEAPYLKELGPPKVVCKKGPSVTPENPEEDFLLKKRSKSALKKFE 60
Query: 448 ARQRL--AKVEGALEEQFHTGR 507
RQ L A VE +L+E+F TGR
Sbjct: 61 TRQALPQANVEESLKEEFVTGR 82
>UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7;
Archaea|Rep: 30S ribosomal protein S8e - Picrophilus
torridus
Length = 125
Score = 64.9 bits (151), Expect = 2e-09
Identities = 35/84 (41%), Positives = 49/84 (58%)
Frame = +2
Query: 29 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSE 208
R+ +GGK P KR+YELGR TRLG + + +RS GGN+K+ LR D N +
Sbjct: 10 RKPSGGKLRPNHSKRRYELGREPTLTRLGDRELRKIRSYGGNSKFALLRCDYANVYNPKD 69
Query: 209 CSTRKTRIIDVVYNALTMNWCVQR 280
+TRK +I V N+ ++ VQR
Sbjct: 70 KTTRKVKINTVKENSADPHY-VQR 92
>UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella
natans|Rep: Ribosomal protein S8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 176
Score = 61.3 bits (142), Expect = 2e-08
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Frame = +2
Query: 26 KRRATGGKRAPIRKKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSWG 202
K++ TGGK+ I KK+ + G NT L I R RGGN K++A+ L G+F W
Sbjct: 3 KKKLTGGKKKKISKKKNHSKGNNPTNTVLRRANFIKMTRVRGGNFKFKAISLGKGSFQWK 62
Query: 203 SECSTRKTRIIDVVYNALTMNWCVQRPLSR 292
+ ++ ++I+ V+YN + +R LS+
Sbjct: 63 TMQLSKNSKILSVLYNQANLKLVQKRNLSK 92
>UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5;
Archaea|Rep: 30S ribosomal protein S8e - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 125
Score = 56.4 bits (130), Expect = 6e-07
Identities = 31/88 (35%), Positives = 51/88 (57%)
Frame = +2
Query: 29 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSE 208
R+ +GG+ + K++ E+GR A T +G +R VR+ GGN K RALRL+ S +
Sbjct: 9 RKPSGGRYHTSQGKKRTEIGRAPAETHIGEERRRIVRTFGGNQKVRALRLEYATVSNPAT 68
Query: 209 CSTRKTRIIDVVYNALTMNWCVQRPLSR 292
T+KT+I V N+ N+ ++ L++
Sbjct: 69 GETKKTKIEAVEANSADPNYVRRKLLTK 96
>UniRef50_Q9HJD0 Cluster: 30S ribosomal protein S8e; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S8e -
Thermoplasma acidophilum
Length = 127
Score = 55.2 bits (127), Expect = 1e-06
Identities = 34/85 (40%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +2
Query: 29 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSV-RSRGGNTKYRALRLDTGNFSWGS 205
++ATGG RKKR++ELGR T+LG + V R+ GGNTK +T N S
Sbjct: 10 KKATGGSLKQSRKKRRFELGREPTLTKLGTKTERKVIRTMGGNTKVILFTAETANVYDAS 69
Query: 206 ECSTRKTRIIDVVYNALTMNWCVQR 280
E +K +II V N ++ VQR
Sbjct: 70 EKKIKKAKIITVKANPANSHY-VQR 93
>UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_54, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 110
Score = 48.8 bits (111), Expect = 1e-04
Identities = 33/82 (40%), Positives = 46/82 (56%)
Frame = +1
Query: 262 ELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARK 441
ELVRT+TLVKNAI+ Q Y HY L +G KK A T ++ +++ RK
Sbjct: 31 ELVRTQTLVKNAII--------QRYLQHYGLDIGCKKKASTTPRKK----ERKGNHVVRK 78
Query: 442 YLARQRLAKVEGALEEQFHTGR 507
RQ+ K++ +EEQF +GR
Sbjct: 79 LEKRQQDHKLDPHIEEQFGSGR 100
>UniRef50_Q0W1L5 Cluster: 30S ribosomal protein S8e; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8e -
Uncultured methanogenic archaeon RC-I
Length = 125
Score = 48.0 bits (109), Expect = 2e-04
Identities = 26/80 (32%), Positives = 40/80 (50%)
Frame = +2
Query: 29 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSE 208
R+ATGG+ R KRK+ELGR +G Q++ + G +K R L+ D N +
Sbjct: 9 RKATGGRLRLNRSKRKFELGRDFTIPVIGAQKLKVLNVTGNGSKVRVLKSDVVNVTDPKT 68
Query: 209 CSTRKTRIIDVVYNALTMNW 268
T+K ++ V N N+
Sbjct: 69 GKTQKVKMTTVTENPANKNY 88
>UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S8e -
Methanopyrus kandleri
Length = 133
Score = 47.6 bits (108), Expect = 3e-04
Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Frame = +2
Query: 20 WHKR---RATGGKRAPIRKKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDT- 184
WH R + TGG+ P RKKRK+E+G P T +G +R + R GGN K + L+ T
Sbjct: 4 WHGRSLRKPTGGRIRPHRKKRKFEMGNPPTETLVGEERKLKERRGMGGNVK-KGLKFATH 62
Query: 185 GNFSWGSECSTRKTRIIDVVYN 250
N + + RI +VV N
Sbjct: 63 ANVADPETGEVKCVRIEEVVKN 84
>UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6;
Archaea|Rep: 30S ribosomal protein S8e - Pyrococcus
horikoshii
Length = 127
Score = 45.6 bits (103), Expect = 0.001
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +2
Query: 29 RRATGGKRAPIRKKRKYELGRPAANTRLGPQ-RIHSVRSRGGNTKYRALRLDTGNFSWGS 205
++ +GG+ RKKRK ELGR +NTR+ Q + +R+ GGN K R N +
Sbjct: 10 KKPSGGRIVLARKKRKRELGREPSNTRVAEQDKRKIIRTYGGNRKVRLTAAAYANV-FDK 68
Query: 206 ECSTRKTRIIDVVYN 250
RK RII V+ N
Sbjct: 69 SGKGRKVRIIRVLEN 83
>UniRef50_Q980W3 Cluster: 30S ribosomal protein S8e; n=4;
Archaea|Rep: 30S ribosomal protein S8e - Sulfolobus
solfataricus
Length = 133
Score = 44.8 bits (101), Expect = 0.002
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +2
Query: 29 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIH-SVRSRGGNTKYRALRLDTGNFSWGS 205
R+ TGG + R KRKYE+G P T L + I R+ GGN K R T N +
Sbjct: 10 RKITGGLKGKHRDKRKYEIGNPPTFTTLSAEDIRIKDRTLGGNFKVRLKYTTTANVLDPA 69
Query: 206 ECSTRKTRIIDVV 244
+ +K +I++++
Sbjct: 70 TNTAKKVKILEIL 82
>UniRef50_A0RXG5 Cluster: Ribosomal protein S8E; n=2;
Thermoprotei|Rep: Ribosomal protein S8E - Cenarchaeum
symbiosum
Length = 129
Score = 40.7 bits (91), Expect = 0.030
Identities = 23/73 (31%), Positives = 37/73 (50%)
Frame = +2
Query: 32 RATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSEC 211
+ TGG+R P+R +RKYE+ R G Q + + RG TK +D N +
Sbjct: 12 KLTGGRRHPLRTRRKYEIDRYPNEALSGAQETVTRKVRGKRTKTALKTIDFVNLA-VQGA 70
Query: 212 STRKTRIIDVVYN 250
+K++I+ V+ N
Sbjct: 71 KVKKSKIVKVLEN 83
>UniRef50_Q9YDY0 Cluster: 30S ribosomal protein S8e; n=3;
Desulfurococcales|Rep: 30S ribosomal protein S8e -
Aeropyrum pernix
Length = 136
Score = 40.7 bits (91), Expect = 0.030
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Frame = +2
Query: 26 KRRATGGKRAPIRK-KRKYELGRPAANTRLG---PQRIHSVRSRGGNTKYRALRLDTGNF 193
K++ +GGKR K KRKY GRP T L + VR+RGG+ K +A ++
Sbjct: 9 KKKPSGGKRRYYYKVKRKYAAGRPPTYTTLSAAEEEERKPVRARGGSYKIKAKKVAFAVV 68
Query: 194 SWGSECSTRKTRIIDVV 244
S RK RI+ +V
Sbjct: 69 SNPKTGEARKARILRIV 85
>UniRef50_P61300 Cluster: 30S ribosomal protein S8e; n=5;
Methanococcus|Rep: 30S ribosomal protein S8e -
Methanococcus maripaludis
Length = 128
Score = 38.3 bits (85), Expect = 0.16
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +2
Query: 26 KRRATGGKRAPIRKKRKYELGRPAANTRLGPQ-RIHSVRSRGGNTKYRALRLDTGNFSWG 202
+R +TG K KK K E+GRPAA T++ + + VR RG N K + + + N
Sbjct: 9 RRLSTGAKVWRAAKKHKREMGRPAAETQVSDKIKRKIVRCRGANLKVKLEKTNYANVFDQ 68
Query: 203 SECSTRKTRIIDVVYN 250
+ +K + +V+ N
Sbjct: 69 ANKVCKKVVVTNVIDN 84
>UniRef50_Q2W531 Cluster: TPR repeat; n=3; Magnetospirillum|Rep: TPR
repeat - Magnetospirillum magneticum (strain AMB-1 /
ATCC 700264)
Length = 556
Score = 36.7 bits (81), Expect = 0.49
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +2
Query: 35 ATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSR 145
A G +RAP K YE R AA TRL P + ++R R
Sbjct: 268 ALGAERAPANLKANYEKERDAAGTRLSPAELEALRGR 304
>UniRef50_Q8ZTB8 Cluster: 30S ribosomal protein S8e; n=6;
Archaea|Rep: 30S ribosomal protein S8e - Pyrobaculum
aerophilum
Length = 131
Score = 36.3 bits (80), Expect = 0.65
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +2
Query: 29 RRATGGKRAPIRKKRKYEL-GRPAANTRLGPQRIHSV-RSRGGNTKYRALRLDTGNFSWG 202
++ +GGK+ +RK +K L G P +LG V R RGGN K R N
Sbjct: 13 KKPSGGKKRKVRKTKKKALGGGPPQIPKLGENDTRIVERVRGGNLKVRLREAKFANVYIP 72
Query: 203 SECSTRKTRIIDVV 244
E + K +II ++
Sbjct: 73 KERKSVKAKIISII 86
>UniRef50_UPI0000DB7956 Cluster: PREDICTED: similar to Deformed
CG2189-PA; n=1; Apis mellifera|Rep: PREDICTED: similar
to Deformed CG2189-PA - Apis mellifera
Length = 284
Score = 34.7 bits (76), Expect = 2.0
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = +3
Query: 15 ITGISEGPPVGNVRPYARRGSMS*GVPLQTPGSVLSVSTPFVHVVEILS 161
+TG+ EGPP G + GS+S P +P + L VS P +H I S
Sbjct: 230 VTGMMEGPPGGGPLGHIASGSISPLAPATSPSATLQVSAP-IHPPPIKS 277
>UniRef50_A7D873 Cluster: Exodeoxyribonuclease III Xth; n=2;
Methylobacterium extorquens PA1|Rep:
Exodeoxyribonuclease III Xth - Methylobacterium
extorquens PA1
Length = 344
Score = 34.7 bits (76), Expect = 2.0
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +2
Query: 32 RATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL-DTGNFSWGSE 208
R G+R P+R++ + E RP A+ R P H+ R+R G R L + + F + S
Sbjct: 7 RGLAGRRGPLRRRGRRERLRPLADDR-RPALRHAARARPGGGGGRGLTVCEARRFRYRSG 65
Query: 209 CSTRKTRIIDVVYNALTMN 265
S ++ I V T N
Sbjct: 66 SSRHASQAIPVRLTVTTWN 84
>UniRef50_Q2NEU6 Cluster: 30S ribosomal protein S8e; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 30S ribosomal
protein S8e - Methanosphaera stadtmanae (strain DSM
3091)
Length = 126
Score = 34.7 bits (76), Expect = 2.0
Identities = 21/74 (28%), Positives = 35/74 (47%)
Frame = +2
Query: 29 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSE 208
R+ +G + + KR E GR A TR+G + + +RG TK RA N +
Sbjct: 10 RKPSGARSRRNKNKRNAEFGRNPAETRIGDEVKKEIVARGNCTKTRATVAKRINVIDPKD 69
Query: 209 CSTRKTRIIDVVYN 250
S++ ++ V+ N
Sbjct: 70 NSSKNVEMLTVLEN 83
>UniRef50_UPI0000F32D0C Cluster: Zinc finger CCCH domain-containing
protein 6.; n=1; Bos taurus|Rep: Zinc finger CCCH
domain-containing protein 6. - Bos Taurus
Length = 770
Score = 34.3 bits (75), Expect = 2.6
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +3
Query: 12 GITGISEGPPVGNVRPYARRGSMS*GVPLQTPGSVLS 122
G S GP G + PYA + S S G+PL TPGSVLS
Sbjct: 595 GAVPSSSGP--GALPPYAPKLSSSTGLPLGTPGSVLS 629
>UniRef50_A7F1W3 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 622
Score = 33.5 bits (73), Expect = 4.6
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -2
Query: 288 DKGLCTHQFIVNALYTTSMIRVLRVEHSDPQEKLPVS 178
D GL + + + +Y T I +R EH DP++ LP S
Sbjct: 302 DLGLADYNLLFDTIYATPPIARVRSEHEDPRDNLPDS 338
>UniRef50_UPI0000F2B19F Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 33.1 bits (72), Expect = 6.0
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +1
Query: 385 TEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQF 495
T EE I+NKK S+K +KY ++ AK+ L E F
Sbjct: 105 TPEEEEILNKKHSKKIQKKYEEWKKKAKISLLLREHF 141
>UniRef50_Q9VL72 Cluster: CG5899-PA, isoform A; n=5; Diptera|Rep:
CG5899-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 844
Score = 33.1 bits (72), Expect = 6.0
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 262 ELVRTKTLV-KNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRS 423
EL KTL K A+ ++D PF W + L R G L A+E +INK+ +
Sbjct: 198 ELQSVKTLSEKKALAIIDVRPFSDWSDLRQKLESIRMSGDLLNYAQE-LINKQNT 251
>UniRef50_Q8TN82 Cluster: Predicted protein; n=1; Methanosarcina
acetivorans|Rep: Predicted protein - Methanosarcina
acetivorans
Length = 90
Score = 33.1 bits (72), Expect = 6.0
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 334 YESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTA-RKYLARQRLAKVEGALEE 489
Y + +TL R + A EA E ++ K +K A K LA+ L K+EG LEE
Sbjct: 31 YRNIWTLNGSRNRSATSKEACEKLLAKNCLRKIACEKLLAKNCLRKIEGLLEE 83
>UniRef50_UPI0000DD7BBA Cluster: PREDICTED: hypothetical protein;
n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 294
Score = 32.7 bits (71), Expect = 8.0
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +1
Query: 412 KKRSQKTARKYLARQRLAKVEGALEEQFHTGRCWLAWRVAQVSVVAP 552
++ ++ R+ L R+R + EG LE + GRCWL + A + P
Sbjct: 177 REPGEELGRRLLRRRRRREPEGELESERGDGRCWLTLQRAAPATGVP 223
>UniRef50_Q89D60 Cluster: Blr7583 protein; n=1; Bradyrhizobium
japonicum|Rep: Blr7583 protein - Bradyrhizobium
japonicum
Length = 261
Score = 32.7 bits (71), Expect = 8.0
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 298 IVVVDATPFRQWYESHYTLPLGRKK 372
++ +D PFR+W + TLPLG K
Sbjct: 22 VIAIDGDPFREWQRTSRTLPLGEVK 46
>UniRef50_Q9VAU6 Cluster: CG9986-PA; n=5; Diptera|Rep: CG9986-PA -
Drosophila melanogaster (Fruit fly)
Length = 535
Score = 32.7 bits (71), Expect = 8.0
Identities = 18/76 (23%), Positives = 40/76 (52%)
Frame = +1
Query: 382 LTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRCWLAWRVAQVSVVAPMVT 561
+T E I N Q T + Y+ ++ +++E + Q + R W+ +V+Q+ V+P+ T
Sbjct: 186 ITTTSEDINNLLAQQYTTQNYVRKRYESELEAMMGHQKNEYRNWITSQVSQMFQVSPVAT 245
Query: 562 S*KAKNSSSI*ERSSL 609
++S + ++ S+
Sbjct: 246 PLGNRSSMFVSQQPSM 261
>UniRef50_A5E7M6 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 620
Score = 32.7 bits (71), Expect = 8.0
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +1
Query: 313 ATPFRQWYESHYTLPLGRKKGAKLTEAE 396
ATPF Q + +HY L RKKG K+ E E
Sbjct: 374 ATPFYQTFLAHYIWQLKRKKGKKMKEDE 401
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 639,303,249
Number of Sequences: 1657284
Number of extensions: 12598341
Number of successful extensions: 35768
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 34520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35746
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49586781480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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