Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10570
(705 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 165 2e-41
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 165 3e-41
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 165 3e-41
SB_56| Best HMM Match : Actin (HMM E-Value=0) 165 3e-41
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 165 4e-41
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 163 1e-40
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 143 1e-34
SB_54| Best HMM Match : Actin (HMM E-Value=0) 79 3e-15
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 5e-11
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 55 5e-08
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 54 9e-08
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 36 0.024
SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.52
SB_48528| Best HMM Match : Extensin_2 (HMM E-Value=1) 29 3.7
SB_25899| Best HMM Match : Ribonuc_2-5A (HMM E-Value=0) 29 4.9
SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19) 29 4.9
SB_53874| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_12796| Best HMM Match : Radical_SAM (HMM E-Value=8.9e-24) 28 8.5
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 165 bits (402), Expect = 2e-41
Identities = 76/83 (91%), Positives = 81/83 (97%)
Frame = -1
Query: 519 LVRHTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 340
L +TV+SGGTTMYPG+ADRMQKEI+ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 267 LYANTVMSGGTTMYPGLADRMQKEISALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 326
Query: 339 QQMWISKQEYDESGPSIVHRKCF 271
QQMWISKQEYDESGP+IVHRKCF
Sbjct: 327 QQMWISKQEYDESGPAIVHRKCF 349
Score = 133 bits (321), Expect = 2e-31
Identities = 61/65 (93%), Positives = 63/65 (96%)
Frame = -2
Query: 704 ASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIR 525
ASSSS+EKSYELPDGQVITIGNERFRCPEAL QPSFLGME+ GIHETTYNSIMKCDVDIR
Sbjct: 205 ASSSSIEKSYELPDGQVITIGNERFRCPEALLQPSFLGMESSGIHETTYNSIMKCDVDIR 264
Query: 524 KDLYA 510
KDLYA
Sbjct: 265 KDLYA 269
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 165 bits (401), Expect = 3e-41
Identities = 77/83 (92%), Positives = 80/83 (96%)
Frame = -1
Query: 519 LVRHTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 340
L +TVLSGGTTMYPGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 256 LYANTVLSGGTTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTF 315
Query: 339 QQMWISKQEYDESGPSIVHRKCF 271
QQMWISKQEYDESGP+IVHRKCF
Sbjct: 316 QQMWISKQEYDESGPAIVHRKCF 338
Score = 136 bits (328), Expect = 2e-32
Identities = 62/65 (95%), Positives = 64/65 (98%)
Frame = -2
Query: 704 ASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIR 525
ASSSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIR
Sbjct: 194 ASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIR 253
Query: 524 KDLYA 510
KDLYA
Sbjct: 254 KDLYA 258
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 165 bits (401), Expect = 3e-41
Identities = 77/83 (92%), Positives = 80/83 (96%)
Frame = -1
Query: 519 LVRHTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 340
L +TVLSGG+TMYPGIADRMQKEIT+LAP TMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 294 LYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTF 353
Query: 339 QQMWISKQEYDESGPSIVHRKCF 271
QQMWISKQEYDESGPSIVHRKCF
Sbjct: 354 QQMWISKQEYDESGPSIVHRKCF 376
Score = 136 bits (328), Expect = 2e-32
Identities = 62/65 (95%), Positives = 64/65 (98%)
Frame = -2
Query: 704 ASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIR 525
ASSSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIR
Sbjct: 232 ASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIR 291
Query: 524 KDLYA 510
KDLYA
Sbjct: 292 KDLYA 296
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 165 bits (401), Expect = 3e-41
Identities = 77/83 (92%), Positives = 80/83 (96%)
Frame = -1
Query: 519 LVRHTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 340
L +TVLSGG+TMYPGIADRMQKEIT+LAP TMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 293 LYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTF 352
Query: 339 QQMWISKQEYDESGPSIVHRKCF 271
QQMWISKQEYDESGPSIVHRKCF
Sbjct: 353 QQMWISKQEYDESGPSIVHRKCF 375
Score = 136 bits (328), Expect = 2e-32
Identities = 62/65 (95%), Positives = 64/65 (98%)
Frame = -2
Query: 704 ASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIR 525
ASSSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIR
Sbjct: 231 ASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIR 290
Query: 524 KDLYA 510
KDLYA
Sbjct: 291 KDLYA 295
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 165 bits (400), Expect = 4e-41
Identities = 77/83 (92%), Positives = 80/83 (96%)
Frame = -1
Query: 519 LVRHTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 340
L +TVLSGG+TMYPGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 294 LYANTVLSGGSTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTF 353
Query: 339 QQMWISKQEYDESGPSIVHRKCF 271
QQMWISKQEYDESGPSIVHRKCF
Sbjct: 354 QQMWISKQEYDESGPSIVHRKCF 376
Score = 136 bits (328), Expect = 2e-32
Identities = 62/65 (95%), Positives = 64/65 (98%)
Frame = -2
Query: 704 ASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIR 525
ASSSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIR
Sbjct: 232 ASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIR 291
Query: 524 KDLYA 510
KDLYA
Sbjct: 292 KDLYA 296
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 163 bits (396), Expect = 1e-40
Identities = 76/83 (91%), Positives = 80/83 (96%)
Frame = -1
Query: 519 LVRHTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 340
L +TVLSGG+TM+PGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 293 LYANTVLSGGSTMFPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTF 352
Query: 339 QQMWISKQEYDESGPSIVHRKCF 271
QQMWISKQEYDESGPSIVHRKCF
Sbjct: 353 QQMWISKQEYDESGPSIVHRKCF 375
Score = 134 bits (325), Expect = 5e-32
Identities = 61/65 (93%), Positives = 64/65 (98%)
Frame = -2
Query: 704 ASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIR 525
A+SSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIR
Sbjct: 231 AASSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIR 290
Query: 524 KDLYA 510
KDLYA
Sbjct: 291 KDLYA 295
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 143 bits (347), Expect = 1e-34
Identities = 65/83 (78%), Positives = 74/83 (89%)
Frame = -1
Query: 519 LVRHTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 340
L + VLSGG+TM+PGIADRMQKEI LA ++MK+K+IAPPERKYSVWIGGSILASLSTF
Sbjct: 67 LYSNCVLSGGSTMFPGIADRMQKEIAMLANASMKVKVIAPPERKYSVWIGGSILASLSTF 126
Query: 339 QQMWISKQEYDESGPSIVHRKCF 271
QQMWI+K+EY E GP IVHRKCF
Sbjct: 127 QQMWIAKEEYHEYGPPIVHRKCF 149
Score = 118 bits (285), Expect = 4e-27
Identities = 53/65 (81%), Positives = 59/65 (90%)
Frame = -2
Query: 704 ASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIR 525
A+S LEK+YELPDGQVI+IGNERFRCPEA+FQP+FLGMEA GIHE YN IMKCDVDIR
Sbjct: 5 ANSPILEKTYELPDGQVISIGNERFRCPEAMFQPAFLGMEAPGIHEAIYNCIMKCDVDIR 64
Query: 524 KDLYA 510
KDLY+
Sbjct: 65 KDLYS 69
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 79.0 bits (186), Expect = 3e-15
Identities = 35/63 (55%), Positives = 44/63 (69%)
Frame = -2
Query: 701 SSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRK 522
+S E Y LPDGQ I IG+ERFR E LFQPS LG + GIHE+ + SI KCD+D+R
Sbjct: 2277 TSDDCEAPYMLPDGQSIRIGSERFRAAEPLFQPSLLGRDIDGIHESIFKSIKKCDIDLRA 2336
Query: 521 DLY 513
+L+
Sbjct: 2337 ELF 2339
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 65.3 bits (152), Expect = 5e-11
Identities = 26/59 (44%), Positives = 37/59 (62%)
Frame = -2
Query: 689 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLY 513
L + Y LPDG+V+ + ERF PEALFQP + +E G+ E +N+I D+D R + Y
Sbjct: 240 LVEQYTLPDGRVVKLSGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFY 298
Score = 44.8 bits (101), Expect = 7e-05
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Frame = -1
Query: 603 LVLGYGSLRHPRDHI*LHHEVRRGHP*GLVRHTVLSGGTTMYPGIADRMQKEITA-LAPS 427
+VL GS +P L E+++ L VL G T+ Q +TA
Sbjct: 301 IVLSGGSTMYPGLPSRLEREIKQ-----LYLERVLKGDTSKLSSGMGMEQIPLTADYLLQ 355
Query: 426 TMKIKIIAPPERKYSVWIGGSILAS-LSTFQQMWISKQEYDESG 298
KI+I PP RK+ V++GG++LA + W++++EY+E G
Sbjct: 356 KFKIRIEDPPRRKHMVFMGGAVLADIMKDKDSFWMTRKEYEEKG 399
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 55.2 bits (127), Expect = 5e-08
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 16/103 (15%)
Frame = -1
Query: 519 LVRHTVLSGGTTMYPGIADRMQKEITA----------------LAPSTMKIKIIAPPERK 388
L ++ VLSGG+TM+ R+Q++I + P ++ ++I+ ++
Sbjct: 242 LYKNIVLSGGSTMFRDFGRRLQRDIKRTVDARLKMSETLSGGRIKPKPIETQVISHHMQR 301
Query: 387 YSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THR 259
Y+VW GGS+LAS F + +K +YDE GPSI F HR
Sbjct: 302 YAVWFGGSMLASTPEFYSVCHTKADYDEHGPSICRHNPF-LHR 343
Score = 34.7 bits (76), Expect = 0.074
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -2
Query: 653 ITIGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLY 513
+ + ERF PE F P F + + E N I C +D+R+ LY
Sbjct: 196 VDVAYERFLGPEIFFHPEFSNPDFTTPLSEVVDNVIQNCPIDVRRPLY 243
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 54.4 bits (125), Expect = 9e-08
Identities = 23/61 (37%), Positives = 41/61 (67%), Gaps = 3/61 (4%)
Frame = -1
Query: 522 GLVRHTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIA---PPERKYSVWIGGSILAS 352
GL +++GG T+ G +R+ +E+ + P +M++K+I+ E++++ WIGGSILAS
Sbjct: 170 GLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRLKLISNNSSVEKRFNPWIGGSILAS 229
Query: 351 L 349
L
Sbjct: 230 L 230
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 38.7 bits (86), Expect = 0.005
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 9/81 (11%)
Frame = -1
Query: 519 LVRHTVLSGGTTMYPGIADRMQKEITALAPS--------TMKIKIIAPP-ERKYSVWIGG 367
L + VL GGT M PG R+ +EI L S +K+ PP + W+GG
Sbjct: 77 LAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDKLFIKTVKMHQPPVNANITAWLGG 136
Query: 366 SILASLSTFQQMWISKQEYDE 304
+I SL +++ Y +
Sbjct: 137 AIFGSLEVLADRSTTRERYQQ 157
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 36.3 bits (80), Expect = 0.024
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = -2
Query: 701 SSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 594
++ L K Y LPDGQ+I+IG E E LF+P L
Sbjct: 863 TNEGLTKFYTLPDGQMISIGYECISSMEPLFRPDLL 898
>SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 31.9 bits (69), Expect = 0.52
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -2
Query: 623 PEALFQPSFLGMEACGIHET 564
PE +FQPS LG+E GI ET
Sbjct: 3 PEIIFQPSMLGLEQAGITET 22
>SB_48528| Best HMM Match : Extensin_2 (HMM E-Value=1)
Length = 329
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 693 LPREVLRTSRRSGHHYRKRKIPLPRGSLP 607
LPR ++R HY++ +PLPRG P
Sbjct: 132 LPRGGSPLTKRRESHYQEEGVPLPRGGSP 160
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 693 LPREVLRTSRRSGHHYRKRKIPLPRGSLP 607
LPR ++R HY++ +PLPRG P
Sbjct: 154 LPRGGSPLTKRRESHYQEEGVPLPRGGGP 182
>SB_25899| Best HMM Match : Ribonuc_2-5A (HMM E-Value=0)
Length = 603
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -1
Query: 687 REVLRTSRRSGHHYRKRKIPLPR--GSLPTLVLGYGSLRHPR 568
R++LR R HHYR+ + R G++P + Y + R PR
Sbjct: 521 RDLLRALRNKKHHYRELPDEVKRSLGTIPDEYVRYFTSRFPR 562
>SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19)
Length = 158
Score = 28.7 bits (61), Expect = 4.9
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -3
Query: 655 SSLSETKDSVAQRLSSNPRSWVWK 584
S+ SETK SV +R + + W+W+
Sbjct: 96 STKSETKASVVERFNRTSKEWMWR 119
>SB_53874| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 174
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = -3
Query: 703 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHI 557
HP SR +N P V S + V R+ SN V+ S +PH+
Sbjct: 113 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSN-HPHVYSRVKSNQPHV 160
>SB_12796| Best HMM Match : Radical_SAM (HMM E-Value=8.9e-24)
Length = 676
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = -3
Query: 703 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHI 557
HP SR +N P V S + V R+ SN V+ S +PH+
Sbjct: 615 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSN-HPHVYSRVKSNQPHV 662
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,162,365
Number of Sequences: 59808
Number of extensions: 535870
Number of successful extensions: 1679
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1659
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1853669818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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