Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10574
(658 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8 prot... 160 3e-39
BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8 pr... 160 3e-39
AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8 pr... 160 3e-39
AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8 pr... 160 3e-39
AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8 pr... 128 2e-29
BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal pr... 77 6e-14
AF061324-1|AAC16058.1| 1549|Homo sapiens sulfonylurea receptor 2... 31 2.7
AF061323-1|AAC16057.1| 1549|Homo sapiens sulfonylurea receptor 2... 31 2.7
CR457284-1|CAG33565.1| 201|Homo sapiens FLJ11749 protein. 31 4.8
BC010108-1|AAH10108.1| 201|Homo sapiens chromatin modifying pro... 31 4.8
AY329087-1|AAQ91196.1| 201|Homo sapiens VPS20 protein. 31 4.8
AK021811-1|BAB13901.1| 201|Homo sapiens protein ( Homo sapiens ... 31 4.8
>X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 160 bits (389), Expect = 3e-39
Identities = 71/84 (84%), Positives = 76/84 (90%)
Frame = +2
Query: 2 GISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLD 181
GISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD
Sbjct: 2 GISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLD 61
Query: 182 TGNFSWGSECSTRKTRIIDVVYNA 253
GNFSWGSEC TRKTRIIDVVYNA
Sbjct: 62 VGNFSWGSECCTRKTRIIDVVYNA 85
Score = 128 bits (309), Expect = 2e-29
Identities = 58/84 (69%), Positives = 69/84 (82%)
Frame = +1
Query: 256 NNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTA 435
NNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K
Sbjct: 87 NNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQ 146
Query: 436 RKYLARQRLAKVEGALEEQFHTGR 507
+KY R++ AK+ LEEQF G+
Sbjct: 147 KKYDERKKNAKISSLLEEQFQQGK 170
Score = 77.0 bits (181), Expect = 6e-14
Identities = 32/38 (84%), Positives = 37/38 (97%)
Frame = +3
Query: 501 GALLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 614
G LLAC+ASRPGQCGRADGY+LEGKELEFYLRKIK+++
Sbjct: 169 GKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARK 206
>BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 160 bits (389), Expect = 3e-39
Identities = 71/84 (84%), Positives = 76/84 (90%)
Frame = +2
Query: 2 GISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLD 181
GISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD
Sbjct: 2 GISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLD 61
Query: 182 TGNFSWGSECSTRKTRIIDVVYNA 253
GNFSWGSEC TRKTRIIDVVYNA
Sbjct: 62 VGNFSWGSECCTRKTRIIDVVYNA 85
Score = 128 bits (309), Expect = 2e-29
Identities = 58/84 (69%), Positives = 69/84 (82%)
Frame = +1
Query: 256 NNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTA 435
NNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K
Sbjct: 87 NNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQ 146
Query: 436 RKYLARQRLAKVEGALEEQFHTGR 507
+KY R++ AK+ LEEQF G+
Sbjct: 147 KKYDERKKNAKISSLLEEQFQQGK 170
Score = 77.0 bits (181), Expect = 6e-14
Identities = 32/38 (84%), Positives = 37/38 (97%)
Frame = +3
Query: 501 GALLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 614
G LLAC+ASRPGQCGRADGY+LEGKELEFYLRKIK+++
Sbjct: 169 GKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARK 206
>AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 160 bits (389), Expect = 3e-39
Identities = 71/84 (84%), Positives = 76/84 (90%)
Frame = +2
Query: 2 GISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLD 181
GISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD
Sbjct: 2 GISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLD 61
Query: 182 TGNFSWGSECSTRKTRIIDVVYNA 253
GNFSWGSEC TRKTRIIDVVYNA
Sbjct: 62 VGNFSWGSECCTRKTRIIDVVYNA 85
Score = 128 bits (309), Expect = 2e-29
Identities = 58/84 (69%), Positives = 69/84 (82%)
Frame = +1
Query: 256 NNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTA 435
NNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K
Sbjct: 87 NNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQ 146
Query: 436 RKYLARQRLAKVEGALEEQFHTGR 507
+KY R++ AK+ LEEQF G+
Sbjct: 147 KKYDERKKNAKISSLLEEQFQQGK 170
Score = 77.0 bits (181), Expect = 6e-14
Identities = 32/38 (84%), Positives = 37/38 (97%)
Frame = +3
Query: 501 GALLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 614
G LLAC+ASRPGQCGRADGY+LEGKELEFYLRKIK+++
Sbjct: 169 GKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARK 206
>AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 160 bits (389), Expect = 3e-39
Identities = 71/84 (84%), Positives = 76/84 (90%)
Frame = +2
Query: 2 GISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLD 181
GISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD
Sbjct: 2 GISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLD 61
Query: 182 TGNFSWGSECSTRKTRIIDVVYNA 253
GNFSWGSEC TRKTRIIDVVYNA
Sbjct: 62 VGNFSWGSECCTRKTRIIDVVYNA 85
Score = 128 bits (309), Expect = 2e-29
Identities = 58/84 (69%), Positives = 69/84 (82%)
Frame = +1
Query: 256 NNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTA 435
NNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K
Sbjct: 87 NNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQ 146
Query: 436 RKYLARQRLAKVEGALEEQFHTGR 507
+KY R++ AK+ LEEQF G+
Sbjct: 147 KKYDERKKNAKISSLLEEQFQQGK 170
Score = 77.0 bits (181), Expect = 6e-14
Identities = 32/38 (84%), Positives = 37/38 (97%)
Frame = +3
Query: 501 GALLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 614
G LLAC+ASRPGQCGRADGY+LEGKELEFYLRKIK+++
Sbjct: 169 GKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARK 206
>AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8
protein.
Length = 188
Score = 128 bits (309), Expect = 2e-29
Identities = 58/84 (69%), Positives = 69/84 (82%)
Frame = +1
Query: 256 NNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTA 435
NNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K
Sbjct: 67 NNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQ 126
Query: 436 RKYLARQRLAKVEGALEEQFHTGR 507
+KY R++ AK+ LEEQF G+
Sbjct: 127 KKYDERKKNAKISSLLEEQFQQGK 150
Score = 100 bits (239), Expect = 5e-21
Identities = 54/84 (64%), Positives = 59/84 (70%)
Frame = +2
Query: 2 GISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLD 181
GISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGG
Sbjct: 2 GISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGG---------- 51
Query: 182 TGNFSWGSECSTRKTRIIDVVYNA 253
C TRKTRIIDVVYNA
Sbjct: 52 ---------C-TRKTRIIDVVYNA 65
Score = 77.0 bits (181), Expect = 6e-14
Identities = 32/38 (84%), Positives = 37/38 (97%)
Frame = +3
Query: 501 GALLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 614
G LLAC+ASRPGQCGRADGY+LEGKELEFYLRKIK+++
Sbjct: 149 GKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARK 186
>BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal
protein S8 protein.
Length = 80
Score = 77.0 bits (181), Expect = 6e-14
Identities = 32/38 (84%), Positives = 37/38 (97%)
Frame = +3
Query: 501 GALLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 614
G LLAC+ASRPGQCGRADGY+LEGKELEFYLRKIK+++
Sbjct: 41 GKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARK 78
Score = 47.6 bits (108), Expect = 4e-05
Identities = 22/42 (52%), Positives = 29/42 (69%)
Frame = +1
Query: 382 LTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGR 507
LT EE I+NKKRS+K +KY R++ AK+ LEEQF G+
Sbjct: 1 LTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGK 42
>AF061324-1|AAC16058.1| 1549|Homo sapiens sulfonylurea receptor 2B
protein.
Length = 1549
Score = 31.5 bits (68), Expect = 2.7
Identities = 27/93 (29%), Positives = 37/93 (39%), Gaps = 7/93 (7%)
Frame = +2
Query: 5 ISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIH-------SVRSRGGNTKY 163
I D W TG P +K+ +P R P R H + R R T+
Sbjct: 614 IGDDSWR----TGESSLPFESCKKHTGVQPKTINRKQPGRYHLDSYEQSTRRLRPAETED 669
Query: 164 RALRLDTGNFSWGSECSTRKTRIIDVVYNALTM 262
A+++ G FSWGS +T I + LTM
Sbjct: 670 IAIKVTNGYFSWGSGLATLSNIDIRIPTGQLTM 702
>AF061323-1|AAC16057.1| 1549|Homo sapiens sulfonylurea receptor 2A
protein.
Length = 1549
Score = 31.5 bits (68), Expect = 2.7
Identities = 27/93 (29%), Positives = 37/93 (39%), Gaps = 7/93 (7%)
Frame = +2
Query: 5 ISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIH-------SVRSRGGNTKY 163
I D W TG P +K+ +P R P R H + R R T+
Sbjct: 614 IGDDSWR----TGESSLPFESCKKHTGVQPKTINRKQPGRYHLDSYEQSTRRLRPAETED 669
Query: 164 RALRLDTGNFSWGSECSTRKTRIIDVVYNALTM 262
A+++ G FSWGS +T I + LTM
Sbjct: 670 IAIKVTNGYFSWGSGLATLSNIDIRIPTGQLTM 702
>CR457284-1|CAG33565.1| 201|Homo sapiens FLJ11749 protein.
Length = 201
Score = 30.7 bits (66), Expect = 4.8
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +1
Query: 361 GRKKGAKLTEAEEAIINKKRSQKTARKYLAR--QRLAKVEGALEEQFHTGR 507
GRKK +++TE ++AI+ K+ + R+Y R Q+L + + GR
Sbjct: 6 GRKKQSRVTEQDKAILQLKQQRDKLRQYQKRIAQQLERERALARQLLRDGR 56
>BC010108-1|AAH10108.1| 201|Homo sapiens chromatin modifying
protein 6 protein.
Length = 201
Score = 30.7 bits (66), Expect = 4.8
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +1
Query: 361 GRKKGAKLTEAEEAIINKKRSQKTARKYLAR--QRLAKVEGALEEQFHTGR 507
GRKK +++TE ++AI+ K+ + R+Y R Q+L + + GR
Sbjct: 6 GRKKQSRVTEQDKAILQLKQQRDKLRQYQKRIAQQLERERALARQLLRDGR 56
>AY329087-1|AAQ91196.1| 201|Homo sapiens VPS20 protein.
Length = 201
Score = 30.7 bits (66), Expect = 4.8
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +1
Query: 361 GRKKGAKLTEAEEAIINKKRSQKTARKYLAR--QRLAKVEGALEEQFHTGR 507
GRKK +++TE ++AI+ K+ + R+Y R Q+L + + GR
Sbjct: 6 GRKKQSRVTEQDKAILQLKQQRDKLRQYQKRIAQQLERERALARQLLRDGR 56
>AK021811-1|BAB13901.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ11749 fis, clone HEMBA1005558, weakly similar to
NUCLEAR PROTEIN SNF7. ).
Length = 201
Score = 30.7 bits (66), Expect = 4.8
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +1
Query: 361 GRKKGAKLTEAEEAIINKKRSQKTARKYLAR--QRLAKVEGALEEQFHTGR 507
GRKK +++TE ++AI+ K+ + R+Y R Q+L + + GR
Sbjct: 6 GRKKQSRVTEQDKAILQLKQQRDKLRQYQKRIAQQLERERALARQLLRDGR 56
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,951,638
Number of Sequences: 237096
Number of extensions: 1987787
Number of successful extensions: 4470
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4470
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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